| Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
|---|---|
| Accession | NC_004061 |
| Length | 641,454 |
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The map label for this gene is mutY
Identifier: 21672797
GI number: 21672797
Start: 588846
End: 589889
Strand: Direct
Name: mutY
Synonym: BUsg534
Alternate gene names: 21672797
Gene position: 588846-589889 (Clockwise)
Preceding gene: 21672795
Following gene: 21672798
Centisome position: 91.8
GC content: 22.41
Gene sequence:
>1044_bases ATGACAATATATGTTTTTTCGCAATTAATTCTTAATTGGTATCATATAAATGGAAGAAAAAATCTTCCATGGAAAAAAGA TAAAACTTTATATAAAGTTTGGATATCAGAAATAATGTTACAGCAAACAACTGTAAAAACAGCAATTCCTTATTTTAAAA ATTTTATATCAAGATTTCCAAATATACAATCTTTAAATCAAAGTAAATTAGACGATATTTTATGTTTATGGAGTGGACTT GGATATTATAAAAGAGCAGAAAATATTTATAAAACAGTGAAAATTATTAAAGAAGAATTCCAAGAAAAATTTCCAACAGG ATTTTCAGACCTAATTAAATTACCAGGAATTGGAAGATCTACAGCAGGTGCTATTTTATCGTTATCATTAGATTATTTTT TTCCTATTTTAGAAGGAAATGTAAAAAGAATTTTAATGAGATATTACGGTATAATTGGATATGTAACAGAAAAAAAAATA GAACAAAAATTATGGTATTTAATCGAATTAATTACTCCAATTCATAATACTGGTAGCTTTAATCAGGGTATAATGGATAT AGGTGCATTAATTTGTACTCCTAAAAATCCAAAATGTAATTTATGCCCATTAATACAAAAATGCATAGCTTACAAAGAAA AAAATTGGATTAAATATCCATTAAAAAAAAAGAAAAAGATAATACTAGAAAAAAAATCTTGGTTTGTTGTTATCAAATAT CAAAATCAATTTTGGATTGAAAAAAATACAGAAAAAAAAATTTGGAAAAATTTATTTTGTTTTCCAAATTTTGATACTAA AATTAAAACCATAGAATGGTTAAAAAAAAATAAAATCAATATAGATAAAAAACATAAAAAAATTCAATCTTTTTATCATA AATTTAGTCATTTTACACTTCATATTATTCCAATTCTAGTAAATTTATCTTTTTTTAAAAATTTTCAGAATAGTAAAAAA ACAGGAATTTGGTATGATTTGAAAAACACACACGACATAGGTCTTCCTAAACCAGTTCAAAAAATACTAGAAATATTTAA ATAG
Upstream 100 bases:
>100_bases ATACTTTTTTTAATCAAGTAAAAAATATTGAAGTCAATTACATTAAGATAATTTATATCTCATATTTTTTAAAATTTTTA AAATTAAAAAATTCTATAAA
Downstream 100 bases:
>100_bases TTTTTAATAAAAAAGGTTAAAAAAAATGAATCGTATAATTTTTTGTACATTTTTACAAAAAAAATCTGAAGGTCAAGATT ATCCTCCTTATCCAGGAAAA
Product: A/G-specific adenine glycosylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MTIYVFSQLILNWYHINGRKNLPWKKDKTLYKVWISEIMLQQTTVKTAIPYFKNFISRFPNIQSLNQSKLDDILCLWSGL GYYKRAENIYKTVKIIKEEFQEKFPTGFSDLIKLPGIGRSTAGAILSLSLDYFFPILEGNVKRILMRYYGIIGYVTEKKI EQKLWYLIELITPIHNTGSFNQGIMDIGALICTPKNPKCNLCPLIQKCIAYKEKNWIKYPLKKKKKIILEKKSWFVVIKY QNQFWIEKNTEKKIWKNLFCFPNFDTKIKTIEWLKKNKINIDKKHKKIQSFYHKFSHFTLHIIPILVNLSFFKNFQNSKK TGIWYDLKNTHDIGLPKPVQKILEIFK
Sequences:
>Translated_347_residues MTIYVFSQLILNWYHINGRKNLPWKKDKTLYKVWISEIMLQQTTVKTAIPYFKNFISRFPNIQSLNQSKLDDILCLWSGL GYYKRAENIYKTVKIIKEEFQEKFPTGFSDLIKLPGIGRSTAGAILSLSLDYFFPILEGNVKRILMRYYGIIGYVTEKKI EQKLWYLIELITPIHNTGSFNQGIMDIGALICTPKNPKCNLCPLIQKCIAYKEKNWIKYPLKKKKKIILEKKSWFVVIKY QNQFWIEKNTEKKIWKNLFCFPNFDTKIKTIEWLKKNKINIDKKHKKIQSFYHKFSHFTLHIIPILVNLSFFKNFQNSKK TGIWYDLKNTHDIGLPKPVQKILEIFK >Mature_346_residues TIYVFSQLILNWYHINGRKNLPWKKDKTLYKVWISEIMLQQTTVKTAIPYFKNFISRFPNIQSLNQSKLDDILCLWSGLG YYKRAENIYKTVKIIKEEFQEKFPTGFSDLIKLPGIGRSTAGAILSLSLDYFFPILEGNVKRILMRYYGIIGYVTEKKIE QKLWYLIELITPIHNTGSFNQGIMDIGALICTPKNPKCNLCPLIQKCIAYKEKNWIKYPLKKKKKIILEKKSWFVVIKYQ NQFWIEKNTEKKIWKNLFCFPNFDTKIKTIEWLKKNKINIDKKHKKIQSFYHKFSHFTLHIIPILVNLSFFKNFQNSKKT GIWYDLKNTHDIGLPKPVQKILEIFK
Specific function: Adenine glycosylase active on G-A and C-A mispairs
COG id: COG1194
COG function: function code L; A/G-specific DNA glycosylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Nth/MutY family
Homologues:
