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The map label for this gene is pbpX [H]

Identifier: 30263450

GI number: 30263450

Start: 3259827

End: 3260960

Strand: Reverse

Name: pbpX [H]

Synonym: BA_3554

Alternate gene names: 30263450

Gene position: 3260960-3259827 (Counterclockwise)

Preceding gene: 30263452

Following gene: 30263448

Centisome position: 62.38

GC content: 33.42

Gene sequence:

>1134_bases
ATGTTAAAGAAATGGTTAATCGTTTTCTTTATTTTTGCTGTTTTTTCTGGAAGTGTCGTTGCACTCATACATGCAAGTAA
AGGTAAGAAATATGATATAAAGGCATTTTCTAATTTGAATAATAAGCAAAAGCACGATATGCAAGAAGTTGATGCCAATG
AGAAAAAGCACTATGAAGTTGTAGCTGGAAAACTAGATCAATATTTAAAAGATAAAGGATTTAATGGTAGTGTTCTTGTA
GCTAGTAAAGACCATGTGATTTTACGAAAAGGTTATGGGTATGCAAATATGAAAGATAAAGTATTCACAACGCCAAGAAC
GAAATATCGCATTGGTTCTATTACGAAAACAGTTGTTGCAATATCTATTATGCAACTAAAAGAAAAAGGAAAATTAAATA
TTGAAGACAATGTAAATAAGTATATTCCATCGTTTCCGGCAGATAAAAATATTACGTTACGAAATTTATTAACGCACACA
TCAGGGTTACCAGATCAAGGAAAAGGTAGGGTGGATGCGGCGTCACGTTTAAAGTTAGTAACCTGGATTGGTTCGCAAGC
GTTACAATTTCCTGCAGGGACAGGATGGAAATATACAGACTATAATTATATGGTGCTTGCGTATATTGTAGAAAAAATTA
CGAATAAACCGCTCGCTGAATACGTGAAAGAAAATATTTTCACTCCTGTTGAAATGCATGAATCTGGAATGGGGGCAACT
CTCCCAGAAGATATTTTTTTAGCAGAAGGTTATACGAGAAAAGATAATGAATTAATAGCTGCACCCCGCTTAAAAATGAA
CTGGTTGTATGGATGTGGTGAAATGTATACGACTGTTGAAGATATGAAAAGGCTAGATGAGGCTATTATGAATGGAAAAC
TGTTATCTAAACAAAGTGTATTAGATATGTTTACTGCATCACCTGCAAGAAAATATGGATTTAGTTTCTATACGTATCCA
GATTATTATCATAACCACGGGGTATTAGCAGGCTGGAATACTTTTAATAATTTTAACTGGGATAAAAAAACATTCGTCAT
ATTGTTCTCTAACGTTCAAAATGGTATGAATGATACATTTAATCAAGAGTTTAGGAAAATGGCGAATGATTTAATAGAAG
GAAACGGAGCATGA

Upstream 100 bases:

>100_bases
TAGGTGAATAATAGGTAGTATTATAAAAAAATGAAAATTAATAGATATAGAATAGAATGGATGCGCGTTAAGTGAAACTA
GATAAAAGAGGGTTCCTATT

Downstream 100 bases:

>100_bases
AAGAGAAAGAGCCTCTAGCGAGAGGCTCTTCTTTTTTATAAAGTTGAAAACTCTTCAACAAGTTCACTAAAACGATTTAA
TGCACTTTCAATCGGTTCTG

Product: penicillin-binding protein, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MLKKWLIVFFIFAVFSGSVVALIHASKGKKYDIKAFSNLNNKQKHDMQEVDANEKKHYEVVAGKLDQYLKDKGFNGSVLV
ASKDHVILRKGYGYANMKDKVFTTPRTKYRIGSITKTVVAISIMQLKEKGKLNIEDNVNKYIPSFPADKNITLRNLLTHT
SGLPDQGKGRVDAASRLKLVTWIGSQALQFPAGTGWKYTDYNYMVLAYIVEKITNKPLAEYVKENIFTPVEMHESGMGAT
LPEDIFLAEGYTRKDNELIAAPRLKMNWLYGCGEMYTTVEDMKRLDEAIMNGKLLSKQSVLDMFTASPARKYGFSFYTYP
DYYHNHGVLAGWNTFNNFNWDKKTFVILFSNVQNGMNDTFNQEFRKMANDLIEGNGA

Sequences:

>Translated_377_residues
MLKKWLIVFFIFAVFSGSVVALIHASKGKKYDIKAFSNLNNKQKHDMQEVDANEKKHYEVVAGKLDQYLKDKGFNGSVLV
ASKDHVILRKGYGYANMKDKVFTTPRTKYRIGSITKTVVAISIMQLKEKGKLNIEDNVNKYIPSFPADKNITLRNLLTHT
SGLPDQGKGRVDAASRLKLVTWIGSQALQFPAGTGWKYTDYNYMVLAYIVEKITNKPLAEYVKENIFTPVEMHESGMGAT
LPEDIFLAEGYTRKDNELIAAPRLKMNWLYGCGEMYTTVEDMKRLDEAIMNGKLLSKQSVLDMFTASPARKYGFSFYTYP
DYYHNHGVLAGWNTFNNFNWDKKTFVILFSNVQNGMNDTFNQEFRKMANDLIEGNGA
>Mature_377_residues
MLKKWLIVFFIFAVFSGSVVALIHASKGKKYDIKAFSNLNNKQKHDMQEVDANEKKHYEVVAGKLDQYLKDKGFNGSVLV
ASKDHVILRKGYGYANMKDKVFTTPRTKYRIGSITKTVVAISIMQLKEKGKLNIEDNVNKYIPSFPADKNITLRNLLTHT
SGLPDQGKGRVDAASRLKLVTWIGSQALQFPAGTGWKYTDYNYMVLAYIVEKITNKPLAEYVKENIFTPVEMHESGMGAT
LPEDIFLAEGYTRKDNELIAAPRLKMNWLYGCGEMYTTVEDMKRLDEAIMNGKLLSKQSVLDMFTASPARKYGFSFYTYP
DYYHNHGVLAGWNTFNNFNWDKKTFVILFSNVQNGMNDTFNQEFRKMANDLIEGNGA

Specific function: Unknown

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential). Note=Localizes to the division septum during vegetative growth, and accumulates at the prespore during sporulation [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the beta-lactamase family [H]

Homologues:

Organism=Escherichia coli, GI87082101, Length=327, Percent_Identity=23.5474006116208, Blast_Score=80, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17550934, Length=278, Percent_Identity=24.1007194244604, Blast_Score=88, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI115533026, Length=93, Percent_Identity=34.4086021505376, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: NA

Molecular weight: Translated: 42925; Mature: 42925

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKWLIVFFIFAVFSGSVVALIHASKGKKYDIKAFSNLNNKQKHDMQEVDANEKKHYEV
CCHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEHHHHCCCCHHHHHHHHHCCCCHHHHHH
VAGKLDQYLKDKGFNGSVLVASKDHVILRKGYGYANMKDKVFTTPRTKYRIGSITKTVVA
HHHHHHHHHHCCCCCCEEEEEECCCEEEECCCCCCCCCCCEEECCCCCEEHHHHHHHHHH
ISIMQLKEKGKLNIEDNVNKYIPSFPADKNITLRNLLTHTSGLPDQGKGRVDAASRLKLV
HHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHEEEE
TWIGSQALQFPAGTGWKYTDYNYMVLAYIVEKITNKPLAEYVKENIFTPVEMHESGMGAT
EECCCHHEECCCCCCCEECCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHCCCCCCC
LPEDIFLAEGYTRKDNELIAAPRLKMNWLYGCGEMYTTVEDMKRLDEAIMNGKLLSKQSV
CCCCEEEECCCCCCCCCEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
LDMFTASPARKYGFSFYTYPDYYHNHGVLAGWNTFNNFNWDKKTFVILFSNVQNGMNDTF
HHHHHCCCHHHHCCEEEECCCHHCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCHHH
NQEFRKMANDLIEGNGA
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLKKWLIVFFIFAVFSGSVVALIHASKGKKYDIKAFSNLNNKQKHDMQEVDANEKKHYEV
CCHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEHHHHCCCCHHHHHHHHHCCCCHHHHHH
VAGKLDQYLKDKGFNGSVLVASKDHVILRKGYGYANMKDKVFTTPRTKYRIGSITKTVVA
HHHHHHHHHHCCCCCCEEEEEECCCEEEECCCCCCCCCCCEEECCCCCEEHHHHHHHHHH
ISIMQLKEKGKLNIEDNVNKYIPSFPADKNITLRNLLTHTSGLPDQGKGRVDAASRLKLV
HHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHEEEE
TWIGSQALQFPAGTGWKYTDYNYMVLAYIVEKITNKPLAEYVKENIFTPVEMHESGMGAT
EECCCHHEECCCCCCCEECCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHCCCCCCC
LPEDIFLAEGYTRKDNELIAAPRLKMNWLYGCGEMYTTVEDMKRLDEAIMNGKLLSKQSV
CCCCEEEECCCCCCCCCEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
LDMFTASPARKYGFSFYTYPDYYHNHGVLAGWNTFNNFNWDKKTFVILFSNVQNGMNDTF
HHHHHCCCHHHHCCEEEECCCHHCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCHHH
NQEFRKMANDLIEGNGA
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]