| Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
|---|---|
| Accession | NC_004061 |
| Length | 641,454 |
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The map label for this gene is pykA
Identifier: 21672587
GI number: 21672587
Start: 355536
End: 356981
Strand: Reverse
Name: pykA
Synonym: BUsg311
Alternate gene names: 21672587
Gene position: 356981-355536 (Counterclockwise)
Preceding gene: 21672592
Following gene: 21672584
Centisome position: 55.65
GC content: 29.94
Gene sequence:
>1446_bases ATGTTAAATCGTGTTAGAAGAACAAAAATTGTAGCAACTTTAGGACCTTCTACAGATAAAGCAAATAATCTTGAAAAGAT TATTTTATCTGGAGCAAATGTTCTTCGTTTAAATTTTTCTCATGGTTCATCTGAAGAACATAAAAAAAGAGCGAAAAAAG CAAAAGAAATAATGTTTAAATTAAATTGTCATATTGCTTTATTAGGTGATTTACAAGGACCAAAAATCAGAATTTCTAAA TTTAAAAAAAACAGTATTTTTTTAAAAGTTAATGACGTTTTTATATTAGATGCAAATTTAAATGAAAAAAATGGAAACAA TGAAAGAGTCGGAATTGATTATAAAAAATTACCAAATGACCTAAATGTAAATGATATCTTGTTGTTAGACGACGGAAGAA TACAATTAAAAGTAATAAAAATTGAAAAATGTGCAATATTTACAAAAGTTATTATAGGTGGCATTCTATCTAATAATAAG GGTATTAATAAATTAGGTGGTGGTTTATCAGCAGATGCATTAACAGAAAAAGATAAAAAAGATATAATTCTTGCTTCTGA AATTGATGTAGATTATTTGGCCGTATCGTTCCCTCGTTGTGCTGATGATTTAATAAAAGCCAGAGAGTTATTAAAAAAAT CTGGTAGTAACGCTCAAATTATAGCTAAAATAGAAAGAGCCGAAGCTGTATTTGATCAAAATGCTATAGAAAATATAATA TTGTCTTCAGATGCAATTATGATTGCTAGAGGAGACTTAGGTGTCGAAATTGGTGATGCAGAATTGGTAGGTATTCAAAA AAAATTAATTAGAACTGCTAGAAAATTAAATAAGGTAGCAATTACTGCAACACAAATGATGGAATCAATGATTTTAAATC CGTTACCTACTCGTGCAGAAGTTATGGATGTAGCCAATGCTGTGTTAGATGGAAGCGATGCAGTCATGCTGTCTGCGGAA ACTGCATCTGGAAAATATCCATCTGAAACTGTGATAAGTATGGCTAAAGTTTGCAAAGGGGCAGAAAAAGTTCCTAGTAT TAATGTTTCTAGACATCGTCTTAATGTAGAATTTCAAAGCATTGAGGAAGCCATTGCTATGTCATCAATGTATGCGGCGA ATCACTTAAAAGGAATTACAGCAATTATTACTATGACAGAATCTGGTAAAACAGCATTAATGACTTCTAGAATTACTTCT GGACTACCGATTTTTGCTTTATCAAAACATAAAAAAACTTTAAATTTAACTGCTCTCTATAGAGGTGTGATTCCTATTTA TTTTGATAGTGATAAGGATGGTGTTGAAGCTGCTAATGAAGCAATAATTCTTTTGTGCAAGAAAAAATTTCTATTTAATA ATGATTTAGTCATTGTCACTCAAGGTGACATAATGGGGAAAATAGGTAAAACGAATACCAGTAGAATTTTAAGAGTTACA TATTAA
Upstream 100 bases:
>100_bases TTTTATTAAAAACTGATTATAAAATTTCTTACTCTTTTATATTTCGATTAAATTTTTAAAATTTTAAAATACATATAATT AATAAAATTAAGAGGTTTTT
Downstream 100 bases:
>100_bases AAATTTCTATTAGAAAAACTTATTTTAATTTTGATAATATGTTTTTAGACTCTTTTAAATATTTGATTCTTTCACTTTTT GTTAGCTGTGTCGACAAAAT
Product: pyruvate kinase
Products: NA
Alternate protein names: PK
Number of amino acids: Translated: 481; Mature: 481
Protein sequence:
>481_residues MLNRVRRTKIVATLGPSTDKANNLEKIILSGANVLRLNFSHGSSEEHKKRAKKAKEIMFKLNCHIALLGDLQGPKIRISK FKKNSIFLKVNDVFILDANLNEKNGNNERVGIDYKKLPNDLNVNDILLLDDGRIQLKVIKIEKCAIFTKVIIGGILSNNK GINKLGGGLSADALTEKDKKDIILASEIDVDYLAVSFPRCADDLIKARELLKKSGSNAQIIAKIERAEAVFDQNAIENII LSSDAIMIARGDLGVEIGDAELVGIQKKLIRTARKLNKVAITATQMMESMILNPLPTRAEVMDVANAVLDGSDAVMLSAE TASGKYPSETVISMAKVCKGAEKVPSINVSRHRLNVEFQSIEEAIAMSSMYAANHLKGITAIITMTESGKTALMTSRITS GLPIFALSKHKKTLNLTALYRGVIPIYFDSDKDGVEAANEAIILLCKKKFLFNNDLVIVTQGDIMGKIGKTNTSRILRVT Y
Sequences:
>Translated_481_residues MLNRVRRTKIVATLGPSTDKANNLEKIILSGANVLRLNFSHGSSEEHKKRAKKAKEIMFKLNCHIALLGDLQGPKIRISK FKKNSIFLKVNDVFILDANLNEKNGNNERVGIDYKKLPNDLNVNDILLLDDGRIQLKVIKIEKCAIFTKVIIGGILSNNK GINKLGGGLSADALTEKDKKDIILASEIDVDYLAVSFPRCADDLIKARELLKKSGSNAQIIAKIERAEAVFDQNAIENII LSSDAIMIARGDLGVEIGDAELVGIQKKLIRTARKLNKVAITATQMMESMILNPLPTRAEVMDVANAVLDGSDAVMLSAE TASGKYPSETVISMAKVCKGAEKVPSINVSRHRLNVEFQSIEEAIAMSSMYAANHLKGITAIITMTESGKTALMTSRITS GLPIFALSKHKKTLNLTALYRGVIPIYFDSDKDGVEAANEAIILLCKKKFLFNNDLVIVTQGDIMGKIGKTNTSRILRVT Y >Mature_481_residues MLNRVRRTKIVATLGPSTDKANNLEKIILSGANVLRLNFSHGSSEEHKKRAKKAKEIMFKLNCHIALLGDLQGPKIRISK FKKNSIFLKVNDVFILDANLNEKNGNNERVGIDYKKLPNDLNVNDILLLDDGRIQLKVIKIEKCAIFTKVIIGGILSNNK GINKLGGGLSADALTEKDKKDIILASEIDVDYLAVSFPRCADDLIKARELLKKSGSNAQIIAKIERAEAVFDQNAIENII LSSDAIMIARGDLGVEIGDAELVGIQKKLIRTARKLNKVAITATQMMESMILNPLPTRAEVMDVANAVLDGSDAVMLSAE TASGKYPSETVISMAKVCKGAEKVPSINVSRHRLNVEFQSIEEAIAMSSMYAANHLKGITAIITMTESGKTALMTSRITS GLPIFALSKHKKTLNLTALYRGVIPIYFDSDKDGVEAANEAIILLCKKKFLFNNDLVIVTQGDIMGKIGKTNTSRILRVT Y
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family
Homologues:
Organism=Homo sapiens, GI33286422, Length=511, Percent_Identity=35.812133072407, Blast_Score=245, Evalue=8e-65, Organism=Homo sapiens, GI33286420, Length=511, Percent_Identity=35.812133072407, Blast_Score=245, Evalue=8e-65, Organism=Homo sapiens, GI33286418, Length=511, Percent_Identity=35.6164383561644, Blast_Score=239, Evalue=5e-63, Organism=Homo sapiens, GI10835121, Length=510, Percent_Identity=33.1372549019608, Blast_Score=229, Evalue=5e-60, Organism=Homo sapiens, GI32967597, Length=510, Percent_Identity=33.1372549019608, Blast_Score=229, Evalue=5e-60, Organism=Homo sapiens, GI310128732, Length=297, Percent_Identity=34.6801346801347, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI310128730, Length=297, Percent_Identity=34.6801346801347, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI310128736, Length=246, Percent_Identity=33.739837398374, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI310128734, Length=246, Percent_Identity=33.739837398374, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI310128738, Length=222, Percent_Identity=33.7837837837838, Blast_Score=94, Evalue=2e-19, Organism=Escherichia coli, GI1788160, Length=479, Percent_Identity=69.5198329853862, Blast_Score=704, Evalue=0.0, Organism=Escherichia coli, GI1787965, Length=477, Percent_Identity=38.7840670859539, Blast_Score=290, Evalue=1e-79, Organism=Caenorhabditis elegans, GI17544584, Length=492, Percent_Identity=34.7560975609756, Blast_Score=256, Evalue=2e-68, Organism=Caenorhabditis elegans, GI71984406, Length=498, Percent_Identity=36.144578313253, Blast_Score=235, Evalue=5e-62, Organism=Caenorhabditis elegans, GI17506829, Length=498, Percent_Identity=36.144578313253, Blast_Score=235, Evalue=5e-62, Organism=Caenorhabditis elegans, GI71984413, Length=498, Percent_Identity=36.144578313253, Blast_Score=234, Evalue=5e-62, Organism=Caenorhabditis elegans, GI17506831, Length=498, Percent_Identity=36.144578313253, Blast_Score=234, Evalue=6e-62, Organism=Saccharomyces cerevisiae, GI6319279, Length=448, Percent_Identity=35.0446428571429, Blast_Score=238, Evalue=2e-63, Organism=Saccharomyces cerevisiae, GI6324923, Length=495, Percent_Identity=31.7171717171717, Blast_Score=224, Evalue=2e-59, Organism=Drosophila melanogaster, GI24648964, Length=494, Percent_Identity=36.4372469635627, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI28571814, Length=494, Percent_Identity=36.4372469635627, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI24648966, Length=421, Percent_Identity=34.4418052256532, Blast_Score=215, Evalue=4e-56, Organism=Drosophila melanogaster, GI24581235, Length=433, Percent_Identity=31.8706697459584, Blast_Score=214, Evalue=7e-56, Organism=Drosophila melanogaster, GI24646914, Length=281, Percent_Identity=34.5195729537367, Blast_Score=142, Evalue=5e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KPYK_BUCAP (Q8K9M3)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660654.1 - ProteinModelPortal: Q8K9M3 - SMR: Q8K9M3 - EnsemblBacteria: EBBUCT00000000272 - GeneID: 1005515 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg311 - GeneTree: EBGT00050000007890 - HOGENOM: HBG734376 - OMA: SRSRQLN - ProtClustDB: CLSK315882 - BioCyc: BAPH198804:BUSG311-MONOMER - GO: GO:0006096 - InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 - Gene3D: G3DSA:2.40.33.10 - Gene3D: G3DSA:3.20.20.60 - Gene3D: G3DSA:3.40.1380.20 - PANTHER: PTHR11817 - PRINTS: PR01050 - TIGRFAMs: TIGR01064
Pfam domain/function: PF00224 PK; PF02887 PK_C; SSF50800 PK_B_barrel_like; SSF52935 Pyruvate_kinase; SSF51621 Pyrv/PenolPyrv_Kinase_cat
EC number: =2.7.1.40
Molecular weight: Translated: 52632; Mature: 52632
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: BINDING 36-36 BINDING 251-251 BINDING 252-252 BINDING 284-284
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNRVRRTKIVATLGPSTDKANNLEKIILSGANVLRLNFSHGSSEEHKKRAKKAKEIMFK CCCCCCEEEEEEEECCCCCCCCCHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHEEEE LNCHIALLGDLQGPKIRISKFKKNSIFLKVNDVFILDANLNEKNGNNERVGIDYKKLPND EEEEEEEEECCCCCEEEEEEECCCEEEEEEEEEEEEECCCCCCCCCCCEEECCHHHCCCC LNVNDILLLDDGRIQLKVIKIEKCAIFTKVIIGGILSNNKGINKLGGGLSADALTEKDKK CCCCEEEEEECCEEEEEEEEEHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHCCCCCC DIILASEIDVDYLAVSFPRCADDLIKARELLKKSGSNAQIIAKIERAEAVFDQNAIENII CEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHE LSSDAIMIARGDLGVEIGDAELVGIQKKLIRTARKLNKVAITATQMMESMILNPLPTRAE ECCCEEEEEECCCCEEECCCCEEHHHHHHHHHHHHHHHHEEEHHHHHHHHHCCCCCCHHH VMDVANAVLDGSDAVMLSAETASGKYPSETVISMAKVCKGAEKVPSINVSRHRLNVEFQS HHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCHHHCCCCCCEEEEEEEEHHH IEEAIAMSSMYAANHLKGITAIITMTESGKTALMTSRITSGLPIFALSKHKKTLNLTALY HHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEHHHCCCCCEEEEECCCCEEEEEEEE RGVIPIYFDSDKDGVEAANEAIILLCKKKFLFNNDLVIVTQGDIMGKIGKTNTSRILRVT CCCEEEEECCCCCCCHHCCCEEEEEEEHHHEECCCEEEEECCCEEECCCCCCCCEEEEEE Y C >Mature Secondary Structure MLNRVRRTKIVATLGPSTDKANNLEKIILSGANVLRLNFSHGSSEEHKKRAKKAKEIMFK CCCCCCEEEEEEEECCCCCCCCCHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHEEEE LNCHIALLGDLQGPKIRISKFKKNSIFLKVNDVFILDANLNEKNGNNERVGIDYKKLPND EEEEEEEEECCCCCEEEEEEECCCEEEEEEEEEEEEECCCCCCCCCCCEEECCHHHCCCC LNVNDILLLDDGRIQLKVIKIEKCAIFTKVIIGGILSNNKGINKLGGGLSADALTEKDKK CCCCEEEEEECCEEEEEEEEEHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHCCCCCC DIILASEIDVDYLAVSFPRCADDLIKARELLKKSGSNAQIIAKIERAEAVFDQNAIENII CEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHE LSSDAIMIARGDLGVEIGDAELVGIQKKLIRTARKLNKVAITATQMMESMILNPLPTRAE ECCCEEEEEECCCCEEECCCCEEHHHHHHHHHHHHHHHHEEEHHHHHHHHHCCCCCCHHH VMDVANAVLDGSDAVMLSAETASGKYPSETVISMAKVCKGAEKVPSINVSRHRLNVEFQS HHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCHHHCCCCCCEEEEEEEEHHH IEEAIAMSSMYAANHLKGITAIITMTESGKTALMTSRITSGLPIFALSKHKKTLNLTALY HHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEHHHCCCCCEEEEECCCCEEEEEEEE RGVIPIYFDSDKDGVEAANEAIILLCKKKFLFNNDLVIVTQGDIMGKIGKTNTSRILRVT CCCEEEEECCCCCCCHHCCCEEEEEEEHHHEECCCEEEEECCCEEECCCCCCCCEEEEEE Y C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12089438