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The map label for this gene is ycaK [C]

Identifier: 30263267

GI number: 30263267

Start: 3089980

End: 3090555

Strand: Reverse

Name: ycaK [C]

Synonym: BA_3358

Alternate gene names: 30263267

Gene position: 3090555-3089980 (Counterclockwise)

Preceding gene: 30263268

Following gene: 30263266

Centisome position: 59.12

GC content: 37.85

Gene sequence:

>576_bases
TTGAATGTACTAATTGTATACGCTCATCCTAGTCCTTCCAGTTTTAACGCGGCGATTTTAAAGCATGTACAAAAAGGATT
ACAAGAAACAAACCATTCGGTTACGGTACTTGATTTATATAAAGAACAATTTAATCCCGTCCTTGTATTTAATGAAGAGA
AGAAAAGGCGTGATTTAGTAAATGAAGAAGAAACAGCTCGGTACAGAGCATTAGTAGAAGAAGCGGATACTCTTCTCTTC
ATTTATCCAATATGGTGGTGGGGGATGCCAGCTATTTTAAAAGGATTTATTGATCGCATTTTCGTTGCTGGTTTTGCTTA
TAAATATGAAGGTGCCCTGCCGAAAGGGTTACTAAAAGGTAAGAAGGCATGGGGAATTAATACGTTAGACTCACCGTTAT
GGTACGTCGCACTACTATATCGATCAGCCGATTGGATTATAATGAAGAGAGGTGTTTTACGTTTTTGCGGCATTCGCGAT
ATAAAACGATCTGTTTTTCAATCTGTGAAAACGAGTAAACGAGAGAAGCGGGAAAAGTGGTTATTACAAATAGAAGAAAA
GGCTCGTACGTTATGA

Upstream 100 bases:

>100_bases
CCGTATTAAACCGTTTATTACAAAGCTCAAAAAACATACAAATTGTAGAGAAGATGTTAAAGAAGGGGAAACTTTAACTT
ATAGAGGGAGTTGTTATGTA

Downstream 100 bases:

>100_bases
ATGAAATGGAACGTATTATAAATTGTTGTCAGTATGATAATGAACTTTTTCGTACATATATTAATTGCTTAATTCAATTG
AAGAAATGTAGTGAAACGTT

Product: quinone family NAD(P)H dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MNVLIVYAHPSPSSFNAAILKHVQKGLQETNHSVTVLDLYKEQFNPVLVFNEEKKRRDLVNEEETARYRALVEEADTLLF
IYPIWWWGMPAILKGFIDRIFVAGFAYKYEGALPKGLLKGKKAWGINTLDSPLWYVALLYRSADWIIMKRGVLRFCGIRD
IKRSVFQSVKTSKREKREKWLLQIEEKARTL

Sequences:

>Translated_191_residues
MNVLIVYAHPSPSSFNAAILKHVQKGLQETNHSVTVLDLYKEQFNPVLVFNEEKKRRDLVNEEETARYRALVEEADTLLF
IYPIWWWGMPAILKGFIDRIFVAGFAYKYEGALPKGLLKGKKAWGINTLDSPLWYVALLYRSADWIIMKRGVLRFCGIRD
IKRSVFQSVKTSKREKREKWLLQIEEKARTL
>Mature_191_residues
MNVLIVYAHPSPSSFNAAILKHVQKGLQETNHSVTVLDLYKEQFNPVLVFNEEKKRRDLVNEEETARYRALVEEADTLLF
IYPIWWWGMPAILKGFIDRIFVAGFAYKYEGALPKGLLKGKKAWGINTLDSPLWYVALLYRSADWIIMKRGVLRFCGIRD
IKRSVFQSVKTSKREKREKWLLQIEEKARTL

Specific function: Unknown

COG id: COG2249

COG function: function code R; Putative NADPH-quinone reductase (modulator of drug activity B)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD(P)H dehydrogenase (quinone) family [H]

Homologues:

Organism=Homo sapiens, GI156564357, Length=212, Percent_Identity=28.7735849056604, Blast_Score=86, Evalue=1e-17,
Organism=Homo sapiens, GI4505415, Length=202, Percent_Identity=28.7128712871287, Blast_Score=75, Evalue=3e-14,
Organism=Escherichia coli, GI1787129, Length=114, Percent_Identity=36.8421052631579, Blast_Score=80, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003680 [H]

Pfam domain/function: PF02525 Flavodoxin_2 [H]

EC number: 1.6.99.- [C]

Molecular weight: Translated: 22335; Mature: 22335

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVLIVYAHPSPSSFNAAILKHVQKGLQETNHSVTVLDLYKEQFNPVLVFNEEKKRRDLV
CCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCEEEEECCCHHHHHCC
NEEETARYRALVEEADTLLFIYPIWWWGMPAILKGFIDRIFVAGFAYKYEGALPKGLLKG
CHHHHHHHHHHHHHCCCEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCC
KKAWGINTLDSPLWYVALLYRSADWIIMKRGVLRFCGIRDIKRSVFQSVKTSKREKREKW
CCCCCCCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
LLQIEEKARTL
HHHHHHHHCCC
>Mature Secondary Structure
MNVLIVYAHPSPSSFNAAILKHVQKGLQETNHSVTVLDLYKEQFNPVLVFNEEKKRRDLV
CCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCEEEEECCCHHHHHCC
NEEETARYRALVEEADTLLFIYPIWWWGMPAILKGFIDRIFVAGFAYKYEGALPKGLLKG
CHHHHHHHHHHHHHCCCEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCC
KKAWGINTLDSPLWYVALLYRSADWIIMKRGVLRFCGIRDIKRSVFQSVKTSKREKREKW
CCCCCCCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
LLQIEEKARTL
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]