| Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
|---|---|
| Accession | NC_004061 |
| Length | 641,454 |
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The map label for this gene is lon
Identifier: 21672726
GI number: 21672726
Start: 523305
End: 525638
Strand: Direct
Name: lon
Synonym: BUsg461
Alternate gene names: 21672726
Gene position: 523305-525638 (Clockwise)
Preceding gene: 21672725
Following gene: 21672727
Centisome position: 81.58
GC content: 29.69
Gene sequence:
>2334_bases ATGAATTCTGAGCGTTCTGAACGCATTAAAATTCCCGTTTTACCGTTAAGAGATGTAGTTGTGTATCCTCACATGGTTAT TCCATTATTTGTAGGTCGTAAAAAATCAATTCATTGCATTGAAACATCTATGAATAACGATAAAAAAATCATGCTAATTG CACAAAAAGAAGCATCAAAAGACGAACCTAGTACAAATGATTTATTTAATATAGGAACTATTAGCTCAATTTTACAAATG TTAAAACTACCAGATGGAACAGTAAAAGTACTAGTAGAGGGCTTACAACGTGCTTGTATTAAAAATATAGAAAGCAATGG AGAACATTTAGTTGCTGAGGTAGAATTAATTATTTCTCCTACTGTTATAGATAAAGAACAAGAAGTATTAATTCGAACAA CAGTTAATCAATTTGAGTCTTATATCAAACTTAATAAAAAAATTCCTTCAGAAATACTTAATACTCTTAGCCAAACGAAA AATGCAGAAAAACTAGCAGATACAATTGCTGCTCATATGCCATTAAAATTAGCTGATAAACAGTCAGTATTGGAAATATA TAATGTAAATGAAAGATTAGAATTTTTAATGGCTATAATGGAAACAGAAATAGATTTATTAAAAGTGGAAAAAAGAATTA GAAATCGTGTTAAAAAACAAATGGAAAAGAGTCAAAGAGAATATTATCTCAATGAACAAATAAAAGCTATTCAAAAAGAA CTTGGAGATATGGACGAAATTCCAGATGAAAATAAAATTTTAAAACGTAAGATTAAAAGTTTAAAAATGCCTAAAGAAGC AAAAGAAAAAACAGAATCAGAATTACAAAAGTTAAAAATGATGTCACCAATGTCAGCAGAAGCGACAGTAGTACGAAGTT ATATTGATTGGATGATACAGGTTCCTTGGAATATAAAAACAAAAATAAAAAAAGATATTCAAGAAGCAAAAAAAATTCTT GATATAGACCATTTTGGTCTAGAAAAGGTAAAAGAACGCATATTAGAATATTTAGCTGTACAAAGTAGGACAAATAAAGT TAAAGGTCCTATTTTGTGTTTAATAGGTCCTCCTGGGGTAGGTAAAACATCTTTAGGAAAATCTATTGCAAAATCAACAG GTAGAAAATATGTAAGAATGGCTTTAGGTGGAATACGAGACGAAGCTGAAATTAGAGGTCATCGACGTACATATATTGGT TCAATGCCTGGAAAATTAATGCAAAAAATGGTAAAAGCAAAGGTAAAAAATCCTTTATTTTTACTTGACGAAATTGATAA AATGTCTTGTGATATAAGAGTTGATCCAGCATCTGCATTACTAGAAGTACTAGATCCTGAACAAAATATAAATTTTAATG ATCATTATTTAGAAGTAGACTATGATCTTTCAGATGTTATGTTTGTAGCAACTTCTAACTCTATGAATATACCTGCACCA TTACTTGATCGAATGGAAATAATCCGTCTTTCTGGTTATACAGAAAACGAAAAATTAAATATAGCGAAGTGCTATTTATA TCCAAAACAAATGGAAAGAAATGCATTAAAAAGGAACGAACTCATCATTACTGATTGCGCTATAATTAGTATAATTCAAT ATTATACTCGTGAAGCAGGAGTACGTAGTTTAGAACGTGAAATATCTAAAATATGTAGAAAAGTCGTAAAACTTTTAATT TTAAATAAATCTTTAAAAAAAATAGAAATAAACAGTAAAAATTTAAAGAAATTTTTAGGAATAAAACGATTTGATTACGG AAAAACAAACAATTTAAATCAAATCGGACAGGTTGTTGGATTGGCTTGGACAGAAGTAGGTGGAGAATTATTGACAATTG AGACAGCATGTGTTTCAGGAAAAGGAAAACTTACTTACACAGGTTCTTTAGGTGAAGTTATGCAAGAATCAATTCAAGCT GCATTAACTGTAGTTCGATCTCAAGCAAAAAAATTAGGAATTAAAAAAGATTTTCATGAAAAACATGATATTCATGTTCA TGTTCCCGAAGGTGCTACACCGAAAGACGGTCCGAGTGCAGGTATCGCGATGTGTACAGCTATAGTATCTTCTTTAACAA AGAATCCTGTCAAATCTAATATTGCGATGACAGGAGAAATTACATTACAAGGAAGGGTATTAACAATAGGAGGACTAAAA GAAAAATTACTTGCAGCACATCGTGGAGGTGTTAAAACTGTGTTAATACCATATGAAAATAAACGTAATTTAGAAGAAAT ACCAAAAAATATTATTGAAGGACTAACAATTTATCCAGTAAAGAATATCGAAGAAGTTTTAAAAATAGCATTAGAAAATA CACCTTACGTATAA
Upstream 100 bases:
>100_bases TATACTTGGCTTAAGTATAAATAGAGCTGCATATTATTTTATAATAAATTGCAGTTTTTAATAAATATAAACAGCGGAAA TTCAACTAAGAGAGAGCTCT
Downstream 100 bases:
>100_bases AAGATCTAAATTTGGCTGACAAAAAACCGTCAGCCTTTATAATTTAAATAAAAAAATTAAAAATTTCAATATAAAATTGA AACTATCTAGGATAGTTATA
Product: ATP-dependent protease LA
Products: NA
Alternate protein names: ATP-dependent protease La
Number of amino acids: Translated: 777; Mature: 777
Protein sequence:
>777_residues MNSERSERIKIPVLPLRDVVVYPHMVIPLFVGRKKSIHCIETSMNNDKKIMLIAQKEASKDEPSTNDLFNIGTISSILQM LKLPDGTVKVLVEGLQRACIKNIESNGEHLVAEVELIISPTVIDKEQEVLIRTTVNQFESYIKLNKKIPSEILNTLSQTK NAEKLADTIAAHMPLKLADKQSVLEIYNVNERLEFLMAIMETEIDLLKVEKRIRNRVKKQMEKSQREYYLNEQIKAIQKE LGDMDEIPDENKILKRKIKSLKMPKEAKEKTESELQKLKMMSPMSAEATVVRSYIDWMIQVPWNIKTKIKKDIQEAKKIL DIDHFGLEKVKERILEYLAVQSRTNKVKGPILCLIGPPGVGKTSLGKSIAKSTGRKYVRMALGGIRDEAEIRGHRRTYIG SMPGKLMQKMVKAKVKNPLFLLDEIDKMSCDIRVDPASALLEVLDPEQNINFNDHYLEVDYDLSDVMFVATSNSMNIPAP LLDRMEIIRLSGYTENEKLNIAKCYLYPKQMERNALKRNELIITDCAIISIIQYYTREAGVRSLEREISKICRKVVKLLI LNKSLKKIEINSKNLKKFLGIKRFDYGKTNNLNQIGQVVGLAWTEVGGELLTIETACVSGKGKLTYTGSLGEVMQESIQA ALTVVRSQAKKLGIKKDFHEKHDIHVHVPEGATPKDGPSAGIAMCTAIVSSLTKNPVKSNIAMTGEITLQGRVLTIGGLK EKLLAAHRGGVKTVLIPYENKRNLEEIPKNIIEGLTIYPVKNIEEVLKIALENTPYV
Sequences:
>Translated_777_residues MNSERSERIKIPVLPLRDVVVYPHMVIPLFVGRKKSIHCIETSMNNDKKIMLIAQKEASKDEPSTNDLFNIGTISSILQM LKLPDGTVKVLVEGLQRACIKNIESNGEHLVAEVELIISPTVIDKEQEVLIRTTVNQFESYIKLNKKIPSEILNTLSQTK NAEKLADTIAAHMPLKLADKQSVLEIYNVNERLEFLMAIMETEIDLLKVEKRIRNRVKKQMEKSQREYYLNEQIKAIQKE LGDMDEIPDENKILKRKIKSLKMPKEAKEKTESELQKLKMMSPMSAEATVVRSYIDWMIQVPWNIKTKIKKDIQEAKKIL DIDHFGLEKVKERILEYLAVQSRTNKVKGPILCLIGPPGVGKTSLGKSIAKSTGRKYVRMALGGIRDEAEIRGHRRTYIG SMPGKLMQKMVKAKVKNPLFLLDEIDKMSCDIRVDPASALLEVLDPEQNINFNDHYLEVDYDLSDVMFVATSNSMNIPAP LLDRMEIIRLSGYTENEKLNIAKCYLYPKQMERNALKRNELIITDCAIISIIQYYTREAGVRSLEREISKICRKVVKLLI LNKSLKKIEINSKNLKKFLGIKRFDYGKTNNLNQIGQVVGLAWTEVGGELLTIETACVSGKGKLTYTGSLGEVMQESIQA ALTVVRSQAKKLGIKKDFHEKHDIHVHVPEGATPKDGPSAGIAMCTAIVSSLTKNPVKSNIAMTGEITLQGRVLTIGGLK EKLLAAHRGGVKTVLIPYENKRNLEEIPKNIIEGLTIYPVKNIEEVLKIALENTPYV >Mature_777_residues MNSERSERIKIPVLPLRDVVVYPHMVIPLFVGRKKSIHCIETSMNNDKKIMLIAQKEASKDEPSTNDLFNIGTISSILQM LKLPDGTVKVLVEGLQRACIKNIESNGEHLVAEVELIISPTVIDKEQEVLIRTTVNQFESYIKLNKKIPSEILNTLSQTK NAEKLADTIAAHMPLKLADKQSVLEIYNVNERLEFLMAIMETEIDLLKVEKRIRNRVKKQMEKSQREYYLNEQIKAIQKE LGDMDEIPDENKILKRKIKSLKMPKEAKEKTESELQKLKMMSPMSAEATVVRSYIDWMIQVPWNIKTKIKKDIQEAKKIL DIDHFGLEKVKERILEYLAVQSRTNKVKGPILCLIGPPGVGKTSLGKSIAKSTGRKYVRMALGGIRDEAEIRGHRRTYIG SMPGKLMQKMVKAKVKNPLFLLDEIDKMSCDIRVDPASALLEVLDPEQNINFNDHYLEVDYDLSDVMFVATSNSMNIPAP LLDRMEIIRLSGYTENEKLNIAKCYLYPKQMERNALKRNELIITDCAIISIIQYYTREAGVRSLEREISKICRKVVKLLI LNKSLKKIEINSKNLKKFLGIKRFDYGKTNNLNQIGQVVGLAWTEVGGELLTIETACVSGKGKLTYTGSLGEVMQESIQA ALTVVRSQAKKLGIKKDFHEKHDIHVHVPEGATPKDGPSAGIAMCTAIVSSLTKNPVKSNIAMTGEITLQGRVLTIGGLK EKLLAAHRGGVKTVLIPYENKRNLEEIPKNIIEGLTIYPVKNIEEVLKIALENTPYV
