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The map label for this gene is yddQ [H]

Identifier: 30262920

GI number: 30262920

Start: 2733434

End: 2733964

Strand: Reverse

Name: yddQ [H]

Synonym: BA_2963

Alternate gene names: 30262920

Gene position: 2733964-2733434 (Counterclockwise)

Preceding gene: 30262921

Following gene: 30262918

Centisome position: 52.3

GC content: 40.11

Gene sequence:

>531_bases
ATGAAAAAAGCATTATTAGTAATTGATGTGCAAGCAGGTATGTATACAGCAGGAATGCCAGTACATAATGGGGAAAAGTT
TTTAGAGACATTACAAGAGCTTATTGGGGAATGCCGTTCAAATGATATTCCGGTAATTTATGTGCAACATAACGGACCGA
AAGACCATCCGTTAGAAAAAGGTACAGACGGGTGGAAGATCCATGCGGCAATCGCTCCACTAGAAGGGGAGTGTGTGGTT
GAAAAAACGACTCCAGATTCATTCCACAAGACGAACCTAAAAGAAGTATTGCAAGACAAGGGAATCGATCATGTTATCAT
TTCAGGAATGCAGACGCAGTACTGTGTGGATACGACAACGCGCAGAGCATGTAGTGAAGGATATAAAATAACGTTAGTGA
GTGATGCACATAGTACATTTGATACAGAAGTATTACGTGCTGAAGACATTGTGAAGCATCATAACGTAGTGTTTGGAGCG
TTTGCTGATGTTGTTACGTTAAAAGATTTGAAAGTGACTGCCTCTAAATAA

Upstream 100 bases:

>100_bases
GGATTTAAAAAGGTGAAGATTTTAAAGGAACATGAACTGCATGAAGGGGTATTAGAAGATTGTTGGATGATGGAATATAA
ATAAAAGGGAGCTGCGCGAT

Downstream 100 bases:

>100_bases
GAGGCAGTTTTTTATTTAGAAGAAATGGCGTCAAATAATGTCGGTAAGTCGATACATTGAAAAATCGTCAATATAATTTC
ACGTACCATAATAAAAACAC

Product: isochorismatase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MKKALLVIDVQAGMYTAGMPVHNGEKFLETLQELIGECRSNDIPVIYVQHNGPKDHPLEKGTDGWKIHAAIAPLEGECVV
EKTTPDSFHKTNLKEVLQDKGIDHVIISGMQTQYCVDTTTRRACSEGYKITLVSDAHSTFDTEVLRAEDIVKHHNVVFGA
FADVVTLKDLKVTASK

Sequences:

>Translated_176_residues
MKKALLVIDVQAGMYTAGMPVHNGEKFLETLQELIGECRSNDIPVIYVQHNGPKDHPLEKGTDGWKIHAAIAPLEGECVV
EKTTPDSFHKTNLKEVLQDKGIDHVIISGMQTQYCVDTTTRRACSEGYKITLVSDAHSTFDTEVLRAEDIVKHHNVVFGA
FADVVTLKDLKVTASK
>Mature_176_residues
MKKALLVIDVQAGMYTAGMPVHNGEKFLETLQELIGECRSNDIPVIYVQHNGPKDHPLEKGTDGWKIHAAIAPLEGECVV
EKTTPDSFHKTNLKEVLQDKGIDHVIISGMQTQYCVDTTTRRACSEGYKITLVSDAHSTFDTEVLRAEDIVKHHNVVFGA
FADVVTLKDLKVTASK

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 19443; Mature: 19443

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKALLVIDVQAGMYTAGMPVHNGEKFLETLQELIGECRSNDIPVIYVQHNGPKDHPLEK
CCCEEEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC
GTDGWKIHAAIAPLEGECVVEKTTPDSFHKTNLKEVLQDKGIDHVIISGMQTQYCVDTTT
CCCCEEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCCEEEECHHH
RRACSEGYKITLVSDAHSTFDTEVLRAEDIVKHHNVVFGAFADVVTLKDLKVTASK
HHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEHHHHHEEEECEEEEECC
>Mature Secondary Structure
MKKALLVIDVQAGMYTAGMPVHNGEKFLETLQELIGECRSNDIPVIYVQHNGPKDHPLEK
CCCEEEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC
GTDGWKIHAAIAPLEGECVVEKTTPDSFHKTNLKEVLQDKGIDHVIISGMQTQYCVDTTT
CCCCEEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCCEEEECHHH
RRACSEGYKITLVSDAHSTFDTEVLRAEDIVKHHNVVFGAFADVVTLKDLKVTASK
HHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEHHHHHEEEECEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]