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The map label for this gene is ybgL [C]

Identifier: 30263045

GI number: 30263045

Start: 2848732

End: 2849493

Strand: Reverse

Name: ybgL [C]

Synonym: BA_3095

Alternate gene names: 30263045

Gene position: 2849493-2848732 (Counterclockwise)

Preceding gene: 30263046

Following gene: 30263044

Centisome position: 54.51

GC content: 38.58

Gene sequence:

>762_bases
ATGACTACAATTGATTTGAATTGTAATTTAGGAGAAAGTTTTGGCGCTTATAAAATGGGGAATGATGATGAAATTCTTCC
GTTCGTTTCCTCTATAAACGTTGCATGTGGTTTTCATGCGGGTGATCCGTCCGTTATGCGGCAAACGGTTGAAAAGGCAA
TGCAGCATAATGTAGCGATAGGGGCACACCCAGGATTTCCTGATTTAATTGGATTTGGTAGAAGAAACATGAACGTTTCA
GCAAATGAAGTATACGATTATGTTTTATATCAAATTGGTGCATTAGACGCTTTTGTAAAAGCAGCTGGTGGGAAGATGCA
GCATGTGAAACCGCACGGAGCCCTATATAATATGGCGGCAACTAATCCGGAAATTGCAGATGCAATCGCAAAGGCAATTT
ATCATATGAATTCAAGTCTATCACTTTACGGATTAGCAAATAGCGAGGCGTTTATACAGGCTGCGGAAAAATACAATATA
ACTCTCGTACAAGAAGCTTTTGCAGATCGTACGTATAAGGAAGATGGAACCTTAACGAGTCGTACGGAAGAAAATGCGCT
TATAAAAAATGAAGATGAAGCGATAAAACAAGTGCTTCAAATGGTGAAAGAAGGCTATGTAAATTCGGTGAATGGTGAGA
AAGTAGCAGTTCAGGCGCAGACAATCTGTTTACATGGTGATGGAGAAAAAGCAGTACAATTTGCGAGAAAAATATACAGA
ACATTCGAACATAATAAAATTTCTATATGTGCACCGAAATAA

Upstream 100 bases:

>100_bases
CGCTTGAAGAAGCGGAACAATTGTACATAGAAAAAGAAGTAAATAGAATCTATTAAAAAAGTTCATCGCTTTACGAAGCT
GAGTGCAGGAGGGAAATATC

Downstream 100 bases:

>100_bases
AAAAATGAGGGGAAGTGTTGGAATTGGTGAAATTAATCGGGATATTACTAGTTGCAGTGGGCTTTTTATTTAGATTAAAT
ACACTATTAGTCGTTATGGT

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MTTIDLNCNLGESFGAYKMGNDDEILPFVSSINVACGFHAGDPSVMRQTVEKAMQHNVAIGAHPGFPDLIGFGRRNMNVS
ANEVYDYVLYQIGALDAFVKAAGGKMQHVKPHGALYNMAATNPEIADAIAKAIYHMNSSLSLYGLANSEAFIQAAEKYNI
TLVQEAFADRTYKEDGTLTSRTEENALIKNEDEAIKQVLQMVKEGYVNSVNGEKVAVQAQTICLHGDGEKAVQFARKIYR
TFEHNKISICAPK

Sequences:

>Translated_253_residues
MTTIDLNCNLGESFGAYKMGNDDEILPFVSSINVACGFHAGDPSVMRQTVEKAMQHNVAIGAHPGFPDLIGFGRRNMNVS
ANEVYDYVLYQIGALDAFVKAAGGKMQHVKPHGALYNMAATNPEIADAIAKAIYHMNSSLSLYGLANSEAFIQAAEKYNI
TLVQEAFADRTYKEDGTLTSRTEENALIKNEDEAIKQVLQMVKEGYVNSVNGEKVAVQAQTICLHGDGEKAVQFARKIYR
TFEHNKISICAPK
>Mature_252_residues
TTIDLNCNLGESFGAYKMGNDDEILPFVSSINVACGFHAGDPSVMRQTVEKAMQHNVAIGAHPGFPDLIGFGRRNMNVSA
NEVYDYVLYQIGALDAFVKAAGGKMQHVKPHGALYNMAATNPEIADAIAKAIYHMNSSLSLYGLANSEAFIQAAEKYNIT
LVQEAFADRTYKEDGTLTSRTEENALIKNEDEAIKQVLQMVKEGYVNSVNGEKVAVQAQTICLHGDGEKAVQFARKIYRT
FEHNKISICAPK

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=248, Percent_Identity=50, Blast_Score=254, Evalue=5e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 27689; Mature: 27557

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTIDLNCNLGESFGAYKMGNDDEILPFVSSINVACGFHAGDPSVMRQTVEKAMQHNVAI
CEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHCCEEE
GAHPGFPDLIGFGRRNMNVSANEVYDYVLYQIGALDAFVKAAGGKMQHVKPHGALYNMAA
ECCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEECC
TNPEIADAIAKAIYHMNSSLSLYGLANSEAFIQAAEKYNITLVQEAFADRTYKEDGTLTS
CCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCEEEEHHHHHCCCCCCCCCCCC
RTEENALIKNEDEAIKQVLQMVKEGYVNSVNGEKVAVQAQTICLHGDGEKAVQFARKIYR
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHH
TFEHNKISICAPK
HHCCCEEEEECCC
>Mature Secondary Structure 
TTIDLNCNLGESFGAYKMGNDDEILPFVSSINVACGFHAGDPSVMRQTVEKAMQHNVAI
EEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHCCEEE
GAHPGFPDLIGFGRRNMNVSANEVYDYVLYQIGALDAFVKAAGGKMQHVKPHGALYNMAA
ECCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEECC
TNPEIADAIAKAIYHMNSSLSLYGLANSEAFIQAAEKYNITLVQEAFADRTYKEDGTLTS
CCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCEEEEHHHHHCCCCCCCCCCCC
RTEENALIKNEDEAIKQVLQMVKEGYVNSVNGEKVAVQAQTICLHGDGEKAVQFARKIYR
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHH
TFEHNKISICAPK
HHCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA