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The map label for this gene is secY

Identifier: 21672750

GI number: 21672750

Start: 550561

End: 551880

Strand: Reverse

Name: secY

Synonym: BUsg485

Alternate gene names: 21672750

Gene position: 551880-550561 (Counterclockwise)

Preceding gene: 21672751

Following gene: 21672749

Centisome position: 86.04

GC content: 26.67

Gene sequence:

>1320_bases
ATGATCAAAAAATTAGGATTAAATTTCAAAAATACTAAGAAAGTCACAAATGAACTTAAGCAAAGAATTGCTTCTGTAGT
TATTGCATTAATCATTTTTCGAATTGGTTCTTTTATTCCTATTCCTGGAATTGATACTACGATTTTATCTAGAATATTAA
ATGATCAGAAAGGCACTATTATTGAAATGTTCAATATGTTTTCTGGTGGTGCTTTAAGTCGTGCTTCTATCTTTGCATTA
GGAATTATGCCTTATATATCATCTTCTATTATTATTCAATTATTAACACTAGTAATTCCTTCTTTGTCTGAAATAAAAAA
AGAAGGTGAAGTTGGACGCACTAAAATCAATCAATACACAAGGTATACTACCTTAGTATTAGCATTATTTCAATCAATTG
GTATTGTTACGAGTCTACCTAAAATATCTGGTATGAATCAAATTATAATTCATCCTGATTTTTATTTTTATTTTACTGCT
ATTATTATTTTAGTTACTGGTACAATGTTTTTGATGTGGTTAGGAGAATTAATTACAGAATGCGGTATTGGCAATGGAAT
TTCTATTATAATTTTTATAGGTATAATAGCCGGTTTACCATCAGCTATTGTTCATACAATTGAACAAACTAGACAAGGTG
ATTTACATATATTATTATTTCTTTGTGTTTTAATATTAATTTTTTCCGTTGTTTTTTTAGTCGTATTTATTGAGCGTAGT
CAAAGAAAAATTATTATTCATTATGCTCAACGTCAAAAAGGTCGTCGTATTTATTCTACTCAAAGCACTCATTTACCTTT
AAAAATAAATATGGCCGGTGTGATACCAGCTATTTTTGCTTCCAGTGTTGTTTTATTTCCTGTAACAATTATATCTTGGT
TTGGAATAGATCGAAAGTGCTATCTATTAAAAACTATTTTTTTTTATTTTCAACCTAATCAACCTTTATATTTAATATTA
TATGTTTTTTCTATAATATTTTTTTGTTTTTTTTATACTGGATTAGTTTTTAATCCTCGTGAAACTGCAGATAATTTAAA
GAAATCAGGTGGTTTTATTTCAGGAATTAGACCAGGTGAACAAACAGCTAAATATATCAATAAGATTATGATTCGATTAA
CACTTTTTGGTTCTTTATATATTGCGTTTATTTGTTTGATACCTGAATTTATGAGAAGTGCTATGAATGTTCCTTTTTAT
TTTGGTGGAACATCATTATTGATTGTTGTTGTTGTAATTATGGATTTTATAGCCCAAATTCAAACTTTAATTATGTCTAG
TCAGTATGAATCTGTATTAAAAAAAGCTAATTTAAATTAA

Upstream 100 bases:

>100_bases
TTAGAAGTGGCTTTGACATTACATGGGTTACGTGTAACTCGAGGTGCTCGTCTCGCAATTGAAAATTATGGCGGTAAAAT
TGAAGGATAAGCGGTAAATA

Downstream 100 bases:

>100_bases
ATTATTTCTTAATACGAATACAAGGAAAATAGAGTGAAAGTGAAAGCTTCTGTAAAAGTTCTTTGTCGAAACTGTAAAAT
AGTTCGAAGAAAGAATGTTG

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MIKKLGLNFKNTKKVTNELKQRIASVVIALIIFRIGSFIPIPGIDTTILSRILNDQKGTIIEMFNMFSGGALSRASIFAL
GIMPYISSSIIIQLLTLVIPSLSEIKKEGEVGRTKINQYTRYTTLVLALFQSIGIVTSLPKISGMNQIIIHPDFYFYFTA
IIILVTGTMFLMWLGELITECGIGNGISIIIFIGIIAGLPSAIVHTIEQTRQGDLHILLFLCVLILIFSVVFLVVFIERS
QRKIIIHYAQRQKGRRIYSTQSTHLPLKINMAGVIPAIFASSVVLFPVTIISWFGIDRKCYLLKTIFFYFQPNQPLYLIL
YVFSIIFFCFFYTGLVFNPRETADNLKKSGGFISGIRPGEQTAKYINKIMIRLTLFGSLYIAFICLIPEFMRSAMNVPFY
FGGTSLLIVVVVIMDFIAQIQTLIMSSQYESVLKKANLN

Sequences:

>Translated_439_residues
MIKKLGLNFKNTKKVTNELKQRIASVVIALIIFRIGSFIPIPGIDTTILSRILNDQKGTIIEMFNMFSGGALSRASIFAL
GIMPYISSSIIIQLLTLVIPSLSEIKKEGEVGRTKINQYTRYTTLVLALFQSIGIVTSLPKISGMNQIIIHPDFYFYFTA
IIILVTGTMFLMWLGELITECGIGNGISIIIFIGIIAGLPSAIVHTIEQTRQGDLHILLFLCVLILIFSVVFLVVFIERS
QRKIIIHYAQRQKGRRIYSTQSTHLPLKINMAGVIPAIFASSVVLFPVTIISWFGIDRKCYLLKTIFFYFQPNQPLYLIL
YVFSIIFFCFFYTGLVFNPRETADNLKKSGGFISGIRPGEQTAKYINKIMIRLTLFGSLYIAFICLIPEFMRSAMNVPFY
FGGTSLLIVVVVIMDFIAQIQTLIMSSQYESVLKKANLN
>Mature_439_residues
MIKKLGLNFKNTKKVTNELKQRIASVVIALIIFRIGSFIPIPGIDTTILSRILNDQKGTIIEMFNMFSGGALSRASIFAL
GIMPYISSSIIIQLLTLVIPSLSEIKKEGEVGRTKINQYTRYTTLVLALFQSIGIVTSLPKISGMNQIIIHPDFYFYFTA
IIILVTGTMFLMWLGELITECGIGNGISIIIFIGIIAGLPSAIVHTIEQTRQGDLHILLFLCVLILIFSVVFLVVFIERS
QRKIIIHYAQRQKGRRIYSTQSTHLPLKINMAGVIPAIFASSVVLFPVTIISWFGIDRKCYLLKTIFFYFQPNQPLYLIL
YVFSIIFFCFFYTGLVFNPRETADNLKKSGGFISGIRPGEQTAKYINKIMIRLTLFGSLYIAFICLIPEFMRSAMNVPFY
FGGTSLLIVVVVIMDFIAQIQTLIMSSQYESVLKKANLN

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family

Homologues:

Organism=Escherichia coli, GI1789696, Length=439, Percent_Identity=72.8929384965831, Blast_Score=620, Evalue=1e-179,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SECY_BUCAP (Q8K969)

Other databases:

- EMBL:   AE013218
- RefSeq:   NP_660817.1
- ProteinModelPortal:   Q8K969
- EnsemblBacteria:   EBBUCT00000000307
- GeneID:   1005684
- GenomeReviews:   AE013218_GR
- KEGG:   bas:BUsg485
- GeneTree:   EBGT00050000008156
- HOGENOM:   HBG565931
- OMA:   IQTYVIS
- ProtClustDB:   PRK09204
- BioCyc:   BAPH198804:BUSG485-MONOMER
- InterPro:   IPR002208
- InterPro:   IPR023201
- PANTHER:   PTHR10906
- PIRSF:   PIRSF004557
- PRINTS:   PR00303
- TIGRFAMs:   TIGR00967

Pfam domain/function: PF00344 SecY; SSF103491 SecY

EC number: NA

Molecular weight: Translated: 49440; Mature: 49440

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: PS00755 SECY_1; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc83e56c)-; HASH(0xcbbb47c)-; HASH(0xbf181f4)-; HASH(0xc4d81b8)-; HASH(0xae5619c)-; HASH(0xcc9c0e4)-; HASH(0xbfb5bf8)-; HASH(0xbf69574)-; HASH(0xc82cc98)-; HASH(0xca69b5c)-;

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKLGLNFKNTKKVTNELKQRIASVVIALIIFRIGSFIPIPGIDTTILSRILNDQKGTI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHH
IEMFNMFSGGALSRASIFALGIMPYISSSIIIQLLTLVIPSLSEIKKEGEVGRTKINQYT
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHH
RYTTLVLALFQSIGIVTSLPKISGMNQIIIHPDFYFYFTAIIILVTGTMFLMWLGELITE
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
CGIGNGISIIIFIGIIAGLPSAIVHTIEQTRQGDLHILLFLCVLILIFSVVFLVVFIERS
CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
QRKIIIHYAQRQKGRRIYSTQSTHLPLKINMAGVIPAIFASSVVLFPVTIISWFGIDRKC
CCEEEEEEHHHHCCCEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
YLLKTIFFYFQPNQPLYLILYVFSIIFFCFFYTGLVFNPRETADNLKKSGGFISGIRPGE
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEECCCCCCH
QTAKYINKIMIRLTLFGSLYIAFICLIPEFMRSAMNVPFYFGGTSLLIVVVVIMDFIAQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHH
QTLIMSSQYESVLKKANLN
HHHHHHHHHHHHHHHCCCH
>Mature Secondary Structure
MIKKLGLNFKNTKKVTNELKQRIASVVIALIIFRIGSFIPIPGIDTTILSRILNDQKGTI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHH
IEMFNMFSGGALSRASIFALGIMPYISSSIIIQLLTLVIPSLSEIKKEGEVGRTKINQYT
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHH
RYTTLVLALFQSIGIVTSLPKISGMNQIIIHPDFYFYFTAIIILVTGTMFLMWLGELITE
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
CGIGNGISIIIFIGIIAGLPSAIVHTIEQTRQGDLHILLFLCVLILIFSVVFLVVFIERS
CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
QRKIIIHYAQRQKGRRIYSTQSTHLPLKINMAGVIPAIFASSVVLFPVTIISWFGIDRKC
CCEEEEEEHHHHCCCEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
YLLKTIFFYFQPNQPLYLILYVFSIIFFCFFYTGLVFNPRETADNLKKSGGFISGIRPGE
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEECCCCCCH
QTAKYINKIMIRLTLFGSLYIAFICLIPEFMRSAMNVPFYFGGTSLLIVVVVIMDFIAQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHH
QTLIMSSQYESVLKKANLN
HHHHHHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12089438