Organism=Homo sapiens, GI115298648, Length=219, Percent_Identity=34.703196347032, Blast_Score=165, Evalue=7e-41, Organism=Homo sapiens, GI115298654, Length=219, Percent_Identity=34.703196347032, Blast_Score=164, Evalue=8e-41, Organism=Homo sapiens, GI115298652, Length=219, Percent_Identity=34.703196347032, Blast_Score=164, Evalue=8e-41, Organism=Homo sapiens, GI115298650, Length=219, Percent_Identity=34.703196347032, Blast_Score=164, Evalue=8e-41, Organism=Homo sapiens, GI6912520, Length=219, Percent_Identity=34.703196347032, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI190358497, Length=219, Percent_Identity=34.703196347032, Blast_Score=164, Evalue=1e-40, Organism=Escherichia coli, GI1789331, Length=347, Percent_Identity=43.2276657060519, Blast_Score=333, Evalue=1e-92,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MUTY_BUCAP (Q8K926)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660864.1 - ProteinModelPortal: Q8K926 - SMR: Q8K926 - EnsemblBacteria: EBBUCT00000000342 - GeneID: 1005544 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg534 - GeneTree: EBGT00050000007867 - HOGENOM: HBG464473 - OMA: AIMEFGA - ProtClustDB: CLSK493050 - BioCyc: BAPH198804:BUSG534-MONOMER - GO: GO:0005622 - InterPro: IPR011257 - InterPro: IPR004036 - InterPro: IPR004035 - InterPro: IPR003651 - InterPro: IPR003265 - InterPro: IPR000445 - InterPro: IPR003583 - InterPro: IPR023170 - InterPro: IPR005760 - InterPro: IPR000086 - InterPro: IPR015797 - Gene3D: G3DSA:1.10.340.30 - Gene3D: G3DSA:1.10.1670.10 - Gene3D: G3DSA:3.90.79.10 - SMART: SM00478 - SMART: SM00525 - SMART: SM00278 - TIGRFAMs: TIGR01084
Pfam domain/function: PF00633 HHH; PF00730 HhH-GPD; SSF48150 DNA_glycsylse; SSF55811 NUDIX_hydrolase
EC number: 3.2.2.-
Molecular weight: Translated: 41302; Mature: 41170
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: PS00764 ENDONUCLEASE_III_1; PS01155 ENDONUCLEASE_III_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIYVFSQLILNWYHINGRKNLPWKKDKTLYKVWISEIMLQQTTVKTAIPYFKNFISRFP CEEHEEHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NIQSLNQSKLDDILCLWSGLGYYKRAENIYKTVKIIKEEFQEKFPTGFSDLIKLPGIGRS CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC TAGAILSLSLDYFFPILEGNVKRILMRYYGIIGYVTEKKIEQKLWYLIELITPIHNTGSF HHHHHHEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC NQGIMDIGALICTPKNPKCNLCPLIQKCIAYKEKNWIKYPLKKKKKIILEKKSWFVVIKY CCCHHHHHHEEECCCCCCCCHHHHHHHHHHHHCCCCEECCHHHHHHHEEECCCEEEEEEE QNQFWIEKNTEKKIWKNLFCFPNFDTKIKTIEWLKKNKINIDKKHKKIQSFYHKFSHFTL CCEEEEECCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH HIIPILVNLSFFKNFQNSKKTGIWYDLKNTHDIGLPKPVQKILEIFK HHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHC >Mature Secondary Structure TIYVFSQLILNWYHINGRKNLPWKKDKTLYKVWISEIMLQQTTVKTAIPYFKNFISRFP EEHEEHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NIQSLNQSKLDDILCLWSGLGYYKRAENIYKTVKIIKEEFQEKFPTGFSDLIKLPGIGRS CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC TAGAILSLSLDYFFPILEGNVKRILMRYYGIIGYVTEKKIEQKLWYLIELITPIHNTGSF HHHHHHEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC NQGIMDIGALICTPKNPKCNLCPLIQKCIAYKEKNWIKYPLKKKKKIILEKKSWFVVIKY CCCHHHHHHEEECCCCCCCCHHHHHHHHHHHHCCCCEECCHHHHHHHEEECCCEEEEEEE QNQFWIEKNTEKKIWKNLFCFPNFDTKIKTIEWLKKNKINIDKKHKKIQSFYHKFSHFTL CCEEEEECCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH HIIPILVNLSFFKNFQNSKKTGIWYDLKNTHDIGLPKPVQKILEIFK HHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: 4Fe-4S Cluster [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Glycosylases; Hydrolysing N-glycosyl compounds [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12089438