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The map label for this gene is ytaB [H]

Identifier: 30263112

GI number: 30263112

Start: 2924863

End: 2925318

Strand: Reverse

Name: ytaB [H]

Synonym: BA_3179

Alternate gene names: 30263112

Gene position: 2925318-2924863 (Counterclockwise)

Preceding gene: 270000553

Following gene: 30263111

Centisome position: 55.96

GC content: 29.61

Gene sequence:

>456_bases
ATGAAAAATTCTAGTATCATAGTATTTTTACTAACATATGGTTTGTTTTATGTTTCTAGTATTTTATTTCCTATTGATCG
TATGTGGTACGATGCGCTAGAAAAGCCGTCTTGGACACCTTCTGGCATGACAATCGGAATGATTTGGGCTATATTATATG
GACTGATTGCATTATCAGTTACAATTATTTATAACAAATATGGATGTAAGCCAAAAACATTTTGGTTTGTATTCCTTTTA
AATTACATATGCAATCAAGCGTTTAGCTATTTTCAATTCAGTCAAAAAAAATTATTTTTAGCAACAGTAGATTGTTTACT
AGTCGCTATTACTACGTTGCTTCTCATAGCGGTTTCTTCCAAATTATCTAAAGTATCGACATGGTTGCTAATTCCATATT
TTTTATGGTCTACATTTGCTACATATTTATCTTGGACAATTTATAGTATAAATTAA

Upstream 100 bases:

>100_bases
AATATGTATTTAAAATTTAAATATTAGAATTTTATCCATTACAAGGACATACTAATCATATAAAGTTTCTAAAACCTTCT
ATTGAAAAAGGAGAATGTTT

Downstream 100 bases:

>100_bases
AGACGTAAATGAAAACTTGAGCACAATAAAAATGCTCGAGTTTTTATGTTTATTAATGGTAATCTAAAATATAGAATATA
TACATCTTAGGGAGGTCATC

Product: TspO/MBR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MKNSSIIVFLLTYGLFYVSSILFPIDRMWYDALEKPSWTPSGMTIGMIWAILYGLIALSVTIIYNKYGCKPKTFWFVFLL
NYICNQAFSYFQFSQKKLFLATVDCLLVAITTLLLIAVSSKLSKVSTWLLIPYFLWSTFATYLSWTIYSIN

Sequences:

>Translated_151_residues
MKNSSIIVFLLTYGLFYVSSILFPIDRMWYDALEKPSWTPSGMTIGMIWAILYGLIALSVTIIYNKYGCKPKTFWFVFLL
NYICNQAFSYFQFSQKKLFLATVDCLLVAITTLLLIAVSSKLSKVSTWLLIPYFLWSTFATYLSWTIYSIN
>Mature_151_residues
MKNSSIIVFLLTYGLFYVSSILFPIDRMWYDALEKPSWTPSGMTIGMIWAILYGLIALSVTIIYNKYGCKPKTFWFVFLL
NYICNQAFSYFQFSQKKLFLATVDCLLVAITTLLLIAVSSKLSKVSTWLLIPYFLWSTFATYLSWTIYSIN

Specific function: Unknown

COG id: COG3476

COG function: function code T; Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TspO/BZRP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004307 [H]

Pfam domain/function: PF03073 TspO_MBR [H]

EC number: NA

Molecular weight: Translated: 17495; Mature: 17495

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNSSIIVFLLTYGLFYVSSILFPIDRMWYDALEKPSWTPSGMTIGMIWAILYGLIALSV
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
TIIYNKYGCKPKTFWFVFLLNYICNQAFSYFQFSQKKLFLATVDCLLVAITTLLLIAVSS
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLSKVSTWLLIPYFLWSTFATYLSWTIYSIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure
MKNSSIIVFLLTYGLFYVSSILFPIDRMWYDALEKPSWTPSGMTIGMIWAILYGLIALSV
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
TIIYNKYGCKPKTFWFVFLLNYICNQAFSYFQFSQKKLFLATVDCLLVAITTLLLIAVSS
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLSKVSTWLLIPYFLWSTFATYLSWTIYSIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]