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The map label for this gene is 30264593

Identifier: 30264593

GI number: 30264593

Start: 4332101

End: 4332850

Strand: Reverse

Name: 30264593

Synonym: BA_4764

Alternate gene names: NA

Gene position: 4332850-4332101 (Counterclockwise)

Preceding gene: 30264594

Following gene: 30264592

Centisome position: 82.89

GC content: 44.13

Gene sequence:

>750_bases
ATGTCTTCATGGAGAAATAATATAAATGGATATTGTAGTTGTAATAATCAAAATGGTGTACATGTTGATTCATGCTGTTT
TAGTTGCGATGGAACAGTTCCTAAGCTGGGTCCAACAGGTCCGACGGGAGCAACGGGAGCAACAGGAGCAACAGGAGTAA
CGGGAGTAACGGGAGTAACAGGAGCGACAGGAATAACGGGAGCGACAGGAATAACAGGAGCAACAGGAATAACGGGAGTA
ACGGGTCCAACGGGAGCGACAGGAATAACAGGAGCAACGGGTCCAACGGGAGCGACAGGAATAACGGGAGCGACAGGTCC
AACGGGAGTCACAGGTACAAGTATTACGGCGACGTATGCATTTGCAAATAATACGTCAGGGACAGCGATATCGGTACTTC
TTGGTGGAACAAATGTCCCGCTTCCAAATAATCAAAATATCGGTCCGGGGATTACTGTATCTGGGGGAAATACAGTATTT
ACGGTTGCAAATGCTGGGAACTATTATATTTCATATACAATTAATATAACGGCTTCGTTATTAGTCAGTTCGCGGATTAC
AATTAATGGAGCGCCACTTGCTGGGACGATTAATTCTCCTGCGGTAGCAACTACATCATTTAGTGCAACAATTATTACTA
CTCTTGCGGCTGGAAGTGCTATTAGTTTGCAACTATTTGGCTTGTTAGCTGTTGCAACATTATCAACAACTACACCAGGA
GCTGTGTTAACGATAATAAGGTTAAGTTGA

Upstream 100 bases:

>100_bases
GTGTTTATCCTATTAAGTAAATTATTTCTTTGTTAGTTAGATAGGTGTTTTCTAACTAGATGATTGTACTTAAAAGATCG
AAGTAAAGGAAGTGATCAAC

Downstream 100 bases:

>100_bases
ATAATAACTCTCTTACTCTTTTAAGATTAGGAGAGTTTCTACATATAATAAGAAGTTAATGAAGTAAAGCATAGTTATAT
AAAAGTCAGAATATTATGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Triple Helix Repeat-Containing Collagen; Collagen-Like Protein; BclA Protein; Collagen Triple Helix Repeat Domain-Containing Protein; Copper Amine Oxidase Domain Protein

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MSSWRNNINGYCSCNNQNGVHVDSCCFSCDGTVPKLGPTGPTGATGATGATGVTGVTGVTGATGITGATGITGATGITGV
TGPTGATGITGATGPTGATGITGATGPTGVTGTSITATYAFANNTSGTAISVLLGGTNVPLPNNQNIGPGITVSGGNTVF
TVANAGNYYISYTINITASLLVSSRITINGAPLAGTINSPAVATTSFSATIITTLAAGSAISLQLFGLLAVATLSTTTPG
AVLTIIRLS

Sequences:

>Translated_249_residues
MSSWRNNINGYCSCNNQNGVHVDSCCFSCDGTVPKLGPTGPTGATGATGATGVTGVTGVTGATGITGATGITGATGITGV
TGPTGATGITGATGPTGATGITGATGPTGVTGTSITATYAFANNTSGTAISVLLGGTNVPLPNNQNIGPGITVSGGNTVF
TVANAGNYYISYTINITASLLVSSRITINGAPLAGTINSPAVATTSFSATIITTLAAGSAISLQLFGLLAVATLSTTTPG
AVLTIIRLS
>Mature_248_residues
SSWRNNINGYCSCNNQNGVHVDSCCFSCDGTVPKLGPTGPTGATGATGATGVTGVTGVTGATGITGATGITGATGITGVT
GPTGATGITGATGPTGATGITGATGPTGVTGTSITATYAFANNTSGTAISVLLGGTNVPLPNNQNIGPGITVSGGNTVFT
VANAGNYYISYTINITASLLVSSRITINGAPLAGTINSPAVATTSFSATIITTLAAGSAISLQLFGLLAVATLSTTTPGA
VLTIIRLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI56847616, Length=221, Percent_Identity=30.316742081448, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23812; Mature: 23681

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSWRNNINGYCSCNNQNGVHVDSCCFSCDGTVPKLGPTGPTGATGATGATGVTGVTGVT
CCCCCCCCCEEEEECCCCCEEHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GATGITGATGITGATGITGVTGPTGATGITGATGPTGATGITGATGPTGVTGTSITATYA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
FANNTSGTAISVLLGGTNVPLPNNQNIGPGITVSGGNTVFTVANAGNYYISYTINITASL
EECCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCEEEEEEECCCEEEEEEEEEEEEE
LVSSRITINGAPLAGTINSPAVATTSFSATIITTLAAGSAISLQLFGLLAVATLSTTTPG
EEEEEEEECCCCEECCCCCCEEEEECCCCEEEEEHHCCCEEEHHHHHHHHHHHHCCCCCC
AVLTIIRLS
EEEEEEEEC
>Mature Secondary Structure 
SSWRNNINGYCSCNNQNGVHVDSCCFSCDGTVPKLGPTGPTGATGATGATGVTGVTGVT
CCCCCCCCEEEEECCCCCEEHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GATGITGATGITGATGITGVTGPTGATGITGATGPTGATGITGATGPTGVTGTSITATYA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
FANNTSGTAISVLLGGTNVPLPNNQNIGPGITVSGGNTVFTVANAGNYYISYTINITASL
EECCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCEEEEEEECCCEEEEEEEEEEEEE
LVSSRITINGAPLAGTINSPAVATTSFSATIITTLAAGSAISLQLFGLLAVATLSTTTPG
EEEEEEEECCCCEECCCCCCEEEEECCCCEEEEEHHCCCEEEHHHHHHHHHHHHCCCCCC
AVLTIIRLS
EEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA