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The map label for this gene is hxlR [H]

Identifier: 30264389

GI number: 30264389

Start: 4132412

End: 4132786

Strand: Reverse

Name: hxlR [H]

Synonym: BA_4543

Alternate gene names: 30264389

Gene position: 4132786-4132412 (Counterclockwise)

Preceding gene: 30264390

Following gene: 30264388

Centisome position: 79.06

GC content: 35.47

Gene sequence:

>375_bases
ATGTCCGAAAATATTCGAAAAGATATTCAAGAAAAAATACAAAATGGCAATTTTAATTGTGAAAAGGAATTGACGCTGTC
CATTATTAGTGGGAAGTGGAAAGTTGTAATATTATGGCATCTCGGTGTAGAAGGGCCTCATCGTTTTAGTGAATTACAAC
GGTTATTTCCAAGCATTTCTCATAAAGTTTTGTCAAACCAATTAAAAGAGTTAATGGAAGATGGGATTGTTGATCGGACC
GTATACCCAGAAATTCCTCCGCGAGTGGAATATTATATGACGGAATTAGGCATGTCGCTTTTACCAATCGTTGAAATGAT
GTATGATTGGGGAAAAATGCGAATGGAACAAATTCGTAATACGTTAGAGAAGTAA

Upstream 100 bases:

>100_bases
GGCTTCTTTTTTATGTATAATTACTTTTTAGACATCTGAGTGGCTCTCATTTACAATAGTGAGAGAGCTTTTTAGTTCAT
ATAGAGTTAGGAGTTTGTTA

Downstream 100 bases:

>100_bases
AAGAAGCCTCCCGAGCGCGGAGGTTTTCTTTTTAGAAAGGTAGGAGTTATTTTTGGTGCAAGCTGCATATATTCATATTC
CGTTTTGTCAGCATATTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MSENIRKDIQEKIQNGNFNCEKELTLSIISGKWKVVILWHLGVEGPHRFSELQRLFPSISHKVLSNQLKELMEDGIVDRT
VYPEIPPRVEYYMTELGMSLLPIVEMMYDWGKMRMEQIRNTLEK

Sequences:

>Translated_124_residues
MSENIRKDIQEKIQNGNFNCEKELTLSIISGKWKVVILWHLGVEGPHRFSELQRLFPSISHKVLSNQLKELMEDGIVDRT
VYPEIPPRVEYYMTELGMSLLPIVEMMYDWGKMRMEQIRNTLEK
>Mature_123_residues
SENIRKDIQEKIQNGNFNCEKELTLSIISGKWKVVILWHLGVEGPHRFSELQRLFPSISHKVLSNQLKELMEDGIVDRTV
YPEIPPRVEYYMTELGMSLLPIVEMMYDWGKMRMEQIRNTLEK

Specific function: Positive regulator of hxlAB expression [H]

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=114, Percent_Identity=33.3333333333333, Blast_Score=77, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 14667; Mature: 14536

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSENIRKDIQEKIQNGNFNCEKELTLSIISGKWKVVILWHLGVEGPHRFSELQRLFPSIS
CCCHHHHHHHHHHHCCCCCCCHHHHHHEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHH
HKVLSNQLKELMEDGIVDRTVYPEIPPRVEYYMTELGMSLLPIVEMMYDWGKMRMEQIRN
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLEK
HHCC
>Mature Secondary Structure 
SENIRKDIQEKIQNGNFNCEKELTLSIISGKWKVVILWHLGVEGPHRFSELQRLFPSIS
CCHHHHHHHHHHHCCCCCCCHHHHHHEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHH
HKVLSNQLKELMEDGIVDRTVYPEIPPRVEYYMTELGMSLLPIVEMMYDWGKMRMEQIRN
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLEK
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704255; 8969502; 9384377; 1715856 [H]