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The map label for this gene is ykwD [H]

Identifier: 30261396

GI number: 30261396

Start: 1253481

End: 1254308

Strand: Reverse

Name: ykwD [H]

Synonym: BA_1306

Alternate gene names: 30261396

Gene position: 1254308-1253481 (Counterclockwise)

Preceding gene: 30261397

Following gene: 30261385

Centisome position: 24.0

GC content: 39.13

Gene sequence:

>828_bases
ATGAAAAAGCGTGTTTTATTATCTGTAGCTGCTGCAACGGCTCTTACTTTAGGAGTATCTTCTTTAGATGCACAAGCTGC
AACAGTACAACCATCTAACGTAAAGATTCAAAATATTCAGCATTCAAAAGTGATGATGAAGCAAATGAGCCAACAAGAAT
TACAAGCATTCTTACAATCTATGGGAGTTGAATCATTAGCACAATGGCAACAAGGAAACTTCCAACCAAACTGCTTCATT
CCTGGTCAACAACCTACTGAAAATGTTGTAACTGAGCAACCAACAGCTAAGCCAGAAACTCAAAAGCCTGTTGAGCAAAA
ACCTGCCGAGCAAAAGCCTGCTGAAGAAGTTCAAAAACCAGAAGCTCAAAAGCCTGCTGAAAACAATAATACTCAAAAAC
CTGCTGAACAAAAACCAGCTGAGCAAAAACCTGCTGAAGAAGCAAAATCTTTAAGCGAGTTCGAACAACGTGTTGTTGAA
TTAACAAACGCTGAGCGTGCAAAACAAGGTTTACCAGCTTTAAAAATCGACACTGAATTAAGCAAAGTAGCACGCATTAA
ATCTGAAGATATGCAAAAAAATAACTACTTTGATCATAACAGCCCTACATACGGGTCTCCGTTTGACATGATGAAGAAAT
TTGGTATTTCTTATACATCTGCAGGTGAAAACATCGCTCAAGGCCAACGTACACCTGAAGAAGTAGTACAAGCTTGGATG
AACAGTGCTGGACACCGTGCAAACATCTTAAATAATGGCTTCACTCACATCGGTGTTGGCTATGTAGAAAGCGGTAACTA
CTGGACACAACAATTTATTACGAAGTAA

Upstream 100 bases:

>100_bases
CTCGCAAATTGTATGCTACGATGAATTTGTCAGTCAGACAGGCTGTCAAAAACAAATCGTGTGAAAACAAATTAAAACTT
TATATAGGGGGACACACATC

Downstream 100 bases:

>100_bases
ATAGATTAAAAGAGTCTTCTCATAATGAGAAGACTCTTTTTTATGTTTCATAACTTTCTATTATGTATGAGTATAGAGCG
TAGAACATAAACAAAATAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MKKRVLLSVAAATALTLGVSSLDAQAATVQPSNVKIQNIQHSKVMMKQMSQQELQAFLQSMGVESLAQWQQGNFQPNCFI
PGQQPTENVVTEQPTAKPETQKPVEQKPAEQKPAEEVQKPEAQKPAENNNTQKPAEQKPAEQKPAEEAKSLSEFEQRVVE
LTNAERAKQGLPALKIDTELSKVARIKSEDMQKNNYFDHNSPTYGSPFDMMKKFGISYTSAGENIAQGQRTPEEVVQAWM
NSAGHRANILNNGFTHIGVGYVESGNYWTQQFITK

Sequences:

>Translated_275_residues
MKKRVLLSVAAATALTLGVSSLDAQAATVQPSNVKIQNIQHSKVMMKQMSQQELQAFLQSMGVESLAQWQQGNFQPNCFI
PGQQPTENVVTEQPTAKPETQKPVEQKPAEQKPAEEVQKPEAQKPAENNNTQKPAEQKPAEQKPAEEAKSLSEFEQRVVE
LTNAERAKQGLPALKIDTELSKVARIKSEDMQKNNYFDHNSPTYGSPFDMMKKFGISYTSAGENIAQGQRTPEEVVQAWM
NSAGHRANILNNGFTHIGVGYVESGNYWTQQFITK
>Mature_275_residues
MKKRVLLSVAAATALTLGVSSLDAQAATVQPSNVKIQNIQHSKVMMKQMSQQELQAFLQSMGVESLAQWQQGNFQPNCFI
PGQQPTENVVTEQPTAKPETQKPVEQKPAEQKPAEEVQKPEAQKPAENNNTQKPAEQKPAEQKPAEEAKSLSEFEQRVVE
LTNAERAKQGLPALKIDTELSKVARIKSEDMQKNNYFDHNSPTYGSPFDMMKKFGISYTSAGENIAQGQRTPEEVVQAWM
NSAGHRANILNNGFTHIGVGYVESGNYWTQQFITK

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SCP domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014044
- InterPro:   IPR014258 [H]

Pfam domain/function: PF00188 SCP [H]

EC number: NA

Molecular weight: Translated: 30544; Mature: 30544

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRVLLSVAAATALTLGVSSLDAQAATVQPSNVKIQNIQHSKVMMKQMSQQELQAFLQS
CCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHH
MGVESLAQWQQGNFQPNCFIPGQQPTENVVTEQPTAKPETQKPVEQKPAEQKPAEEVQKP
HCHHHHHHHHCCCCCCCEEECCCCCHHHHCCCCCCCCCCCCCCHHHCCCCCCCHHHHHCC
EAQKPAENNNTQKPAEQKPAEQKPAEEAKSLSEFEQRVVELTNAERAKQGLPALKIDTEL
CCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHH
SKVARIKSEDMQKNNYFDHNSPTYGSPFDMMKKFGISYTSAGENIAQGQRTPEEVVQAWM
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHH
NSAGHRANILNNGFTHIGVGYVESGNYWTQQFITK
HCCCCCCHHHHCCCCEECCEEEECCCHHHHHHHCC
>Mature Secondary Structure
MKKRVLLSVAAATALTLGVSSLDAQAATVQPSNVKIQNIQHSKVMMKQMSQQELQAFLQS
CCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHH
MGVESLAQWQQGNFQPNCFIPGQQPTENVVTEQPTAKPETQKPVEQKPAEQKPAEEVQKP
HCHHHHHHHHCCCCCCCEEECCCCCHHHHCCCCCCCCCCCCCCHHHCCCCCCCHHHHHCC
EAQKPAENNNTQKPAEQKPAEQKPAEEAKSLSEFEQRVVELTNAERAKQGLPALKIDTEL
CCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHH
SKVARIKSEDMQKNNYFDHNSPTYGSPFDMMKKFGISYTSAGENIAQGQRTPEEVVQAWM
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHH
NSAGHRANILNNGFTHIGVGYVESGNYWTQQFITK
HCCCCCCHHHHCCCCEECCEEEECCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]