Specific function: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced
COG id: COG0466
COG function: function code O; ATP-dependent Lon protease, bacterial type
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Lon domain
Homologues:
Organism=Homo sapiens, GI31377667, Length=778, Percent_Identity=38.1748071979434, Blast_Score=504, Evalue=1e-142, Organism=Homo sapiens, GI21396489, Length=689, Percent_Identity=39.0420899854862, Blast_Score=499, Evalue=1e-141, Organism=Escherichia coli, GI1786643, Length=775, Percent_Identity=78.3225806451613, Blast_Score=1271, Evalue=0.0, Organism=Caenorhabditis elegans, GI17505831, Length=632, Percent_Identity=40.1898734177215, Blast_Score=475, Evalue=1e-134, Organism=Caenorhabditis elegans, GI17556486, Length=804, Percent_Identity=33.7064676616915, Blast_Score=417, Evalue=1e-116, Organism=Saccharomyces cerevisiae, GI6319449, Length=652, Percent_Identity=40.4907975460123, Blast_Score=475, Evalue=1e-135, Organism=Drosophila melanogaster, GI24666867, Length=685, Percent_Identity=41.021897810219, Blast_Score=510, Evalue=1e-144, Organism=Drosophila melanogaster, GI221513036, Length=685, Percent_Identity=41.021897810219, Blast_Score=509, Evalue=1e-144,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): LON_BUCAP (Q8K988)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660793.1 - ProteinModelPortal: Q8K988 - MEROPS: S16.001 - EnsemblBacteria: EBBUCT00000000422 - GeneID: 1005704 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg461 - GeneTree: EBGT00050000007957 - HOGENOM: HBG566281 - OMA: IQKMSKV - ProtClustDB: CLSK316282 - BioCyc: BAPH198804:BUSG461-MONOMER - GO: GO:0005737 - GO: GO:0006508 - InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR008269 - InterPro: IPR004815 - InterPro: IPR003111 - InterPro: IPR008268 - InterPro: IPR001984 - InterPro: IPR015947 - InterPro: IPR020568 - PRINTS: PR00830 - SMART: SM00382 - SMART: SM00464 - TIGRFAMs: TIGR00763
Pfam domain/function: PF00004 AAA; PF02190 LON; PF05362 Lon_C; SSF88697 PUA-like; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: =3.4.21.53
Molecular weight: Translated: 87756; Mature: 87756
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: PS01046 LON_SER
Important sites: ACT_SITE 679-679 ACT_SITE 722-722
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSERSERIKIPVLPLRDVVVYPHMVIPLFVGRKKSIHCIETSMNNDKKIMLIAQKEASK CCCCCCCEEEECCCCHHHHHHCCHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEECCCCC DEPSTNDLFNIGTISSILQMLKLPDGTVKVLVEGLQRACIKNIESNGEHLVAEVELIISP CCCCCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECC TVIDKEQEVLIRTTVNQFESYIKLNKKIPSEILNTLSQTKNAEKLADTIAAHMPLKLADK CEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCCCEECCH QSVLEIYNVNERLEFLMAIMETEIDLLKVEKRIRNRVKKQMEKSQREYYLNEQIKAIQKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGDMDEIPDENKILKRKIKSLKMPKEAKEKTESELQKLKMMSPMSAEATVVRSYIDWMIQ HCCHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEE VPWNIKTKIKKDIQEAKKILDIDHFGLEKVKERILEYLAVQSRTNKVKGPILCLIGPPGV CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC GKTSLGKSIAKSTGRKYVRMALGGIRDEAEIRGHRRTYIGSMPGKLMQKMVKAKVKNPLF CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHCCCCCHHHHHHHHHHHHCCCEE LLDEIDKMSCDIRVDPASALLEVLDPEQNINFNDHYLEVDYDLSDVMFVATSNSMNIPAP EEECCCCCCCCEEECHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCHH LLDRMEIIRLSGYTENEKLNIAKCYLYPKQMERNALKRNELIITDCAIISIIQYYTREAG HHHHHHHHHCCCCCCCCCEEEEEEEECHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHH VRSLEREISKICRKVVKLLILNKSLKKIEINSKNLKKFLGIKRFDYGKTNNLNQIGQVVG HHHHHHHHHHHHHHHHHHHHHCCCHHEEECCHHHHHHHHCCCCCCCCCCCCHHHHHHHHH LAWTEVGGELLTIETACVSGKGKLTYTGSLGEVMQESIQAALTVVRSQAKKLGIKKDFHE HHHHHCCCEEEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCC KHDIHVHVPEGATPKDGPSAGIAMCTAIVSSLTKNPVKSNIAMTGEITLQGRVLTIGGLK CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEEECCHH EKLLAAHRGGVKTVLIPYENKRNLEEIPKNIIEGLTIYPVKNIEEVLKIALENTPYV HHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCEEEEEHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNSERSERIKIPVLPLRDVVVYPHMVIPLFVGRKKSIHCIETSMNNDKKIMLIAQKEASK CCCCCCCEEEECCCCHHHHHHCCHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEECCCCC DEPSTNDLFNIGTISSILQMLKLPDGTVKVLVEGLQRACIKNIESNGEHLVAEVELIISP CCCCCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECC TVIDKEQEVLIRTTVNQFESYIKLNKKIPSEILNTLSQTKNAEKLADTIAAHMPLKLADK CEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCCCEECCH QSVLEIYNVNERLEFLMAIMETEIDLLKVEKRIRNRVKKQMEKSQREYYLNEQIKAIQKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGDMDEIPDENKILKRKIKSLKMPKEAKEKTESELQKLKMMSPMSAEATVVRSYIDWMIQ HCCHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEE VPWNIKTKIKKDIQEAKKILDIDHFGLEKVKERILEYLAVQSRTNKVKGPILCLIGPPGV CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC GKTSLGKSIAKSTGRKYVRMALGGIRDEAEIRGHRRTYIGSMPGKLMQKMVKAKVKNPLF CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHCCCCCHHHHHHHHHHHHCCCEE LLDEIDKMSCDIRVDPASALLEVLDPEQNINFNDHYLEVDYDLSDVMFVATSNSMNIPAP EEECCCCCCCCEEECHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCHH LLDRMEIIRLSGYTENEKLNIAKCYLYPKQMERNALKRNELIITDCAIISIIQYYTREAG HHHHHHHHHCCCCCCCCCEEEEEEEECHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHH VRSLEREISKICRKVVKLLILNKSLKKIEINSKNLKKFLGIKRFDYGKTNNLNQIGQVVG HHHHHHHHHHHHHHHHHHHHHCCCHHEEECCHHHHHHHHCCCCCCCCCCCCHHHHHHHHH LAWTEVGGELLTIETACVSGKGKLTYTGSLGEVMQESIQAALTVVRSQAKKLGIKKDFHE HHHHHCCCEEEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCC KHDIHVHVPEGATPKDGPSAGIAMCTAIVSSLTKNPVKSNIAMTGEITLQGRVLTIGGLK CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEEECCHH EKLLAAHRGGVKTVLIPYENKRNLEEIPKNIIEGLTIYPVKNIEEVLKIALENTPYV HHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCEEEEEHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12089438