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The map label for this gene is ytmP [H]

Identifier: 30264772

GI number: 30264772

Start: 4495893

End: 4496684

Strand: Reverse

Name: ytmP [H]

Synonym: BA_4952

Alternate gene names: 30264772

Gene position: 4496684-4495893 (Counterclockwise)

Preceding gene: 30264773

Following gene: 30264770

Centisome position: 86.02

GC content: 39.14

Gene sequence:

>792_bases
ATGGAATGGTTGGAACAATTATTAGGAAAAGAGTGGAGTCTTGTACCGGCTGGTGGAGTAACGGGCGATGCATATATTGC
GCAAAACGGACAACAGAAGTTATTTTTAAAGCGGAATACATCGCCCTTTTTAGCGGTATTGTCAGCAGAAGGAATTGTTC
CAAAATTACTTTGGACAAGAAGGGTAACGAACGGTGATGTAATTTCTGCTCAAAAATGGCTTCCGGGACAGAAGTTAGAG
CCAGAGGATATGAAACTAGAACGTGTTGCGAAACTTTTGAAGAAAATACACTCCTCTAAAGCACTTGTGCAGATGATTCA
GAGACTTGGGAAGCAGCCGCTTCACGCACAAGAGTTATTACAACAACTGCAACTTGTTTTAAGGGGAGATATAAGGGATG
AGGAAACAATTCAGCAAGGTCTTCAATATTTAATGGATTCATTAAAAGATATTGAATACAACGAATTCGTTGTATGCCAT
TGTGATGTAAACCATAACAATTGGCTATTGTCGGATGAAGATGAGTTGTTTTTAATTGATTGGGATGGAGCTGTAATTGC
TGACCCAGCTTTAGACCTCGGTATGTTATTATATTGGTACATTCCGCGCCAAGAATGGAGTGAGTGGCTCGGTTATTATG
ATATTGAAATGGATGAATCACTGCTTAAACGTATGAGATGGTATGTGATAGCGCAAACGATTTTATCTATTCAATGGCAT
ACAACAAAAAAGCAGCAAGCAGAAGCTGAATATTGGCATCAATATTTACAGCAACTACTTGCTTCAGAGTAA

Upstream 100 bases:

>100_bases
TTTACAGTAAAATATATATGAATCCACAACATGTGTAGAAATGTTGCGGTTTTTCTTTTCATAACTATAAAAGATAAGGA
TTTGTTAACGGGTAATGAAT

Downstream 100 bases:

>100_bases
TACTTAAGAAAAATTGTCCATTCCAGCAATCCACTGAGTAAGTTGTTCTTGATTATTGGAAATGTGGTTGTCCAAATTAG
AGGAAGATTTACCCGATTGA

Product: aminoglycoside phosphotransferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MEWLEQLLGKEWSLVPAGGVTGDAYIAQNGQQKLFLKRNTSPFLAVLSAEGIVPKLLWTRRVTNGDVISAQKWLPGQKLE
PEDMKLERVAKLLKKIHSSKALVQMIQRLGKQPLHAQELLQQLQLVLRGDIRDEETIQQGLQYLMDSLKDIEYNEFVVCH
CDVNHNNWLLSDEDELFLIDWDGAVIADPALDLGMLLYWYIPRQEWSEWLGYYDIEMDESLLKRMRWYVIAQTILSIQWH
TTKKQQAEAEYWHQYLQQLLASE

Sequences:

>Translated_263_residues
MEWLEQLLGKEWSLVPAGGVTGDAYIAQNGQQKLFLKRNTSPFLAVLSAEGIVPKLLWTRRVTNGDVISAQKWLPGQKLE
PEDMKLERVAKLLKKIHSSKALVQMIQRLGKQPLHAQELLQQLQLVLRGDIRDEETIQQGLQYLMDSLKDIEYNEFVVCH
CDVNHNNWLLSDEDELFLIDWDGAVIADPALDLGMLLYWYIPRQEWSEWLGYYDIEMDESLLKRMRWYVIAQTILSIQWH
TTKKQQAEAEYWHQYLQQLLASE
>Mature_263_residues
MEWLEQLLGKEWSLVPAGGVTGDAYIAQNGQQKLFLKRNTSPFLAVLSAEGIVPKLLWTRRVTNGDVISAQKWLPGQKLE
PEDMKLERVAKLLKKIHSSKALVQMIQRLGKQPLHAQELLQQLQLVLRGDIRDEETIQQGLQYLMDSLKDIEYNEFVVCH
CDVNHNNWLLSDEDELFLIDWDGAVIADPALDLGMLLYWYIPRQEWSEWLGYYDIEMDESLLKRMRWYVIAQTILSIQWH
TTKKQQAEAEYWHQYLQQLLASE

Specific function: Unknown

COG id: COG0510

COG function: function code M; Predicted choline kinase involved in LPS biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aminoglycoside phosphotransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 30752; Mature: 30752

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWLEQLLGKEWSLVPAGGVTGDAYIAQNGQQKLFLKRNTSPFLAVLSAEGIVPKLLWTR
CCHHHHHHCCCCCEEECCCCCCCHHEECCCCEEEEEEECCCCEEEEEECCCCHHHHHHHH
RVTNGDVISAQKWLPGQKLEPEDMKLERVAKLLKKIHSSKALVQMIQRLGKQPLHAQELL
CCCCCCEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHH
QQLQLVLRGDIRDEETIQQGLQYLMDSLKDIEYNEFVVCHCDVNHNNWLLSDEDELFLID
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEECCCCCEEEEE
WDGAVIADPALDLGMLLYWYIPRQEWSEWLGYYDIEMDESLLKRMRWYVIAQTILSIQWH
CCCCEEECCHHHHHHHHHHHCCHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHHHHHCC
TTKKQQAEAEYWHQYLQQLLASE
CCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEWLEQLLGKEWSLVPAGGVTGDAYIAQNGQQKLFLKRNTSPFLAVLSAEGIVPKLLWTR
CCHHHHHHCCCCCEEECCCCCCCHHEECCCCEEEEEEECCCCEEEEEECCCCHHHHHHHH
RVTNGDVISAQKWLPGQKLEPEDMKLERVAKLLKKIHSSKALVQMIQRLGKQPLHAQELL
CCCCCCEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHH
QQLQLVLRGDIRDEETIQQGLQYLMDSLKDIEYNEFVVCHCDVNHNNWLLSDEDELFLID
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEECCCCCEEEEE
WDGAVIADPALDLGMLLYWYIPRQEWSEWLGYYDIEMDESLLKRMRWYVIAQTILSIQWH
CCCCEEECCHHHHHHHHHHHCCHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHHHHHCC
TTKKQQAEAEYWHQYLQQLLASE
CCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]