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The map label for this gene is tsr [C]

Identifier: 30263207

GI number: 30263207

Start: 3027722

End: 3029674

Strand: Reverse

Name: tsr [C]

Synonym: BA_3291

Alternate gene names: 30263207

Gene position: 3029674-3027722 (Counterclockwise)

Preceding gene: 30263208

Following gene: 30263203

Centisome position: 57.96

GC content: 33.54

Gene sequence:

>1953_bases
ATGAAGCTTAAAACGAAGTTGTCTATGGCATTTATTGCAATATTAATTATACCAAGTCTTATCGTAGGAGTATCGTCTTA
TGATAAAGCAAAAACAGATCTTAATGAAACAATTCTACAAACTGCGAAAGATAATGTGAGTATTTTAAATAAGATAGTTG
ATGATGAATTAGAAAATAAACATGTAGATGTAACTCATTTTGCAAAGATACTTACACAAGGTGATTATAACGCTGACCAA
TTGCAAAATGTGCAAGGTAAATTTGATCAATATATACAGTTACATCCAGAGATAGAAACAATTTATACTACATCTAGTAA
TAATCAATTTATTCATGCGCCCGTTGGAAAAATACCTGAAGGATTTAACCCATTAGAAAGTAGTTGGTATAAGGATGCAG
TAAAAGCTAATGGAGAGATTATTGTTTCGTCTCCCTATAAATCAAAGGCTACAGGCAATATGGTAATAGCAATTGCAAAG
CAAAATGCTGATAAAAGTGGTGTCATTGGTGTGGACTTGAATATTAATGATATCGTAAAAACTTCTAAAATGATAAAAAT
AGGAAAACAAGGATTTGTATCTATAGTAAGTCAAGATAAGACTATAGTTGTTCATCCTACACTTAAGCCAGGTGAGAAAT
TAGAGAAATCATTAGCAGATGAACTATACAAGAAAGAAGATGGAGTAATTACTTATAGCCTTAATGGTGAGGATCGAAAC
ATAAGCTTTAAAACAAACAAAAAAACAGGTTGGAAAATAGCTGGTGTAATGCCTATTAAAGAAATTGAAGAAGCTACCAA
TCCTATTTTTTATAAAACGCTCACTATAATAGGGGCTTCATTGTTGTTAGGTGGAATTGTAATTTTCTTCATTCTTAAAT
CTATTATTAATCCATTAAGACAATTAGTTATTTCAGCTCAAAGAATTAGTCGTGGAGATTTAACTGAGAAAATAAATATT
CGTTCAAAGGATGAACTTGGTCAATTAGGTGGTAGTTTCAATACAATGGCAGAGTCTTTACGTAATATAATTTCTCAAAT
TAACACATCTGCAGGACATGTGGCTGCTTCATCTGAGGAACTAACCGCTAGCGTAGAGCAAGCCAGTGTTGCGACAGAAC
AAATTACAAAAGAAATGGAAGAAATATCGAATAGTGCAGAAGTTCAAAATAATGAAGTGGCGTCTGGAGCGAAATTAATT
GGTGAGGTAACACGAAACATTCAATGCGTAGCTGATAATGCTTCTGAAGTATCGGCTTCATCCTTATACACAAAACAAAA
AGCCAATGAGGGTGAACAATTAGTAGAACAAACTGTAACGCAAATGCAGTCAATCCATCATTCTGTTTCTCAATCTGATA
ATGTAATTAAATTATTAGATAAGAAATCGCAGCAAATCGGAAGTATATTAGAAGTAATTCAAAATATTGCAGCACAAACA
AATTTATTAGCATTGAATGCAGCGATTGAAGCGGCAAGGGCAGGAGAACAGGGGCGTGGCTTTGCAATTGTCGCCGATGA
AGTCAGGAAGTTAGCGGAGCAATCATCCGAATCTTCAATGGAAATTGGAAGTTTAATTAATGAAATACAAGCAGATGTAC
ATGAGACTGTAAAAGCTATGAATGAAGTAGGAGTTGAAGTGCAGTCAGGGATTCAGGTTGCGAATGATACAAAACAAAGT
TTTTATGAAATTTCAAAATCTGCAAATGATATCGTGTCAAAAGTACATGGTATGGTGGAATTATCAAATAAAATGACAAG
TGATGTAATGGAAGTTGATACATCAATTAATCAAATATCTATGGCTGTGAAAGAGAATTCTTCAAGTATGCAAACGATAG
CCGGTTCATCTGAAGAACAACATGCTTCTATGGAAGAGATAAATTCTTCAGCAATACAATTAGCACAGACGGCCGAAGAA
CTTCAAGAATTAATTGGTGGATTTAAGATATAA

Upstream 100 bases:

>100_bases
TAGAAAAAATAAAGGAGCAAACGATTAAATAAACTAAATCAGTTGTAAGAATGAAAGGGAGAAGTAGAGAGTGTTTAAAA
TAAAAGAAAGATTGGAACAA

Downstream 100 bases:

>100_bases
GTTCAGAATCTAGGATAGAATCCTAGATAGTGTGTTTAAGGATAGAAGTTAAAAATCTTATAATGATAAAAGGAGCAAAT
TAATTTGCTCCTTTTTCACT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 650; Mature: 650

Protein sequence:

>650_residues
MKLKTKLSMAFIAILIIPSLIVGVSSYDKAKTDLNETILQTAKDNVSILNKIVDDELENKHVDVTHFAKILTQGDYNADQ
LQNVQGKFDQYIQLHPEIETIYTTSSNNQFIHAPVGKIPEGFNPLESSWYKDAVKANGEIIVSSPYKSKATGNMVIAIAK
QNADKSGVIGVDLNINDIVKTSKMIKIGKQGFVSIVSQDKTIVVHPTLKPGEKLEKSLADELYKKEDGVITYSLNGEDRN
ISFKTNKKTGWKIAGVMPIKEIEEATNPIFYKTLTIIGASLLLGGIVIFFILKSIINPLRQLVISAQRISRGDLTEKINI
RSKDELGQLGGSFNTMAESLRNIISQINTSAGHVAASSEELTASVEQASVATEQITKEMEEISNSAEVQNNEVASGAKLI
GEVTRNIQCVADNASEVSASSLYTKQKANEGEQLVEQTVTQMQSIHHSVSQSDNVIKLLDKKSQQIGSILEVIQNIAAQT
NLLALNAAIEAARAGEQGRGFAIVADEVRKLAEQSSESSMEIGSLINEIQADVHETVKAMNEVGVEVQSGIQVANDTKQS
FYEISKSANDIVSKVHGMVELSNKMTSDVMEVDTSINQISMAVKENSSSMQTIAGSSEEQHASMEEINSSAIQLAQTAEE
LQELIGGFKI

Sequences:

>Translated_650_residues
MKLKTKLSMAFIAILIIPSLIVGVSSYDKAKTDLNETILQTAKDNVSILNKIVDDELENKHVDVTHFAKILTQGDYNADQ
LQNVQGKFDQYIQLHPEIETIYTTSSNNQFIHAPVGKIPEGFNPLESSWYKDAVKANGEIIVSSPYKSKATGNMVIAIAK
QNADKSGVIGVDLNINDIVKTSKMIKIGKQGFVSIVSQDKTIVVHPTLKPGEKLEKSLADELYKKEDGVITYSLNGEDRN
ISFKTNKKTGWKIAGVMPIKEIEEATNPIFYKTLTIIGASLLLGGIVIFFILKSIINPLRQLVISAQRISRGDLTEKINI
RSKDELGQLGGSFNTMAESLRNIISQINTSAGHVAASSEELTASVEQASVATEQITKEMEEISNSAEVQNNEVASGAKLI
GEVTRNIQCVADNASEVSASSLYTKQKANEGEQLVEQTVTQMQSIHHSVSQSDNVIKLLDKKSQQIGSILEVIQNIAAQT
NLLALNAAIEAARAGEQGRGFAIVADEVRKLAEQSSESSMEIGSLINEIQADVHETVKAMNEVGVEVQSGIQVANDTKQS
FYEISKSANDIVSKVHGMVELSNKMTSDVMEVDTSINQISMAVKENSSSMQTIAGSSEEQHASMEEINSSAIQLAQTAEE
LQELIGGFKI
>Mature_650_residues
MKLKTKLSMAFIAILIIPSLIVGVSSYDKAKTDLNETILQTAKDNVSILNKIVDDELENKHVDVTHFAKILTQGDYNADQ
LQNVQGKFDQYIQLHPEIETIYTTSSNNQFIHAPVGKIPEGFNPLESSWYKDAVKANGEIIVSSPYKSKATGNMVIAIAK
QNADKSGVIGVDLNINDIVKTSKMIKIGKQGFVSIVSQDKTIVVHPTLKPGEKLEKSLADELYKKEDGVITYSLNGEDRN
ISFKTNKKTGWKIAGVMPIKEIEEATNPIFYKTLTIIGASLLLGGIVIFFILKSIINPLRQLVISAQRISRGDLTEKINI
RSKDELGQLGGSFNTMAESLRNIISQINTSAGHVAASSEELTASVEQASVATEQITKEMEEISNSAEVQNNEVASGAKLI
GEVTRNIQCVADNASEVSASSLYTKQKANEGEQLVEQTVTQMQSIHHSVSQSDNVIKLLDKKSQQIGSILEVIQNIAAQT
NLLALNAAIEAARAGEQGRGFAIVADEVRKLAEQSSESSMEIGSLINEIQADVHETVKAMNEVGVEVQSGIQVANDTKQS
FYEISKSANDIVSKVHGMVELSNKMTSDVMEVDTSINQISMAVKENSSSMQTIAGSSEEQHASMEEINSSAIQLAQTAEE
LQELIGGFKI

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=273, Percent_Identity=34.0659340659341, Blast_Score=129, Evalue=8e-31,
Organism=Escherichia coli, GI1788195, Length=317, Percent_Identity=29.6529968454259, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1787690, Length=393, Percent_Identity=29.2620865139949, Blast_Score=118, Evalue=1e-27,
Organism=Escherichia coli, GI1788194, Length=371, Percent_Identity=29.1105121293801, Blast_Score=110, Evalue=3e-25,
Organism=Escherichia coli, GI1789453, Length=369, Percent_Identity=26.0162601626016, Blast_Score=97, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 70660; Mature: 70660

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKTKLSMAFIAILIIPSLIVGVSSYDKAKTDLNETILQTAKDNVSILNKIVDDELENK
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
HVDVTHFAKILTQGDYNADQLQNVQGKFDQYIQLHPEIETIYTTSSNNQFIHAPVGKIPE
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEECCCEEEEEEECCCCEEEECCCCCCCC
GFNPLESSWYKDAVKANGEIIVSSPYKSKATGNMVIAIAKQNADKSGVIGVDLNINDIVK
CCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEECCHHHHHH
TSKMIKIGKQGFVSIVSQDKTIVVHPTLKPGEKLEKSLADELYKKEDGVITYSLNGEDRN
HHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCE
ISFKTNKKTGWKIAGVMPIKEIEEATNPIFYKTLTIIGASLLLGGIVIFFILKSIINPLR
EEEEECCCCCEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLVISAQRISRGDLTEKINIRSKDELGQLGGSFNTMAESLRNIISQINTSAGHVAASSEE
HHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEECCCHH
LTASVEQASVATEQITKEMEEISNSAEVQNNEVASGAKLIGEVTRNIQCVADNASEVSAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEECCCHHHHHH
SLYTKQKANEGEQLVEQTVTQMQSIHHSVSQSDNVIKLLDKKSQQIGSILEVIQNIAAQT
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NLLALNAAIEAARAGEQGRGFAIVADEVRKLAEQSSESSMEIGSLINEIQADVHETVKAM
HHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
NEVGVEVQSGIQVANDTKQSFYEISKSANDIVSKVHGMVELSNKMTSDVMEVDTSINQIS
HHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAVKENSSSMQTIAGSSEEQHASMEEINSSAIQLAQTAEELQELIGGFKI
HHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKLKTKLSMAFIAILIIPSLIVGVSSYDKAKTDLNETILQTAKDNVSILNKIVDDELENK
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
HVDVTHFAKILTQGDYNADQLQNVQGKFDQYIQLHPEIETIYTTSSNNQFIHAPVGKIPE
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEECCCEEEEEEECCCCEEEECCCCCCCC
GFNPLESSWYKDAVKANGEIIVSSPYKSKATGNMVIAIAKQNADKSGVIGVDLNINDIVK
CCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEECCHHHHHH
TSKMIKIGKQGFVSIVSQDKTIVVHPTLKPGEKLEKSLADELYKKEDGVITYSLNGEDRN
HHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCE
ISFKTNKKTGWKIAGVMPIKEIEEATNPIFYKTLTIIGASLLLGGIVIFFILKSIINPLR
EEEEECCCCCEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLVISAQRISRGDLTEKINIRSKDELGQLGGSFNTMAESLRNIISQINTSAGHVAASSEE
HHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEECCCHH
LTASVEQASVATEQITKEMEEISNSAEVQNNEVASGAKLIGEVTRNIQCVADNASEVSAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEECCCHHHHHH
SLYTKQKANEGEQLVEQTVTQMQSIHHSVSQSDNVIKLLDKKSQQIGSILEVIQNIAAQT
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NLLALNAAIEAARAGEQGRGFAIVADEVRKLAEQSSESSMEIGSLINEIQADVHETVKAM
HHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
NEVGVEVQSGIQVANDTKQSFYEISKSANDIVSKVHGMVELSNKMTSDVMEVDTSINQIS
HHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAVKENSSSMQTIAGSSEEQHASMEEINSSAIQLAQTAEELQELIGGFKI
HHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA