Click here to switch to the map view.

The map label for this gene is acrR [C]

Identifier: 30262406

GI number: 30262406

Start: 2243533

End: 2244162

Strand: Reverse

Name: acrR [C]

Synonym: BA_2406

Alternate gene names: 30262406

Gene position: 2244162-2243533 (Counterclockwise)

Preceding gene: 30262408

Following gene: 30262403

Centisome position: 42.93

GC content: 31.43

Gene sequence:

>630_bases
ATGGATTTGGAACAAAAACAACGTCCTCTCGGAAGGCCTCGCCAAAATAAAAATACAAAATCTACAAAAGAAACTATTTT
AGAAGTTGCAACACGATTATTTCTTACTCAAAATTATCAAGTCGTTTCCATGGATGAAGTAGCAAAAGTTTGTGGTGTTA
CGAAAGCAACCGTCTACTATTACTTTTCAACAAAAGCCGATTTATTTACCGCTACTATGATTCAAATGATGATACGTATA
CGTGAGAATATGTCGCAAATACTCTCTACAAACAATACTTTAGAAGAGAGATTATTAAACTTTGCTAAAGTTTACTTACA
TGCCACAATGGATATCGATATGAAAAATTTTATGAAAGATGCAAAACTATCTTTATCTGAAGAACAATTAAAGGAATTAA
AAAAAGCTGAAGATAGCATGTATGAAGTGTTAGAAAAAGCACTCGATAAAGCGATGCAACTTGGAGAAATCCAAAAAGGA
AACCCTAAATTTGCCGCTCATGCATTCGTATCTTTATTATCAATTGGGAATTTTAAAGATGAAAATGACAATCCTATTAT
TATAAGTATAGATGAATTAGCACAAGAAATCGTTTCTTTTTATTGGAACGGATTAGGTCATTCATATTAA

Upstream 100 bases:

>100_bases
TTTTTCCCTCCAGTATTAATTATATATACTGGTCGGTTAATTAATCAAGAATGATTAAAAATTATGTTATAATTATTTCA
AGAATACATGTCAGGAGCGA

Downstream 100 bases:

>100_bases
ACAGATTTCCTTTAATAAAAAAGCATGTTTGAATTTTTTTCAAACATGTTTTTTTATAATTTAGCATCCATTATCAAAAA
ATTATTATCTTCGACTTTTA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MDLEQKQRPLGRPRQNKNTKSTKETILEVATRLFLTQNYQVVSMDEVAKVCGVTKATVYYYFSTKADLFTATMIQMMIRI
RENMSQILSTNNTLEERLLNFAKVYLHATMDIDMKNFMKDAKLSLSEEQLKELKKAEDSMYEVLEKALDKAMQLGEIQKG
NPKFAAHAFVSLLSIGNFKDENDNPIIISIDELAQEIVSFYWNGLGHSY

Sequences:

>Translated_209_residues
MDLEQKQRPLGRPRQNKNTKSTKETILEVATRLFLTQNYQVVSMDEVAKVCGVTKATVYYYFSTKADLFTATMIQMMIRI
RENMSQILSTNNTLEERLLNFAKVYLHATMDIDMKNFMKDAKLSLSEEQLKELKKAEDSMYEVLEKALDKAMQLGEIQKG
NPKFAAHAFVSLLSIGNFKDENDNPIIISIDELAQEIVSFYWNGLGHSY
>Mature_209_residues
MDLEQKQRPLGRPRQNKNTKSTKETILEVATRLFLTQNYQVVSMDEVAKVCGVTKATVYYYFSTKADLFTATMIQMMIRI
RENMSQILSTNNTLEERLLNFAKVYLHATMDIDMKNFMKDAKLSLSEEQLKELKKAEDSMYEVLEKALDKAMQLGEIQKG
NPKFAAHAFVSLLSIGNFKDENDNPIIISIDELAQEIVSFYWNGLGHSY

Specific function: Potential Regulator Protein For The Acrab Genes. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24026; Mature: 24026

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLEQKQRPLGRPRQNKNTKSTKETILEVATRLFLTQNYQVVSMDEVAKVCGVTKATVYY
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHCCHHHHEEE
YFSTKADLFTATMIQMMIRIRENMSQILSTNNTLEERLLNFAKVYLHATMDIDMKNFMKD
EECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
AKLSLSEEQLKELKKAEDSMYEVLEKALDKAMQLGEIQKGNPKFAAHAFVSLLSIGNFKD
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCC
ENDNPIIISIDELAQEIVSFYWNGLGHSY
CCCCCEEEEHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDLEQKQRPLGRPRQNKNTKSTKETILEVATRLFLTQNYQVVSMDEVAKVCGVTKATVYY
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHCCHHHHEEE
YFSTKADLFTATMIQMMIRIRENMSQILSTNNTLEERLLNFAKVYLHATMDIDMKNFMKD
EECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
AKLSLSEEQLKELKKAEDSMYEVLEKALDKAMQLGEIQKGNPKFAAHAFVSLLSIGNFKD
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCC
ENDNPIIISIDELAQEIVSFYWNGLGHSY
CCCCCEEEEHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA