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The map label for this gene is 30261554

Identifier: 30261554

GI number: 30261554

Start: 1395447

End: 1396352

Strand: Reverse

Name: 30261554

Synonym: BA_1477

Alternate gene names: NA

Gene position: 1396352-1395447 (Counterclockwise)

Preceding gene: 30261556

Following gene: 30261553

Centisome position: 26.71

GC content: 36.42

Gene sequence:

>906_bases
ATGAACAATAAAAATAAAGGAAAAGTATTTTATGGTAATGATTGTTGCGAAGTAAGAGCTTGTAGTCATATTAACATCTC
TAAGTCCGAACTTACAGAATTCGTTAGACTTCTTCAAGCTCTTGGCCAAGCTATTCAAGCTGTCTTTCAGAACCCTTCTC
AAACTAATATCAATAACTTGATAGCTGCGCTCAATAACTTACAAAAGTTCCTCAATTGCTTAGATTTATCCCCAGCACAA
AAACAAATTGGAAATTCTATCATTGCTAATTTATTAACTATTTTAAGAACAACACCTTTCTCATGCGGAGCATTATACGT
TGAGCTACAAAGCTTGCTTAATTATTTATTGTATATCGCTAAGTTATTCAAAGTAGATTGTTGTACGATTGACAAACTAG
TTAGACTCATAACAGAGATCCAAACTATTCTAGTTCAATACGGATCAGGTTGCCTTGGAGGCGGAGGCGCTACTGGTGCG
CAAGGTGCTCAAGGACCAGCGGGTACACCAATTCCTGTAACGATTGCGGCAATCGGAAACTCCAATGCTCAAACAATATC
CCCTGGAACAAACATCCAATTTAATCAAGTTTTCGAAATAAATAACATTAATTTTAATGACACTGCAGATACTTTAACAA
TTTTAGAAACAGGCGTATATGATATTAGTTTCTCAGCGTCTACAACTTTCCCAGGATCTTCACCATTTGGATTCGGTATT
TCATTCAATGGTCAACCACCTACTCGTAATTTCTCAACTAACGTTATCGGTAGTGCTGTATCGTTCTCTACAATCGTTAC
TTTAGAAGCTGGTACAACAATTTCTGTACAACCTACAGCAAACACTATTTCTATTCCTAACACAGGCGATACAACAGCAA
CACTATCTGTATTCCGAATTTACTAA

Upstream 100 bases:

>100_bases
TTTTTTTAGAAATGGTAGTTTGTCCATTACGAATTCAGTATAAATTTCATTTTAATATATAGTAATGACTATTGATTCTA
TGAAAGAAAGGAATGAAAAG

Downstream 100 bases:

>100_bases
TTTTCGCTTAAAAAGTATATTTATAATAATATGTATCGTTTAACCGTGCATTAAATCTCTCTTTATATAGAAAGGAGCAC
TTATTTGGGAGGATAAGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: Collagen Triple Helix Repeat Protein; Group-Specific Protein; Collagen Triple Helix Repeat Domain-Containing Protein; Collagen-Like Protein

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MNNKNKGKVFYGNDCCEVRACSHINISKSELTEFVRLLQALGQAIQAVFQNPSQTNINNLIAALNNLQKFLNCLDLSPAQ
KQIGNSIIANLLTILRTTPFSCGALYVELQSLLNYLLYIAKLFKVDCCTIDKLVRLITEIQTILVQYGSGCLGGGGATGA
QGAQGPAGTPIPVTIAAIGNSNAQTISPGTNIQFNQVFEINNINFNDTADTLTILETGVYDISFSASTTFPGSSPFGFGI
SFNGQPPTRNFSTNVIGSAVSFSTIVTLEAGTTISVQPTANTISIPNTGDTTATLSVFRIY

Sequences:

>Translated_301_residues
MNNKNKGKVFYGNDCCEVRACSHINISKSELTEFVRLLQALGQAIQAVFQNPSQTNINNLIAALNNLQKFLNCLDLSPAQ
KQIGNSIIANLLTILRTTPFSCGALYVELQSLLNYLLYIAKLFKVDCCTIDKLVRLITEIQTILVQYGSGCLGGGGATGA
QGAQGPAGTPIPVTIAAIGNSNAQTISPGTNIQFNQVFEINNINFNDTADTLTILETGVYDISFSASTTFPGSSPFGFGI
SFNGQPPTRNFSTNVIGSAVSFSTIVTLEAGTTISVQPTANTISIPNTGDTTATLSVFRIY
>Mature_301_residues
MNNKNKGKVFYGNDCCEVRACSHINISKSELTEFVRLLQALGQAIQAVFQNPSQTNINNLIAALNNLQKFLNCLDLSPAQ
KQIGNSIIANLLTILRTTPFSCGALYVELQSLLNYLLYIAKLFKVDCCTIDKLVRLITEIQTILVQYGSGCLGGGGATGA
QGAQGPAGTPIPVTIAAIGNSNAQTISPGTNIQFNQVFEINNINFNDTADTLTILETGVYDISFSASTTFPGSSPFGFGI
SFNGQPPTRNFSTNVIGSAVSFSTIVTLEAGTTISVQPTANTISIPNTGDTTATLSVFRIY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31999; Mature: 31999

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNKNKGKVFYGNDCCEVRACSHINISKSELTEFVRLLQALGQAIQAVFQNPSQTNINNL
CCCCCCCCEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
IAALNNLQKFLNCLDLSPAQKQIGNSIIANLLTILRTTPFSCGALYVELQSLLNYLLYIA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
KLFKVDCCTIDKLVRLITEIQTILVQYGSGCLGGGGATGAQGAQGPAGTPIPVTIAAIGN
HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
SNAQTISPGTNIQFNQVFEINNINFNDTADTLTILETGVYDISFSASTTFPGSSPFGFGI
CCCEEECCCCCEEEEEEEEECCCCCCCCHHEEEEEECCCEEEEECCCCCCCCCCCCCEEE
SFNGQPPTRNFSTNVIGSAVSFSTIVTLEAGTTISVQPTANTISIPNTGDTTATLSVFRI
EECCCCCCCCCCCHHHHCCEEEEEEEEEECCCEEEEECCCCEEECCCCCCCCEEEEEEEE
Y
C
>Mature Secondary Structure
MNNKNKGKVFYGNDCCEVRACSHINISKSELTEFVRLLQALGQAIQAVFQNPSQTNINNL
CCCCCCCCEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
IAALNNLQKFLNCLDLSPAQKQIGNSIIANLLTILRTTPFSCGALYVELQSLLNYLLYIA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
KLFKVDCCTIDKLVRLITEIQTILVQYGSGCLGGGGATGAQGAQGPAGTPIPVTIAAIGN
HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
SNAQTISPGTNIQFNQVFEINNINFNDTADTLTILETGVYDISFSASTTFPGSSPFGFGI
CCCEEECCCCCEEEEEEEEECCCCCCCCHHEEEEEECCCEEEEECCCCCCCCCCCCCEEE
SFNGQPPTRNFSTNVIGSAVSFSTIVTLEAGTTISVQPTANTISIPNTGDTTATLSVFRI
EECCCCCCCCCCCHHHHCCEEEEEEEEEECCCEEEEECCCCEEECCCCCCCCEEEEEEEE
Y
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA