| Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
|---|---|
| Accession | NC_004061 |
| Length | 641,454 |
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The map label for this gene is aroA
Identifier: 21672577
GI number: 21672577
Start: 344439
End: 345725
Strand: Reverse
Name: aroA
Synonym: BUsg301
Alternate gene names: 21672577
Gene position: 345725-344439 (Counterclockwise)
Preceding gene: 21672578
Following gene: 21672576
Centisome position: 53.9
GC content: 29.99
Gene sequence:
>1287_bases ATGCAAAAATTTTTGGAGTTAAAACCAGTTTCTTATATTAATGGAACGATTTATTTACCTGGTTCAAAAAGTATATCGAA CAGAGTTTTACTGTTATCTGCTATGGCTAATGGTATTACTTGTTTGACAAATTTACTAGATAGTCAAGATACTCAATATA TGTTAAATGCTTTAAGAAAAATTGGGATCAAATTTTTTTTATCAAATAATAATACTACTTGTCATGTCCATGGTATTGGA AAAGCTTTTCATTTATCGCATCCTATTTCATTATTTTTAGGCAATGCGGGAACAGCTATGCGACCACTTCTTGCTGCTTT ATCGTTATATGAAAACAATGTTGTCTTAAGTGGAGATGACAGAATGCATGAAAGACCGATTGCACATCTTGTTGATGCTC TCAAACAAGGTGGAGCAACTCTTGAATATAAAAAAGGTATAGGATATCCTCCTGTTTTGACGAAAGGTGGGTTTAAAGGT GGTTCTATTATGCTAGATGGAAGTATTTCTAGTCAATTTTTAACATCTTTATTAATGGTTGCACCACTAGCATTACAAAA TACTAATATATTTATTAAAGGAAATTTGGTTTCTAAACCTTACATTGATATCACATTAAATCTCATGAAATCTTTTGGTG TCAATATTGTAAATGATTGTTATAAATCTTTTTATATAAAAGGGAATCAAAAATATGAATCACCAGGAAATTACTTAGTT GAAGGCGATGCATCTTCAGCATCATATTTTTTAGCTGCTGCTGCTATTAAAGGTGGTTCGGTAAAAGTTGTTGGAGTTGG TAAAAAAAGCGTTCAGGGTGATATAAAATTTGCTGATGTACTTGAAAAAATGGGAGCTATTATTGATTGGGGTGATTCTT TCATTGTTTGCAGGCATAATAAATTAGAAAAAATAGATTTAGATATGAATCATATCCCTGATGCAGCAATGACTATTGCA ATAGTAGCTCTTTTTGCAAAAGGAACTTCAATTATTAAAAATATATATAACTGGCGTGTTAAAGAAACTGATCGATTATC TGCAATGAGTAAAGAATTAAAAAAAGTTGGTGCAATAATTAAAGAAGGAAGAGATTGTTTATCTATTACTCCTCCTAATT TTTTCAAATTTGCAGAAATTGATACATATAATGATCATCGTATGGCTATGTGTTTTTCTCTCATATGTTTATCTGGAATA AGTGTTAGGATACTTAATCCAAATTGTATTTCTAAAACTTTTCCATCTTATTTTGAAAATTTTTTAAAGATTAGCAGATT TGATTGA
Upstream 100 bases:
>100_bases AAATTTATGTTATATTTTGAAAAAAAGTATGGATAAAACATTTTTTTATTTTTGAAGAAATAAATTAAAAATTTTATTTT AATTAGAGCGTATTTTTATT
Downstream 100 bases:
>100_bases TTTTTAACATTATAGATAGTTTTATATGTTTAAATTTAATTTTTTTGTACTTTTATAAAAATGAAAAATAAAACTACCTT TTTATCATTAAAGGTTCTGG
Product: 3-phosphoshikimate 1-carboxyvinyltransferase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MQKFLELKPVSYINGTIYLPGSKSISNRVLLLSAMANGITCLTNLLDSQDTQYMLNALRKIGIKFFLSNNNTTCHVHGIG KAFHLSHPISLFLGNAGTAMRPLLAALSLYENNVVLSGDDRMHERPIAHLVDALKQGGATLEYKKGIGYPPVLTKGGFKG GSIMLDGSISSQFLTSLLMVAPLALQNTNIFIKGNLVSKPYIDITLNLMKSFGVNIVNDCYKSFYIKGNQKYESPGNYLV EGDASSASYFLAAAAIKGGSVKVVGVGKKSVQGDIKFADVLEKMGAIIDWGDSFIVCRHNKLEKIDLDMNHIPDAAMTIA IVALFAKGTSIIKNIYNWRVKETDRLSAMSKELKKVGAIIKEGRDCLSITPPNFFKFAEIDTYNDHRMAMCFSLICLSGI SVRILNPNCISKTFPSYFENFLKISRFD
Sequences:
>Translated_428_residues MQKFLELKPVSYINGTIYLPGSKSISNRVLLLSAMANGITCLTNLLDSQDTQYMLNALRKIGIKFFLSNNNTTCHVHGIG KAFHLSHPISLFLGNAGTAMRPLLAALSLYENNVVLSGDDRMHERPIAHLVDALKQGGATLEYKKGIGYPPVLTKGGFKG GSIMLDGSISSQFLTSLLMVAPLALQNTNIFIKGNLVSKPYIDITLNLMKSFGVNIVNDCYKSFYIKGNQKYESPGNYLV EGDASSASYFLAAAAIKGGSVKVVGVGKKSVQGDIKFADVLEKMGAIIDWGDSFIVCRHNKLEKIDLDMNHIPDAAMTIA IVALFAKGTSIIKNIYNWRVKETDRLSAMSKELKKVGAIIKEGRDCLSITPPNFFKFAEIDTYNDHRMAMCFSLICLSGI SVRILNPNCISKTFPSYFENFLKISRFD >Mature_428_residues MQKFLELKPVSYINGTIYLPGSKSISNRVLLLSAMANGITCLTNLLDSQDTQYMLNALRKIGIKFFLSNNNTTCHVHGIG KAFHLSHPISLFLGNAGTAMRPLLAALSLYENNVVLSGDDRMHERPIAHLVDALKQGGATLEYKKGIGYPPVLTKGGFKG GSIMLDGSISSQFLTSLLMVAPLALQNTNIFIKGNLVSKPYIDITLNLMKSFGVNIVNDCYKSFYIKGNQKYESPGNYLV EGDASSASYFLAAAAIKGGSVKVVGVGKKSVQGDIKFADVLEKMGAIIDWGDSFIVCRHNKLEKIDLDMNHIPDAAMTIA IVALFAKGTSIIKNIYNWRVKETDRLSAMSKELKKVGAIIKEGRDCLSITPPNFFKFAEIDTYNDHRMAMCFSLICLSGI SVRILNPNCISKTFPSYFENFLKISRFD
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; sixth step. [C]
COG id: COG0128
COG function: function code E; 5-enolpyruvylshikimate-3-phosphate synthase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the EPSP synthase family
Homologues:
Organism=Escherichia coli, GI1787137, Length=422, Percent_Identity=63.9810426540284, Blast_Score=559, Evalue=1e-160, Organism=Saccharomyces cerevisiae, GI6320332, Length=446, Percent_Identity=37.219730941704, Blast_Score=237, Evalue=3e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROA_BUCAP (Q59178)
Other databases:
- EMBL: L43549 - EMBL: AE013218 - RefSeq: NP_660644.1 - ProteinModelPortal: Q59178 - SMR: Q59178 - EnsemblBacteria: EBBUCT00000000096 - GeneID: 1005505 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg301 - GeneTree: EBGT00050000008084 - HOGENOM: HBG646626 - OMA: GADIEWG - ProtClustDB: PRK02427 - BioCyc: BAPH198804:BUSG301-MONOMER - GO: GO:0005737 - HAMAP: MF_00210 - InterPro: IPR001986 - InterPro: IPR006264 - InterPro: IPR023193 - InterPro: IPR013792 - Gene3D: G3DSA:3.65.10.10 - PIRSF: PIRSF000505 - TIGRFAMs: TIGR01356
Pfam domain/function: PF00275 EPSP_synthase; SSF55205 RNA3'_cycl/enolpyr_transf_A/B
EC number: =2.5.1.19
Molecular weight: Translated: 47030; Mature: 47030
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: PS00104 EPSP_SYNTHASE_1; PS00885 EPSP_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKFLELKPVSYINGTIYLPGSKSISNRVLLLSAMANGITCLTNLLDSQDTQYMLNALRK CCCCCCCCCCEEECCEEEECCCCCCCCCEEEEEHHHCHHHHHHHHHCCCCHHHHHHHHHH IGIKFFLSNNNTTCHVHGIGKAFHLSHPISLFLGNAGTAMRPLLAALSLYENNVVLSGDD CCEEEEEECCCCEEEEEECCCEEECCCCEEEEECCCCHHHHHHHHHHHHHCCCEEECCCC RMHERPIAHLVDALKQGGATLEYKKGIGYPPVLTKGGFKGGSIMLDGSISSQFLTSLLMV CHHCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHH APLALQNTNIFIKGNLVSKPYIDITLNLMKSFGVNIVNDCYKSFYIKGNQKYESPGNYLV HHHEECCCEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHEEECCCCCCCCCCCEEE EGDASSASYFLAAAAIKGGSVKVVGVGKKSVQGDIKFADVLEKMGAIIDWGDSFIVCRHN ECCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHCCCEEECCCCEEEEECC KLEKIDLDMNHIPDAAMTIAIVALFAKGTSIIKNIYNWRVKETDRLSAMSKELKKVGAII CCEEEECCHHHCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH KEGRDCLSITPPNFFKFAEIDTYNDHRMAMCFSLICLSGISVRILNPNCISKTFPSYFEN HCCCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHH FLKISRFD HHHHCCCC >Mature Secondary Structure MQKFLELKPVSYINGTIYLPGSKSISNRVLLLSAMANGITCLTNLLDSQDTQYMLNALRK CCCCCCCCCCEEECCEEEECCCCCCCCCEEEEEHHHCHHHHHHHHHCCCCHHHHHHHHHH IGIKFFLSNNNTTCHVHGIGKAFHLSHPISLFLGNAGTAMRPLLAALSLYENNVVLSGDD CCEEEEEECCCCEEEEEECCCEEECCCCEEEEECCCCHHHHHHHHHHHHHCCCEEECCCC RMHERPIAHLVDALKQGGATLEYKKGIGYPPVLTKGGFKGGSIMLDGSISSQFLTSLLMV CHHCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHH APLALQNTNIFIKGNLVSKPYIDITLNLMKSFGVNIVNDCYKSFYIKGNQKYESPGNYLV HHHEECCCEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHEEECCCCCCCCCCCEEE EGDASSASYFLAAAAIKGGSVKVVGVGKKSVQGDIKFADVLEKMGAIIDWGDSFIVCRHN ECCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHCCCEEECCCCEEEEECC KLEKIDLDMNHIPDAAMTIAIVALFAKGTSIIKNIYNWRVKETDRLSAMSKELKKVGAII CCEEEECCHHHCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH KEGRDCLSITPPNFFKFAEIDTYNDHRMAMCFSLICLSGISVRILNPNCISKTFPSYFEN HCCCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHH FLKISRFD HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8574133; 12089438