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The map label for this gene is 30261318

Identifier: 30261318

GI number: 30261318

Start: 1182398

End: 1183546

Strand: Reverse

Name: 30261318

Synonym: BA_1222

Alternate gene names: NA

Gene position: 1183546-1182398 (Counterclockwise)

Preceding gene: 30261329

Following gene: 30261317

Centisome position: 22.64

GC content: 50.48

Gene sequence:

>1149_bases
ATGTCAAATAATAATTATTCAAATGGATTAAACCCCGATGAATCTTTATCAGCTAGTGCATTTGACCCTAATCTTGTAGG
ACCTACATTACCACCGATACCACCATTTACCCTTCCTACCGGACCAACTGGGCCGACTGGACCGACTGGGCCGACTGGGC
CAACTGGACCAACTGGGCCGACTGGGCCAACTGGACCAACTGGGCCAACTGGAGACACTGGTACTACTGGACCAACTGGG
CCGACTGGGCCAACTGGACCAACTGGGCCAACTGGAGACACTGGTACTACTGGACCAACTGGGCCAACTGGACCAACTGG
GCCGACTGGGCCAACTGGACCAACTGGGCCAACTGGAGACACTGGTACTACTGGACCAACTGGGCCAACTGGACCAACTG
GACCAACTGGGCCAACTGGAGACACTGGTACTACTGGACCAACTGGGCCAACTGGACCAACTGGACCAACTGGGCCGACT
GGACCGACTGGGCCGACTGGGCCAACTGGACCAACTGGGCCGACTGGGCCAACTGGACCAACTGGGCCAACTGGAGACAC
TGGTACTACTGGACCAACTGGGCCAACTGGACCAACTGGACCAACTGGGCCAACTGGAGACACTGGTACTACTGGACCAA
CTGGGCCAACTGGACCAACTGGACCAACTGGGCCAACTGGACCAACTGGGCCAACTGGTGCTACCGGACTGACTGGACCG
ACTGGACCGACTGGGCCATCCGGACTAGGACTTCCAGCAGGACTATATGCATTTAACTCCGGTGGGATTTCTTTAGATTT
AGGAATTAATGATCCAGTACCATTTAATACTGTTGGATCTCAGTTTGGTACAGCAATTTCTCAATTAGATGCTGATACTT
TCGTAATTAGTGAAACTGGATTCTATAAAATTACTGTTATCGCTAATACTGCAACAGCAAGTGTATTAGGAGGTCTTACA
ATCCAAGTGAATGGAGTACCTGTACCAGGTACTGGATCAAGTTTGATTTCACTCGGAGCACCTATCGTTATTCAAGCAAT
TACGCAAATTACGACAACTCCATCATTAGTTGAAGTAATTGTTACAGGGCTTGGACTATCACTAGCTCTTGGCACGAGTG
CATCCATTATTATTGAAAAAGTTGCTTAA

Upstream 100 bases:

>100_bases
TCAAGTAGTTTAAGATTTCTTTTCAATAATTCAAATGTCCGTGTCATTTTCTTTCGGTTTTGCATCTACTATATAATGAA
CGCTTTATGGAGGTGAATTT

Downstream 100 bases:

>100_bases
TTTTTTACTTAGCAGTAAAACTGATATCAGTTTTACTGCTTTTTCATTTTTAAATTCAATCATTAAATCTTCCTTTTCTA
CATAGTCATAATGTTGTATG

Product: hypothetical protein

Products: NA

Alternate protein names: Triple Helix Repeat-Containing Collagen

Number of amino acids: Translated: 382; Mature: 381

Protein sequence:

