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The map label for this gene is yclN [H]

Identifier: 30265128

GI number: 30265128

Start: 4830834

End: 4831838

Strand: Reverse

Name: yclN [H]

Synonym: BA_5329

Alternate gene names: 30265128

Gene position: 4831838-4830834 (Counterclockwise)

Preceding gene: 30265129

Following gene: 30265127

Centisome position: 92.43

GC content: 36.02

Gene sequence:

>1005_bases
ATGATTTCTAGGGTTGAGAATATTTCTCAACCCCAGTTTTATAATCACAATAAAATATGGACAAAACCTTTTATAATAGC
GATTATAGTTGTTATAATTTTAGGGATTATATCACTGTTTACTGGAGTTTATGATATACGTGGACAAGAGGATGGAATGG
AGATGTTTTTCATAACTCGTGTTCCGAGAACAGTGGCATTAATGCTGACTGGAGCTGCAATGGCGATGGCAGGGCTCGTC
ATGCAACTCATTACACAAAATCGTTTTGTCGAACCTACTACAACGGGAACTATTGAATGGTCAAGCTTAGGCCTGCTTTT
TGTGTATTTACTATTTCCTGCCCCGACTTTAGTTCAAAGAATGACTGGTGCAATCATTTTTTCTTTTATAGGAACTATGA
TTTTCTTTCTATTTTTAAGAAGAGTTAAGCTTCGTTCGTCTTTAATTGTCCCGATTATTGGATTGATGCTTGGAGCAGTT
ATTTCTGCAGTATCTACTTTTTTGGGACTCCTTTTTCAAATGACGCAAAGTATTGAAACTTGGTTTGTAGGTTCATTTGC
TAACATTCAGGTAGGAAGATACGAATATTTATGGCTGATCGTTATCGTTACTTTACTTATTTTTATGTATGCGAATAGAT
TGACTTTAGCTGGACTAGGAGAAGATGTCGCAACAAGTCTTGGAGTTAATTACAATCGAATTGTTCTTTTTGGGACTGCT
CTTATCTCTGTTGCAGTTGGAATTGTTGCAGCTGTTATTGGAAACTTACCTTTCTTAGGGTTAATTGTTCCAAATATTGT
TTCCATGTTTAGAGGTGATGATCTTAGAAGTAATTTACCTTGGGTGTGTGTCATCGGAATGGGGACAATAACTGCCTGTG
ACATCATTTCTCGAACAATTATAAAGCCTTTTGAATTACCTGTTTCTTTAATACTTGCATCAGTGGGAGCAGTTGTGTTT
ATTACTATTTTATTGAGAAAAAGAAAACCAAGGAGGCTACGATGA

Upstream 100 bases:

>100_bases
TACACAAATGAATCAATTCAGACTTATATAGAGTTATTTGGAAACCTTGCAAAAACTTTAGCTAAGTAGTGTAAAGGAGT
ACGAAACAGTGTCAAAAAAT

Downstream 100 bases:

>100_bases
TCACATTAGATTATAGAAATAAAGAAAATGTCGAAGTCGATTCTAGCCTTCATAATGAAAGTAGATCAGCTAGCGCTTTT
CGTTCTAAGAAGGAAGCAAG

Product: iron compound ABC transporter, permease protein

Products: ADP; phosphate; cob(I)alamin [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MISRVENISQPQFYNHNKIWTKPFIIAIIVVIILGIISLFTGVYDIRGQEDGMEMFFITRVPRTVALMLTGAAMAMAGLV
MQLITQNRFVEPTTTGTIEWSSLGLLFVYLLFPAPTLVQRMTGAIIFSFIGTMIFFLFLRRVKLRSSLIVPIIGLMLGAV
ISAVSTFLGLLFQMTQSIETWFVGSFANIQVGRYEYLWLIVIVTLLIFMYANRLTLAGLGEDVATSLGVNYNRIVLFGTA
LISVAVGIVAAVIGNLPFLGLIVPNIVSMFRGDDLRSNLPWVCVIGMGTITACDIISRTIIKPFELPVSLILASVGAVVF
ITILLRKRKPRRLR

Sequences:

>Translated_334_residues
MISRVENISQPQFYNHNKIWTKPFIIAIIVVIILGIISLFTGVYDIRGQEDGMEMFFITRVPRTVALMLTGAAMAMAGLV
MQLITQNRFVEPTTTGTIEWSSLGLLFVYLLFPAPTLVQRMTGAIIFSFIGTMIFFLFLRRVKLRSSLIVPIIGLMLGAV
ISAVSTFLGLLFQMTQSIETWFVGSFANIQVGRYEYLWLIVIVTLLIFMYANRLTLAGLGEDVATSLGVNYNRIVLFGTA
LISVAVGIVAAVIGNLPFLGLIVPNIVSMFRGDDLRSNLPWVCVIGMGTITACDIISRTIIKPFELPVSLILASVGAVVF
ITILLRKRKPRRLR
>Mature_334_residues
MISRVENISQPQFYNHNKIWTKPFIIAIIVVIILGIISLFTGVYDIRGQEDGMEMFFITRVPRTVALMLTGAAMAMAGLV
MQLITQNRFVEPTTTGTIEWSSLGLLFVYLLFPAPTLVQRMTGAIIFSFIGTMIFFLFLRRVKLRSSLIVPIIGLMLGAV
ISAVSTFLGLLFQMTQSIETWFVGSFANIQVGRYEYLWLIVIVTLLIFMYANRLTLAGLGEDVATSLGVNYNRIVLFGTA
LISVAVGIVAAVIGNLPFLGLIVPNIVSMFRGDDLRSNLPWVCVIGMGTITACDIISRTIIKPFELPVSLILASVGAVVF
ITILLRKRKPRRLR

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG4606

COG function: function code P; ABC-type enterochelin transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788004, Length=285, Percent_Identity=31.5789473684211, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1790740, Length=331, Percent_Identity=27.190332326284, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1790741, Length=279, Percent_Identity=25.089605734767, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1786805, Length=301, Percent_Identity=27.2425249169435, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 37020; Mature: 37020

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISRVENISQPQFYNHNKIWTKPFIIAIIVVIILGIISLFTGVYDIRGQEDGMEMFFITR
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC
VPRTVALMLTGAAMAMAGLVMQLITQNRFVEPTTTGTIEWSSLGLLFVYLLFPAPTLVQR
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHCCHHHHHH
MTGAIIFSFIGTMIFFLFLRRVKLRSSLIVPIIGLMLGAVISAVSTFLGLLFQMTQSIET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WFVGSFANIQVGRYEYLWLIVIVTLLIFMYANRLTLAGLGEDVATSLGVNYNRIVLFGTA
HHCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCHHEECCCHHHHHHHCCCCCHHHHHHHH
LISVAVGIVAAVIGNLPFLGLIVPNIVSMFRGDDLRSNLPWVCVIGMGTITACDIISRTI
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHH
IKPFELPVSLILASVGAVVFITILLRKRKPRRLR
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MISRVENISQPQFYNHNKIWTKPFIIAIIVVIILGIISLFTGVYDIRGQEDGMEMFFITR
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC
VPRTVALMLTGAAMAMAGLVMQLITQNRFVEPTTTGTIEWSSLGLLFVYLLFPAPTLVQR
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHCCHHHHHH
MTGAIIFSFIGTMIFFLFLRRVKLRSSLIVPIIGLMLGAVISAVSTFLGLLFQMTQSIET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WFVGSFANIQVGRYEYLWLIVIVTLLIFMYANRLTLAGLGEDVATSLGVNYNRIVLFGTA
HHCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCHHEECCCHHHHHHHCCCCCHHHHHHHH
LISVAVGIVAAVIGNLPFLGLIVPNIVSMFRGDDLRSNLPWVCVIGMGTITACDIISRTI
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHH
IKPFELPVSLILASVGAVVFITILLRKRKPRRLR
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; cob(I)alamin [Periplasm]; H2O [C]

Specific reaction: ATP + cob(I)alamin [Periplasm] + H2O = ADP + phosphate + cob(I)alamin [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]