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The map label for this gene is yfiY [H]

Identifier: 30263431

GI number: 30263431

Start: 3239461

End: 3240240

Strand: Reverse

Name: yfiY [H]

Synonym: BA_3531

Alternate gene names: 30263431

Gene position: 3240240-3239461 (Counterclockwise)

Preceding gene: 30263432

Following gene: 30263430

Centisome position: 61.99

GC content: 35.64

Gene sequence:

>780_bases
ATGTCTATTCACTTAACGAATAATTTACTTGCATTAGGAATTACACCAGTAGGTTCTGTAATTGGTGGAGATTTAAAAGA
TTTCTTACCACACGCAAAAGAACAACTGAAAGATACGAAGAAACTGGGCGTTGTAACAGATCCGAATATGGAAGCGTTAC
TTCAGTTAAAGCCATCTGAAATTTATGTGGATGAAAAATACGCTGGAAAAGATGTAGCGAAATACGAAAAAATTGCAAAA
ACACATTCTTTCAATTTAGATGAGGGTACGTGGAGAGACCATTTAAAACAAGTTGGTAAACTTGTAAACCGTGAGAAAGA
AGCGGATACATATATTCAAGATTACGAAGAGCAATCAAAACGAGTAAAAAGTTTAATCGGTAAAGAGCTAGGTAATAACG
AAAAAGTAATGGCAATTCGCGTTACTGCAAAAGAATTACGAGTATTTAGCACGAAAAGACCGATGGGACCAATTTTGTTC
CAAGACTTAGGGTTACAACCTGCAAATGGTGTAGAGAAAATTGATGGAAACCGTCCTTTCGAAGTCATTTCACAAGAAGT
ATTACCTGATTTTGATGCAGATGCTATTTTCGTTGTTGTAAACAGAGACGATAAAGCAAAAGCTGCATTTAAGCAACTTC
AAGAAACACCAATTTGGAAAGACTTAAAAGCTGTTAAAGGCAAACACGTATACATTATCAATGACCAACCATGGCTTGAC
TATTCTGCTTTAGGTAACAAAATGGCAATGGATGAAGCGGAGAAAATGTTTACGAAATAA

Upstream 100 bases:

>100_bases
TTTTATTTAGCATCGTGTGTATTTTAGTATTAGCAGCATGTGGTCAAACGAAAGCTAATAAAGAGGAAACGAAAAAAGTA
ATGAGCCAAAAATCGCTTCT

Downstream 100 bases:

>100_bases
TAGAGTTTTGCTATTAGGAAAGGCCCTCTGAATTTGGAGGGCCTTTTTGTTATTGTTAGAATAAATAAAAAATTATACAA
TGAATTTAATTTAATGTAGA

Product: iron compound ABC transporter, iron compound-binding protein, putative

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MSIHLTNNLLALGITPVGSVIGGDLKDFLPHAKEQLKDTKKLGVVTDPNMEALLQLKPSEIYVDEKYAGKDVAKYEKIAK
THSFNLDEGTWRDHLKQVGKLVNREKEADTYIQDYEEQSKRVKSLIGKELGNNEKVMAIRVTAKELRVFSTKRPMGPILF
QDLGLQPANGVEKIDGNRPFEVISQEVLPDFDADAIFVVVNRDDKAKAAFKQLQETPIWKDLKAVKGKHVYIINDQPWLD
YSALGNKMAMDEAEKMFTK

Sequences:

>Translated_259_residues
MSIHLTNNLLALGITPVGSVIGGDLKDFLPHAKEQLKDTKKLGVVTDPNMEALLQLKPSEIYVDEKYAGKDVAKYEKIAK
THSFNLDEGTWRDHLKQVGKLVNREKEADTYIQDYEEQSKRVKSLIGKELGNNEKVMAIRVTAKELRVFSTKRPMGPILF
QDLGLQPANGVEKIDGNRPFEVISQEVLPDFDADAIFVVVNRDDKAKAAFKQLQETPIWKDLKAVKGKHVYIINDQPWLD
YSALGNKMAMDEAEKMFTK
>Mature_258_residues
SIHLTNNLLALGITPVGSVIGGDLKDFLPHAKEQLKDTKKLGVVTDPNMEALLQLKPSEIYVDEKYAGKDVAKYEKIAKT
HSFNLDEGTWRDHLKQVGKLVNREKEADTYIQDYEEQSKRVKSLIGKELGNNEKVMAIRVTAKELRVFSTKRPMGPILFQ
DLGLQPANGVEKIDGNRPFEVISQEVLPDFDADAIFVVVNRDDKAKAAFKQLQETPIWKDLKAVKGKHVYIINDQPWLDY
SALGNKMAMDEAEKMFTK

Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen. Binds the siderophores and delivers them to the surface of yfiZ/yfhA (Probable) [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable). Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 29256; Mature: 29125

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIHLTNNLLALGITPVGSVIGGDLKDFLPHAKEQLKDTKKLGVVTDPNMEALLQLKPSE
CEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEECCCHHHHEEECCCC
IYVDEKYAGKDVAKYEKIAKTHSFNLDEGTWRDHLKQVGKLVNREKEADTYIQDYEEQSK
EEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
RVKSLIGKELGNNEKVMAIRVTAKELRVFSTKRPMGPILFQDLGLQPANGVEKIDGNRPF
HHHHHHHHHCCCCCEEEEEEEEHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHCCCCCCH
EVISQEVLPDFDADAIFVVVNRDDKAKAAFKQLQETPIWKDLKAVKGKHVYIINDQPWLD
HHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCHHHHHHHCCCEEEEECCCCCCC
YSALGNKMAMDEAEKMFTK
HHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SIHLTNNLLALGITPVGSVIGGDLKDFLPHAKEQLKDTKKLGVVTDPNMEALLQLKPSE
EEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEECCCHHHHEEECCCC
IYVDEKYAGKDVAKYEKIAKTHSFNLDEGTWRDHLKQVGKLVNREKEADTYIQDYEEQSK
EEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
RVKSLIGKELGNNEKVMAIRVTAKELRVFSTKRPMGPILFQDLGLQPANGVEKIDGNRPF
HHHHHHHHHCCCCCEEEEEEEEHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHCCCCCCH
EVISQEVLPDFDADAIFVVVNRDDKAKAAFKQLQETPIWKDLKAVKGKHVYIINDQPWLD
HHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCHHHHHHHCCCEEEEECCCCCCC
YSALGNKMAMDEAEKMFTK
HHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]