>382_residues
MSNNNYSNGLNPDESLSASAFDPNLVGPTLPPIPPFTLPTGPTGPTGPTGPTGPTGPTGPTGPTGPTGPTGDTGTTGPTG
PTGPTGPTGPTGDTGTTGPTGPTGPTGPTGPTGPTGPTGDTGTTGPTGPTGPTGPTGPTGDTGTTGPTGPTGPTGPTGPT
GPTGPTGPTGPTGPTGPTGPTGPTGDTGTTGPTGPTGPTGPTGPTGDTGTTGPTGPTGPTGPTGPTGPTGPTGATGLTGP
TGPTGPSGLGLPAGLYAFNSGGISLDLGINDPVPFNTVGSQFGTAISQLDADTFVISETGFYKITVIANTATASVLGGLT
IQVNGVPVPGTGSSLISLGAPIVIQAITQITTTPSLVEVIVTGLGLSLALGTSASIIIEKVA

Sequences:

>Translated_382_residues
MSNNNYSNGLNPDESLSASAFDPNLVGPTLPPIPPFTLPTGPTGPTGPTGPTGPTGPTGPTGPTGPTGPTGDTGTTGPTG
PTGPTGPTGPTGDTGTTGPTGPTGPTGPTGPTGPTGPTGDTGTTGPTGPTGPTGPTGPTGDTGTTGPTGPTGPTGPTGPT
GPTGPTGPTGPTGPTGPTGPTGPTGDTGTTGPTGPTGPTGPTGPTGDTGTTGPTGPTGPTGPTGPTGPTGPTGATGLTGP
TGPTGPSGLGLPAGLYAFNSGGISLDLGINDPVPFNTVGSQFGTAISQLDADTFVISETGFYKITVIANTATASVLGGLT
IQVNGVPVPGTGSSLISLGAPIVIQAITQITTTPSLVEVIVTGLGLSLALGTSASIIIEKVA
>Mature_381_residues
SNNNYSNGLNPDESLSASAFDPNLVGPTLPPIPPFTLPTGPTGPTGPTGPTGPTGPTGPTGPTGPTGPTGDTGTTGPTGP
TGPTGPTGPTGDTGTTGPTGPTGPTGPTGPTGPTGPTGDTGTTGPTGPTGPTGPTGPTGDTGTTGPTGPTGPTGPTGPTG
PTGPTGPTGPTGPTGPTGPTGPTGDTGTTGPTGPTGPTGPTGPTGDTGTTGPTGPTGPTGPTGPTGPTGPTGATGLTGPT
GPTGPSGLGLPAGLYAFNSGGISLDLGINDPVPFNTVGSQFGTAISQLDADTFVISETGFYKITVIANTATASVLGGLTI
QVNGVPVPGTGSSLISLGAPIVIQAITQITTTPSLVEVIVTGLGLSLALGTSASIIIEKVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI56847616, Length=275, Percent_Identity=33.8181818181818, Blast_Score=99, Evalue=6e-21,
Organism=Homo sapiens, GI65301115, Length=275, Percent_Identity=33.8181818181818, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI115392133, Length=211, Percent_Identity=42.1800947867299, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI48762934, Length=163, Percent_Identity=46.0122699386503, Blast_Score=93, Evalue=5e-19,
Organism=Homo sapiens, GI111118976, Length=243, Percent_Identity=39.5061728395062, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI122937273, Length=382, Percent_Identity=30.6282722513089, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI89363017, Length=234, Percent_Identity=41.025641025641, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI111118974, Length=243, Percent_Identity=39.5061728395062, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI11386161, Length=235, Percent_Identity=40, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI111118968, Length=205, Percent_Identity=40, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI111118972, Length=205, Percent_Identity=40, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI111118970, Length=205, Percent_Identity=40, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI32140760, Length=205, Percent_Identity=42.4390243902439, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI110735435, Length=233, Percent_Identity=38.6266094420601, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI5803080, Length=221, Percent_Identity=37.10407239819, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI183583553, Length=241, Percent_Identity=34.0248962655602, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI115527062, Length=216, Percent_Identity=37.037037037037, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI115527070, Length=216, Percent_Identity=37.037037037037, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI156616290, Length=179, Percent_Identity=38.5474860335196, Blast_Score=72, Evalue=8e-13,
Organism=Homo sapiens, GI115527066, Length=216, Percent_Identity=37.037037037037, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI73486666, Length=226, Percent_Identity=38.4955752212389, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI299523253, Length=238, Percent_Identity=41.1764705882353, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI98985806, Length=142, Percent_Identity=42.9577464788732, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI299523257, Length=142, Percent_Identity=42.9577464788732, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI98985810, Length=142, Percent_Identity=42.9577464788732, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI61699226, Length=178, Percent_Identity=43.8202247191011, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI18780273, Length=201, Percent_Identity=35.8208955223881, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI119508426, Length=218, Percent_Identity=38.5321100917431, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI4502961, Length=239, Percent_Identity=33.0543933054393, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI154759255, Length=260, Percent_Identity=33.8461538461538, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI193203538, Length=210, Percent_Identity=43.3333333333333, Blast_Score=88, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI71992048, Length=225, Percent_Identity=36.4444444444444, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17539078, Length=189, Percent_Identity=39.6825396825397, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17569903, Length=163, Percent_Identity=42.3312883435583, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17535735, Length=138, Percent_Identity=43.4782608695652, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI17137252, Length=227, Percent_Identity=38.7665198237885, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24642197, Length=235, Percent_Identity=23.4042553191489, Blast_Score=75, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24581820, Length=230, Percent_Identity=38.695652173913, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24581822, Length=230, Percent_Identity=38.695652173913, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24581824, Length=230, Percent_Identity=38.695652173913, Blast_Score=72, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35305; Mature: 35174

