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The map label for this gene is ycdQ [C]

Identifier: 30262978

GI number: 30262978

Start: 2787510

End: 2788982

Strand: Reverse

Name: ycdQ [C]

Synonym: BA_3024

Alternate gene names: 30262978

Gene position: 2788982-2787510 (Counterclockwise)

Preceding gene: 30262979

Following gene: 30262977

Centisome position: 53.35

GC content: 33.13

Gene sequence:

>1473_bases
TTGAATCAGATTTTAAATAAATTGCAGCATATAAAACCAATAGAAATTATTATTGTAGCTGATGATAGAATGAGTGCTAT
ACAATCTATACCAACATTTGTTGAATGTAACGTTGTTGTGATTGAAGAGAAAAATAAATGGAAAGCACCAGTTCATGGGG
CGAAAGTTGCCAATGGGGATGTAGTTTTATTTTTAGATGGAGAAGATGTTATTTTTTCGGTAGAATTAGAACGATTTATA
GAACCGCTACTAAAAAAGGAACAGGATGTAATTTTGAATAACATAGACTCCGTATGTTTTGAAAAGATGAGAGTAGAATG
GCCAAGCATTGCAATGGTGTATAGAAAAATAGTAAACGATGTATTGGGGCGTATGGATTTAAAATATGATTCGATGTTAT
CTATGCCATATGCTATTACTAAAAAAGCGATTAAAGACATTGGATATGATATCTTGCAGAACCCTATTCTATCCCAAGTA
ACTCTTATTGAGAAAGGATGGCCACTACATTCCTCGTCAGCCATCACTAACACTTCTTTAAATAATATAACCTCAAACAA
CACCTCTTTCTATAAAAATGAATTAACTAAATTAGAAGTATGTGAGATTAAAGAGAATGTAAAAGCTTTGGAAAGTTGGT
TACAACGAAAAGATGATAGAGGGAACTATACAGATGGAGGAAGAAAAAGAGAAGTTATAGAGCAACTAAAAAAACAGAAG
AATTATTCACTTTTTCATAAAGGATGGGGAATGAATTCCTCTATTTATAATGGAAAACAGTTATCAATTATTATACCAGC
GCAAAATGAAGAAGCAACAATTAAAGAAGTTATTCTTGAGGCAAGAAAAATTGAACCGAAAGAAATAATTGTTGTAATTA
ATGGATCAACAGATCAAACAGAAGCAATTGCTAAGCAATTAGGAGCTACAGTAATTGTTTATGAAGAAGCATTAGGGCAT
GATGTAGGACGTGCTATTGGTGCACAAGAAGCCACAGGAGATATACTTCTCTTTATTGATGCTGACTTTGCTATTCCAGC
AAAAGATCTTCATCCATTAACGAAGGCTGTTGTGGATGGGGTTGATATAGCTTTAAACGATTTAAATTTAAATCTGAGAT
TTCCTCTATATATTGTAAATTTATATAAATATATGTTGAATATTGCTTGTAATCGTAAAGATTTAGGAGTGGGATCCACA
ATTGCTGTTCCTCATGCTATTAGTAGAAAATGTTTAGAGGGAATCGGCTGGGATACACTTCACACATCTTGTGTTGCGCA
AGTAAAGGCAATATTAGAAGGATATAAAGTCGAATGTGTCCATTTTGTAGATGTAATGAAACCAAATCGTATTCGGCCAC
AAGAGCATTTTGCCACGATAGGACATCCACCAGCTGTACTGAGAATTACTGGGGATCATTTAGAAGGACTTTCATATTTA
TTGAAGCATAGGGATTTTAAAGATTTATTTTAA

Upstream 100 bases:

>100_bases
TTGAATATATAAAAAAGTAAAGCCTAATCAGACTGTGGAAGAAGAACAAAAAGAAGCAGAGCTATCAGTTGTTATAGTTT
TAGGAGAAGAAAAATCGAAG

Downstream 100 bases:

>100_bases
AAGGTAAATTTGTCTATTGATTGAGTAATATAAACATTTCATTTAAGCAACTTGACGATATTTAGTATTGCGATGAAACT
AAATCAAAAGTTTTTATTAT

Product: glycosyl transferase, group 2 family protein

Products: NA

Alternate protein names: Glycosyl Transferase Family Protein; Glycosyltransferase Involved In Cell Wall Biogenesis; Glycosyltransferase/Glycosyltransferase; Glycosyltransferase; Cell Wall Biosynthesis Glycosyltransferase; Family 2 Glycosyl Transferase; Glycosyl Transferase Domain-Containing Protein

Number of amino acids: Translated: 490; Mature: 490

Protein sequence:

>490_residues
MNQILNKLQHIKPIEIIIVADDRMSAIQSIPTFVECNVVVIEEKNKWKAPVHGAKVANGDVVLFLDGEDVIFSVELERFI
EPLLKKEQDVILNNIDSVCFEKMRVEWPSIAMVYRKIVNDVLGRMDLKYDSMLSMPYAITKKAIKDIGYDILQNPILSQV
TLIEKGWPLHSSSAITNTSLNNITSNNTSFYKNELTKLEVCEIKENVKALESWLQRKDDRGNYTDGGRKREVIEQLKKQK
NYSLFHKGWGMNSSIYNGKQLSIIIPAQNEEATIKEVILEARKIEPKEIIVVINGSTDQTEAIAKQLGATVIVYEEALGH
DVGRAIGAQEATGDILLFIDADFAIPAKDLHPLTKAVVDGVDIALNDLNLNLRFPLYIVNLYKYMLNIACNRKDLGVGST
IAVPHAISRKCLEGIGWDTLHTSCVAQVKAILEGYKVECVHFVDVMKPNRIRPQEHFATIGHPPAVLRITGDHLEGLSYL
LKHRDFKDLF

Sequences:

>Translated_490_residues
MNQILNKLQHIKPIEIIIVADDRMSAIQSIPTFVECNVVVIEEKNKWKAPVHGAKVANGDVVLFLDGEDVIFSVELERFI
EPLLKKEQDVILNNIDSVCFEKMRVEWPSIAMVYRKIVNDVLGRMDLKYDSMLSMPYAITKKAIKDIGYDILQNPILSQV
TLIEKGWPLHSSSAITNTSLNNITSNNTSFYKNELTKLEVCEIKENVKALESWLQRKDDRGNYTDGGRKREVIEQLKKQK
NYSLFHKGWGMNSSIYNGKQLSIIIPAQNEEATIKEVILEARKIEPKEIIVVINGSTDQTEAIAKQLGATVIVYEEALGH
DVGRAIGAQEATGDILLFIDADFAIPAKDLHPLTKAVVDGVDIALNDLNLNLRFPLYIVNLYKYMLNIACNRKDLGVGST
IAVPHAISRKCLEGIGWDTLHTSCVAQVKAILEGYKVECVHFVDVMKPNRIRPQEHFATIGHPPAVLRITGDHLEGLSYL
LKHRDFKDLF
>Mature_490_residues
MNQILNKLQHIKPIEIIIVADDRMSAIQSIPTFVECNVVVIEEKNKWKAPVHGAKVANGDVVLFLDGEDVIFSVELERFI
EPLLKKEQDVILNNIDSVCFEKMRVEWPSIAMVYRKIVNDVLGRMDLKYDSMLSMPYAITKKAIKDIGYDILQNPILSQV
TLIEKGWPLHSSSAITNTSLNNITSNNTSFYKNELTKLEVCEIKENVKALESWLQRKDDRGNYTDGGRKREVIEQLKKQK
NYSLFHKGWGMNSSIYNGKQLSIIIPAQNEEATIKEVILEARKIEPKEIIVVINGSTDQTEAIAKQLGATVIVYEEALGH
DVGRAIGAQEATGDILLFIDADFAIPAKDLHPLTKAVVDGVDIALNDLNLNLRFPLYIVNLYKYMLNIACNRKDLGVGST
IAVPHAISRKCLEGIGWDTLHTSCVAQVKAILEGYKVECVHFVDVMKPNRIRPQEHFATIGHPPAVLRITGDHLEGLSYL
LKHRDFKDLF

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55168; Mature: 55168

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQILNKLQHIKPIEIIIVADDRMSAIQSIPTFVECNVVVIEEKNKWKAPVHGAKVANGD
CHHHHHHHHCCCCEEEEEEECCHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCEECCCC
VVLFLDGEDVIFSVELERFIEPLLKKEQDVILNNIDSVCFEKMRVEWPSIAMVYRKIVND
EEEEECCCCEEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
VLGRMDLKYDSMLSMPYAITKKAIKDIGYDILQNPILSQVTLIEKGWPLHSSSAITNTSL
HHHHCCCCHHHHHCCCHHHHHHHHHHHCHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCC
NNITSNNTSFYKNELTKLEVCEIKENVKALESWLQRKDDRGNYTDGGRKREVIEQLKKQK
CCCCCCCCHHHHHCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCC
NYSLFHKGWGMNSSIYNGKQLSIIIPAQNEEATIKEVILEARKIEPKEIIVVINGSTDQT
CCEEEECCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCHH
EAIAKQLGATVIVYEEALGHDVGRAIGAQEATGDILLFIDADFAIPAKDLHPLTKAVVDG
HHHHHHHCCEEEEEEHHHCCHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCC
VDIALNDLNLNLRFPLYIVNLYKYMLNIACNRKDLGVGSTIAVPHAISRKCLEGIGWDTL
CEEEEEECEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHH
HTSCVAQVKAILEGYKVECVHFVDVMKPNRIRPQEHFATIGHPPAVLRITGDHLEGLSYL
HHHHHHHHHHHHCCCCEEEEEEEHHCCCCCCCCHHHHHCCCCCCEEEEEECCHHHHHHHH
LKHRDFKDLF
HHCCCHHHCC
>Mature Secondary Structure
MNQILNKLQHIKPIEIIIVADDRMSAIQSIPTFVECNVVVIEEKNKWKAPVHGAKVANGD
CHHHHHHHHCCCCEEEEEEECCHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCEECCCC
VVLFLDGEDVIFSVELERFIEPLLKKEQDVILNNIDSVCFEKMRVEWPSIAMVYRKIVND
EEEEECCCCEEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
VLGRMDLKYDSMLSMPYAITKKAIKDIGYDILQNPILSQVTLIEKGWPLHSSSAITNTSL
HHHHCCCCHHHHHCCCHHHHHHHHHHHCHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCC
NNITSNNTSFYKNELTKLEVCEIKENVKALESWLQRKDDRGNYTDGGRKREVIEQLKKQK
CCCCCCCCHHHHHCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCC
NYSLFHKGWGMNSSIYNGKQLSIIIPAQNEEATIKEVILEARKIEPKEIIVVINGSTDQT
CCEEEECCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCHH
EAIAKQLGATVIVYEEALGHDVGRAIGAQEATGDILLFIDADFAIPAKDLHPLTKAVVDG
HHHHHHHCCEEEEEEHHHCCHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCC
VDIALNDLNLNLRFPLYIVNLYKYMLNIACNRKDLGVGSTIAVPHAISRKCLEGIGWDTL
CEEEEEECEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHH
HTSCVAQVKAILEGYKVECVHFVDVMKPNRIRPQEHFATIGHPPAVLRITGDHLEGLSYL
HHHHHHHHHHHHCCCCEEEEEEEHHCCCCCCCCHHHHHCCCCCCEEEEEECCHHHHHHHH
LKHRDFKDLF
HHCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA