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The map label for this gene is yfiO [C]

Identifier: 21672663

GI number: 21672663

Start: 439399

End: 440130

Strand: Direct

Name: yfiO [C]

Synonym: BUsg389

Alternate gene names: 21672663

Gene position: 439399-440130 (Clockwise)

Preceding gene: 21672660

Following gene: 21672664

Centisome position: 68.5

GC content: 17.9

Gene sequence:

>732_bases
ATGAAAAAAAAAAATACTGTATTTATTTTTATGATATTATTTTTAAGTTTTGCAATATATTCTAAAAATTTAAAAAATTA
TAATCTTATATTAAATAATTATTTGTATCAAAAATGCAGAAAAGAATTAAAAGAGAAAAATTTTTATAAAGCAATATTTG
ATCTAAAAAAAATTGAAAATAATCATGCTATTAATTTTAATAACGATAAAATTAAAATGAATTTGATTTATGCTTATTAT
AAAGTTTCAGACTTCAATACAGCTGAAAAAAATATAGAAGAATTTATTAAAAAATATCCGAAACATTTAAATATAGACTA
TATCTTTTATATACAGAGTTTAATTAATATATCTTTAGATAAAAAAATATTTCACAACGTTTTTCCTATCCAAATTTATA
AAAGCAATCCTATTTACGCAATTAAAGCATTTTTTCAACTTAAAAAGTTCGTTTATAATTATCCTAATAGTATATATGTT
ATAAATGCAAAAAAAGATTTATTTTATTTAAAAAAACGTTTATCAGAACACGATTTAACAATATTAAAATATTATTTTTA
TCACAAAAAATATATAGCAGTTATTAATCGCGGAGAAGAAATACTTCAAAAATATCCAGAAACATCAGCTGCAATAGATA
CACTTAAATATATGGAAAAATCTTTTCTTGCATTAAAAATTTTTGATACAGCCAAAAAAATATCTAAAATTATTTTATTA
AATAAAGTGTAA

Upstream 100 bases:

>100_bases
TATGATATTCTATAATCTTACTGAAATTAGTAGTAATTTATGTAGTATTAAATATAAATATGATTCAAAAAAATTTTTAT
TAATTTAAAGAAAAACACTA

Downstream 100 bases:

>100_bases
ATTTTTTTATAAATAAATTAATTTTTATTTTTAATATTTAAGTAAAAAAAATGAAAAAAACAACAAATGAAATAAGACAA
AGTTTCTTAAATTTTTTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MKKKNTVFIFMILFLSFAIYSKNLKNYNLILNNYLYQKCRKELKEKNFYKAIFDLKKIENNHAINFNNDKIKMNLIYAYY
KVSDFNTAEKNIEEFIKKYPKHLNIDYIFYIQSLINISLDKKIFHNVFPIQIYKSNPIYAIKAFFQLKKFVYNYPNSIYV
INAKKDLFYLKKRLSEHDLTILKYYFYHKKYIAVINRGEEILQKYPETSAAIDTLKYMEKSFLALKIFDTAKKISKIILL
NKV

Sequences:

>Translated_243_residues
MKKKNTVFIFMILFLSFAIYSKNLKNYNLILNNYLYQKCRKELKEKNFYKAIFDLKKIENNHAINFNNDKIKMNLIYAYY
KVSDFNTAEKNIEEFIKKYPKHLNIDYIFYIQSLINISLDKKIFHNVFPIQIYKSNPIYAIKAFFQLKKFVYNYPNSIYV
INAKKDLFYLKKRLSEHDLTILKYYFYHKKYIAVINRGEEILQKYPETSAAIDTLKYMEKSFLALKIFDTAKKISKIILL
NKV
>Mature_243_residues
MKKKNTVFIFMILFLSFAIYSKNLKNYNLILNNYLYQKCRKELKEKNFYKAIFDLKKIENNHAINFNNDKIKMNLIYAYY
KVSDFNTAEKNIEEFIKKYPKHLNIDYIFYIQSLINISLDKKIFHNVFPIQIYKSNPIYAIKAFFQLKKFVYNYPNSIYV
INAKKDLFYLKKRLSEHDLTILKYYFYHKKYIAVINRGEEILQKYPETSAAIDTLKYMEKSFLALKIFDTAKKISKIILL
NKV

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0169 (ComL) family

Homologues:

Organism=Escherichia coli, GI1788947, Length=210, Percent_Identity=34.2857142857143, Blast_Score=155, Evalue=2e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y389_BUCAP (Q8K9E8)

Other databases:

- EMBL:   AE013218
- RefSeq:   NP_660730.1
- EnsemblBacteria:   EBBUCT00000000454
- GeneID:   1005768
- GenomeReviews:   AE013218_GR
- KEGG:   bas:BUsg389
- GeneTree:   EBGT00050000007827
- HOGENOM:   HBG038986
- OMA:   QIYLDLI
- ProtClustDB:   CLSK316116
- BioCyc:   BAPH198804:BUSG389-MONOMER
- GO:   GO:0005488
- InterPro:   IPR017689
- InterPro:   IPR011990
- Gene3D:   G3DSA:1.25.40.10
- TIGRFAMs:   TIGR03302

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29374; Mature: 29374

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKNTVFIFMILFLSFAIYSKNLKNYNLILNNYLYQKCRKELKEKNFYKAIFDLKKIEN
CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NHAINFNNDKIKMNLIYAYYKVSDFNTAEKNIEEFIKKYPKHLNIDYIFYIQSLINISLD
CCEEEECCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHCCCC
KKIFHNVFPIQIYKSNPIYAIKAFFQLKKFVYNYPNSIYVINAKKDLFYLKKRLSEHDLT
HHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCHH
ILKYYFYHKKYIAVINRGEEILQKYPETSAAIDTLKYMEKSFLALKIFDTAKKISKIILL
HHHHHHHHHHHHEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHEE
NKV
ECC
>Mature Secondary Structure
MKKKNTVFIFMILFLSFAIYSKNLKNYNLILNNYLYQKCRKELKEKNFYKAIFDLKKIEN
CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NHAINFNNDKIKMNLIYAYYKVSDFNTAEKNIEEFIKKYPKHLNIDYIFYIQSLINISLD
CCEEEECCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHCCCC
KKIFHNVFPIQIYKSNPIYAIKAFFQLKKFVYNYPNSIYVINAKKDLFYLKKRLSEHDLT
HHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCHH
ILKYYFYHKKYIAVINRGEEILQKYPETSAAIDTLKYMEKSFLALKIFDTAKKISKIILL
HHHHHHHHHHHHEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHEE
NKV
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12089438