Theoretical pI: Translated: 3.25; Mature: 3.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNNNYSNGLNPDESLSASAFDPNLVGPTLPPIPPFTLPTGPTGPTGPTGPTGPTGPTGP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TGPTGPTGPTGDTGTTGPTGPTGPTGPTGPTGDTGTTGPTGPTGPTGPTGPTGPTGPTGD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TGTTGPTGPTGPTGPTGPTGDTGTTGPTGPTGPTGPTGPTGPTGPTGPTGPTGPTGPTGP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TGPTGDTGTTGPTGPTGPTGPTGPTGDTGTTGPTGPTGPTGPTGPTGPTGPTGATGLTGP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TGPTGPSGLGLPAGLYAFNSGGISLDLGINDPVPFNTVGSQFGTAISQLDADTFVISETG
CCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCC
FYKITVIANTATASVLGGLTIQVNGVPVPGTGSSLISLGAPIVIQAITQITTTPSLVEVI
CEEEEEEECCHHHHHHCCEEEEECCEECCCCCHHHHHHCCHHHHHHHHHHHCCHHHHHHH
VTGLGLSLALGTSASIIIEKVA
HHHCCCEEECCCCCEEEEEECC
>Mature Secondary Structure 
SNNNYSNGLNPDESLSASAFDPNLVGPTLPPIPPFTLPTGPTGPTGPTGPTGPTGPTGP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TGPTGPTGPTGDTGTTGPTGPTGPTGPTGPTGDTGTTGPTGPTGPTGPTGPTGPTGPTGD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TGTTGPTGPTGPTGPTGPTGDTGTTGPTGPTGPTGPTGPTGPTGPTGPTGPTGPTGPTGP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TGPTGDTGTTGPTGPTGPTGPTGPTGDTGTTGPTGPTGPTGPTGPTGPTGPTGATGLTGP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TGPTGPSGLGLPAGLYAFNSGGISLDLGINDPVPFNTVGSQFGTAISQLDADTFVISETG
CCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCC
FYKITVIANTATASVLGGLTIQVNGVPVPGTGSSLISLGAPIVIQAITQITTTPSLVEVI
CEEEEEEECCHHHHHHCCEEEEECCEECCCCCHHHHHHCCHHHHHHHHHHHCCHHHHHHH
VTGLGLSLALGTSASIIIEKVA
HHHCCCEEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA