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The map label for this gene is glgA

Identifier: 30264929

GI number: 30264929

Start: 4641734

End: 4643164

Strand: Reverse

Name: glgA

Synonym: BA_5120

Alternate gene names: 30264929

Gene position: 4643164-4641734 (Counterclockwise)

Preceding gene: 30264930

Following gene: 30264928

Centisome position: 88.83

GC content: 36.83

Gene sequence:

>1431_bases
GTGAATATTTTATTTGCAGTATCAGAATGTGTGCCATTTGTGAAATCTGGAGGATTAGCTGATGTAGCAGGTGCGCTCCC
AAAAGAGCTAAAAAAATTAGGTGTGGAAGTTCGCATTATACTTCCGAATTATAGTCTTATTCCGCAAAAATTAAGGGATG
GATGTACGCTACATAAAGTAATTAACGTCCCGCTTGGCTGGAGAAATCAATATTGTGGAATTTTAAAAGGTGAGCAAGAC
GGGATTACGTATTACTTAATAGATAATGAATATTATTTTAAGAGGGATTCTCTGTATGGTCATTATGATGATGGAGAGCG
TTTTTCTTATTTCTCGAAAGCAGTATTAGAGTGTATTCCGCATCTTGATTTCGAAGTGGATGTTCTTCATAGCCATGATT
GGCATACAGCCATGGTGAATTTTTTACTGCGTGAAAAGTATCAAGATAACCCGTTATATGAGCATATTAAAACGGTATAT
ACGATTCATAACTTGCAGTTCCAAGGTGTATTTCCTCCTGAAGTGATGTACGACTTGTTAGAACTTGGTGATGAATATTT
TCATAGTGAGCAGTTAGAGTTTTATGGAAATGTGAACTTTATGAAGGGGGGCATTATCGCTTCTGATCAAATTACAGCGG
TTAGCCCGACGTACAAAGAAGAAATTCAATATGAATTTTTCGGTGAGAAGTTAGATGGATTACTGCGAAAATATAATGAT
AAGCTTAGCGGCATTGTAAATGGAATTGATACGAGCGTGTACAATCCAGAAACGGATTCGTATATTACTGCGCAGTATGA
TGCAGATTCATTATATGAAAAGAATGAAAATAAACGCGCGTTGCAGCGTTATTTTGGTTTGCCAGAAAAAGAAGATACAC
CAATTATTTCAATGGTAACGAGATTAACGAAGCAAAAAGGTCTTGATTTAGTACGTACTGTATTCCGAGAAATAATGGAA
GAAGATGTACAATGTATTATTTTAGGATCAGGTGATTCGGAATATGAACAATTCTTTGAGTGGATGGCATATGAGTATCC
TGAGAAGGTAAAAGTGTATATCGGCTTTAATGAGGAGTTAGCTCACCAAGTGTATGCGGGAAGTGATTTATTCTTAATGC
CATCACTGTTTGAGCCGTGTGGCCTTGGACAACTTATCGCATTAGCGTATGGTACGATTCCAATTGTAAGGGAAACAGGC
GGATTAAATGATACGGTACAATCTTATGATGAAGAAACTGGAGAAGGAAATGGTTTCAGTTTCACGAACTTTAATGCACA
TGATATGTTGCACACGGTTCTTCGTGCAATTGAATTTTATCATGATAAATCGGTATGGGAGCAGCTTGTAAAACAAGCGA
TGACTGAAGATTATAGCTGGGAGAAATCAGCTCTTGCTTATAAGAAATTGTATAAAAGTCTCATGGAATAA

Upstream 100 bases:

>100_bases
GGTCTTTCCTCCACTGATTAAAGTTTTAATTTAAATGAAAACTCGAAGGGAGGAAGCTGCAAGGGAAGTAGTAGAAGCTT
TTCGTGCAGTGGGACAACAA

Downstream 100 bases:

>100_bases
CATGTAGGTGGTGAAGAAATGTTTACTCATGTTGAAAGTTTCAAATCAGCTTTTCTAGAAAAGTTAGAAACGATGTATGG
TAAAAGTTTCAAAGACTCTA

Product: glycogen synthase

Products: NA

Alternate protein names: Starch [bacterial glycogen] synthase

Number of amino acids: Translated: 476; Mature: 476

Protein sequence:

>476_residues
MNILFAVSECVPFVKSGGLADVAGALPKELKKLGVEVRIILPNYSLIPQKLRDGCTLHKVINVPLGWRNQYCGILKGEQD
GITYYLIDNEYYFKRDSLYGHYDDGERFSYFSKAVLECIPHLDFEVDVLHSHDWHTAMVNFLLREKYQDNPLYEHIKTVY
TIHNLQFQGVFPPEVMYDLLELGDEYFHSEQLEFYGNVNFMKGGIIASDQITAVSPTYKEEIQYEFFGEKLDGLLRKYND
KLSGIVNGIDTSVYNPETDSYITAQYDADSLYEKNENKRALQRYFGLPEKEDTPIISMVTRLTKQKGLDLVRTVFREIME
EDVQCIILGSGDSEYEQFFEWMAYEYPEKVKVYIGFNEELAHQVYAGSDLFLMPSLFEPCGLGQLIALAYGTIPIVRETG
GLNDTVQSYDEETGEGNGFSFTNFNAHDMLHTVLRAIEFYHDKSVWEQLVKQAMTEDYSWEKSALAYKKLYKSLME

Sequences:

>Translated_476_residues
MNILFAVSECVPFVKSGGLADVAGALPKELKKLGVEVRIILPNYSLIPQKLRDGCTLHKVINVPLGWRNQYCGILKGEQD
GITYYLIDNEYYFKRDSLYGHYDDGERFSYFSKAVLECIPHLDFEVDVLHSHDWHTAMVNFLLREKYQDNPLYEHIKTVY
TIHNLQFQGVFPPEVMYDLLELGDEYFHSEQLEFYGNVNFMKGGIIASDQITAVSPTYKEEIQYEFFGEKLDGLLRKYND
KLSGIVNGIDTSVYNPETDSYITAQYDADSLYEKNENKRALQRYFGLPEKEDTPIISMVTRLTKQKGLDLVRTVFREIME
EDVQCIILGSGDSEYEQFFEWMAYEYPEKVKVYIGFNEELAHQVYAGSDLFLMPSLFEPCGLGQLIALAYGTIPIVRETG
GLNDTVQSYDEETGEGNGFSFTNFNAHDMLHTVLRAIEFYHDKSVWEQLVKQAMTEDYSWEKSALAYKKLYKSLME
>Mature_476_residues
MNILFAVSECVPFVKSGGLADVAGALPKELKKLGVEVRIILPNYSLIPQKLRDGCTLHKVINVPLGWRNQYCGILKGEQD
GITYYLIDNEYYFKRDSLYGHYDDGERFSYFSKAVLECIPHLDFEVDVLHSHDWHTAMVNFLLREKYQDNPLYEHIKTVY
TIHNLQFQGVFPPEVMYDLLELGDEYFHSEQLEFYGNVNFMKGGIIASDQITAVSPTYKEEIQYEFFGEKLDGLLRKYND
KLSGIVNGIDTSVYNPETDSYITAQYDADSLYEKNENKRALQRYFGLPEKEDTPIISMVTRLTKQKGLDLVRTVFREIME
EDVQCIILGSGDSEYEQFFEWMAYEYPEKVKVYIGFNEELAHQVYAGSDLFLMPSLFEPCGLGQLIALAYGTIPIVRETG
GLNDTVQSYDEETGEGNGFSFTNFNAHDMLHTVLRAIEFYHDKSVWEQLVKQAMTEDYSWEKSALAYKKLYKSLME

Specific function: Synthesizes alpha-1,4-glucan chains using ADP-glucose

COG id: COG0297

COG function: function code G; Glycogen synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily

Homologues:

Organism=Escherichia coli, GI1789836, Length=491, Percent_Identity=38.0855397148676, Blast_Score=334, Evalue=8e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLGA_BACAN (Q81K85)

Other databases:

- EMBL:   AE016879
- EMBL:   AE017334
- EMBL:   AE017225
- RefSeq:   NP_847306.1
- RefSeq:   YP_021773.2
- RefSeq:   YP_031002.1
- ProteinModelPortal:   Q81K85
- SMR:   Q81K85
- IntAct:   Q81K85
- EnsemblBacteria:   EBBACT00000008312
- EnsemblBacteria:   EBBACT00000017669
- EnsemblBacteria:   EBBACT00000022941
- GeneID:   1084436
- GeneID:   2819822
- GeneID:   2849958
- GenomeReviews:   AE016879_GR
- GenomeReviews:   AE017225_GR
- GenomeReviews:   AE017334_GR
- KEGG:   ban:BA_5120
- KEGG:   bar:GBAA_5120
- KEGG:   bat:BAS4758
- TIGR:   BA_5120
- TIGR:   GBAA_5120
- GeneTree:   EBGT00050000003331
- HOGENOM:   HBG596384
- OMA:   IYLVGHP
- ProtClustDB:   PRK00654
- BioCyc:   BANT260799:BAS4758-MONOMER
- BioCyc:   BANT261594:GBAA5120-MONOMER
- BRENDA:   2.4.1.21
- HAMAP:   MF_00484
- InterPro:   IPR011835
- InterPro:   IPR001296
- InterPro:   IPR013534
- TIGRFAMs:   TIGR02095

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1

EC number: =2.4.1.21

Molecular weight: Translated: 54946; Mature: 54946

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: BINDING 15-15

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILFAVSECVPFVKSGGLADVAGALPKELKKLGVEVRIILPNYSLIPQKLRDGCTLHKV
CCEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCCEEEHH
INVPLGWRNQYCGILKGEQDGITYYLIDNEYYFKRDSLYGHYDDGERFSYFSKAVLECIP
HCCCCCCCCCCCCEEECCCCCEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHC
HLDFEVDVLHSHDWHTAMVNFLLREKYQDNPLYEHIKTVYTIHNLQFQGVFPPEVMYDLL
CCCCEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEECCCCCHHHHHHHH
ELGDEYFHSEQLEFYGNVNFMKGGIIASDQITAVSPTYKEEIQYEFFGEKLDGLLRKYND
HHHHHHHCCCCHHHCCCCEEEECCEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
KLSGIVNGIDTSVYNPETDSYITAQYDADSLYEKNENKRALQRYFGLPEKEDTPIISMVT
HHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHH
RLTKQKGLDLVRTVFREIMEEDVQCIILGSGDSEYEQFFEWMAYEYPEKVKVYIGFNEEL
HHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCHHH
AHQVYAGSDLFLMPSLFEPCGLGQLIALAYGTIPIVRETGGLNDTVQSYDEETGEGNGFS
HHHHHCCCCEEECCHHCCCCCCHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCCCCCEE
FTNFNAHDMLHTVLRAIEFYHDKSVWEQLVKQAMTEDYSWEKSALAYKKLYKSLME
ECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNILFAVSECVPFVKSGGLADVAGALPKELKKLGVEVRIILPNYSLIPQKLRDGCTLHKV
CCEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCCEEEHH
INVPLGWRNQYCGILKGEQDGITYYLIDNEYYFKRDSLYGHYDDGERFSYFSKAVLECIP
HCCCCCCCCCCCCEEECCCCCEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHC
HLDFEVDVLHSHDWHTAMVNFLLREKYQDNPLYEHIKTVYTIHNLQFQGVFPPEVMYDLL
CCCCEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEECCCCCHHHHHHHH
ELGDEYFHSEQLEFYGNVNFMKGGIIASDQITAVSPTYKEEIQYEFFGEKLDGLLRKYND
HHHHHHHCCCCHHHCCCCEEEECCEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
KLSGIVNGIDTSVYNPETDSYITAQYDADSLYEKNENKRALQRYFGLPEKEDTPIISMVT
HHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHH
RLTKQKGLDLVRTVFREIMEEDVQCIILGSGDSEYEQFFEWMAYEYPEKVKVYIGFNEEL
HHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCHHH
AHQVYAGSDLFLMPSLFEPCGLGQLIALAYGTIPIVRETGGLNDTVQSYDEETGEGNGFS
HHHHHCCCCEEECCHHCCCCCCHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCCCCCEE
FTNFNAHDMLHTVLRAIEFYHDKSVWEQLVKQAMTEDYSWEKSALAYKKLYKSLME
ECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12721629