Click here to switch to the map view.

The map label for this gene is gerYA [H]

Identifier: 30260909

GI number: 30260909

Start: 783681

End: 785186

Strand: Reverse

Name: gerYA [H]

Synonym: BA_0763

Alternate gene names: 30260909

Gene position: 785186-783681 (Counterclockwise)

Preceding gene: 30260910

Following gene: 30260908

Centisome position: 15.02

GC content: 36.45

Gene sequence:

>1506_bases
ATGTTTCATTTATCATCTAAAAAGAAAAAACAAACCTTCTGTTCTATTCCAGATTTTATCCATGCGATGAAAAAATCAAG
CGACTTTTCTTCTTATAACATTATAGAAGATGGGACATTATGTTTGTTTTATTATAAATCTACAGTAGAATCACTTATTA
TTAAGCGATTCATTTTAGCACCTATAAAAAATAAATTAGACGAGATTCAACATATTGATGACATCTTAAATGTCGTATCT
ATTGAAGACACCCTCATCAATCCGTCCATTGATGATATTCGTGAGAAATTATTAGGTGGATACGTATTATTACAACTAAA
AAAAGGTTCAGGGCAAGCAGCGTATGCACTTCTACGCGCCGAGAGTACCGTTTTAGGAACTCGTTTAGTAAATGACACAG
AAAATGAATATAGTGTTATTGGCCCTAAAGTTGGTTTTGTTGAAAATGTTGATATAAATATACATTTATTACGCCGAAAT
ATCGTAACCGAGCAATTAATTTTCAAGGAAGTTAGCATTGGTTCTATGTCAAAAACCAAAATCGTAGTTGCTTACATCGA
AGGAATTACAAATGAACAGCATATTAACACCGCAATGCAACGTCTACAAGATATTGATTTTGATTACCCTTTTGATGCAA
CTCTAGTTGAACAGCTTATTAGTGATAATAGCAACTCTCCCTTCCGTGTTTTACTACCTACAGAACGTTTAGATCGCTCC
GTTTATGCATTACTGAATGGAGGAGTTGTCATTTTAACAGACGGTTCACCATATGCATTAGCTGGACCAGCGACATTACT
CGATTTCTTCGTCTCTCCAGAAGATTATTATTTACCATGGATAGCTGGCTCATTTCTTAGATTAGTTCGCTTTTTCGGAG
CAGCATTCTCTTTATTTTCATCAGCTATTTATACAGCTGTATTAACGTATCACTATCAAATGATTCCAGCTGATTTACTT
GGACCGATTATTTATTCCCGAGCCAATGTACCATTTCCACCTGTTTTAGAGGCACTTTTTTTAGAAATTACAATCGAATT
ACTGCGCGAAGCTGGGGCCCGTTTACCGACTAAAGTCGGCCAAACGATTGGTATTGTTGGTGGAATTGTAATTGGGCAAG
CATCTGTTGAAGCTGCTTTAACGAGCACCATCTTATTAATTGCTGTTGCGTTGTCTGCACTAGCCTCTTTTACAACACCG
ACAGTAAAAATGTCTTCTACAATCCGGATATTACGATTCCCTCTCATCATTTTAGCTGGAGCATTTGGTGGTGTAGGTCT
TATCGTCGGATTTGTATTCATATTAGCTCATTTAATTCACTTAAAATCACTTGGATCACCTTATTTATTACCTTTATACC
CATTTCGCGGTTTAGGTACAGCTGAAGGACTCCTTCGTCTTCCATTTAGTCAAACTGCTGAACGCGCTTCTTTTTTAAGG
CCCAAAAAGAAATGGCGCTATGATCCAAACAAAGCGAAAGAAAAACGTGACGGTGAGGAAAAATAA

Upstream 100 bases:

>100_bases
TACTCTTCCTTTTGTTTATGAACTTTCAATTTTTAAGTATAAATTCCCGTCTTTCCCAAAAACTAACACAAGTAAATGAT
ATATGTTAGGGGGTGGGAAA

Downstream 100 bases:

>100_bases
AAAATATTTTTTTATGCTTTTTCATTATCATTTTAATTTTCCAATCTGGTTGTACAGAAGCTCATATAGTTGATACACAG
CGAATGATTCACGTAGGTGG

Product: spore germination protein GerYA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 501; Mature: 501

Protein sequence:

>501_residues
MFHLSSKKKKQTFCSIPDFIHAMKKSSDFSSYNIIEDGTLCLFYYKSTVESLIIKRFILAPIKNKLDEIQHIDDILNVVS
IEDTLINPSIDDIREKLLGGYVLLQLKKGSGQAAYALLRAESTVLGTRLVNDTENEYSVIGPKVGFVENVDINIHLLRRN
IVTEQLIFKEVSIGSMSKTKIVVAYIEGITNEQHINTAMQRLQDIDFDYPFDATLVEQLISDNSNSPFRVLLPTERLDRS
VYALLNGGVVILTDGSPYALAGPATLLDFFVSPEDYYLPWIAGSFLRLVRFFGAAFSLFSSAIYTAVLTYHYQMIPADLL
GPIIYSRANVPFPPVLEALFLEITIELLREAGARLPTKVGQTIGIVGGIVIGQASVEAALTSTILLIAVALSALASFTTP
TVKMSSTIRILRFPLIILAGAFGGVGLIVGFVFILAHLIHLKSLGSPYLLPLYPFRGLGTAEGLLRLPFSQTAERASFLR
PKKKWRYDPNKAKEKRDGEEK

Sequences:

>Translated_501_residues
MFHLSSKKKKQTFCSIPDFIHAMKKSSDFSSYNIIEDGTLCLFYYKSTVESLIIKRFILAPIKNKLDEIQHIDDILNVVS
IEDTLINPSIDDIREKLLGGYVLLQLKKGSGQAAYALLRAESTVLGTRLVNDTENEYSVIGPKVGFVENVDINIHLLRRN
IVTEQLIFKEVSIGSMSKTKIVVAYIEGITNEQHINTAMQRLQDIDFDYPFDATLVEQLISDNSNSPFRVLLPTERLDRS
VYALLNGGVVILTDGSPYALAGPATLLDFFVSPEDYYLPWIAGSFLRLVRFFGAAFSLFSSAIYTAVLTYHYQMIPADLL
GPIIYSRANVPFPPVLEALFLEITIELLREAGARLPTKVGQTIGIVGGIVIGQASVEAALTSTILLIAVALSALASFTTP
TVKMSSTIRILRFPLIILAGAFGGVGLIVGFVFILAHLIHLKSLGSPYLLPLYPFRGLGTAEGLLRLPFSQTAERASFLR
PKKKWRYDPNKAKEKRDGEEK
>Mature_501_residues
MFHLSSKKKKQTFCSIPDFIHAMKKSSDFSSYNIIEDGTLCLFYYKSTVESLIIKRFILAPIKNKLDEIQHIDDILNVVS
IEDTLINPSIDDIREKLLGGYVLLQLKKGSGQAAYALLRAESTVLGTRLVNDTENEYSVIGPKVGFVENVDINIHLLRRN
IVTEQLIFKEVSIGSMSKTKIVVAYIEGITNEQHINTAMQRLQDIDFDYPFDATLVEQLISDNSNSPFRVLLPTERLDRS
VYALLNGGVVILTDGSPYALAGPATLLDFFVSPEDYYLPWIAGSFLRLVRFFGAAFSLFSSAIYTAVLTYHYQMIPADLL
GPIIYSRANVPFPPVLEALFLEITIELLREAGARLPTKVGQTIGIVGGIVIGQASVEAALTSTILLIAVALSALASFTTP
TVKMSSTIRILRFPLIILAGAFGGVGLIVGFVFILAHLIHLKSLGSPYLLPLYPFRGLGTAEGLLRLPFSQTAERASFLR
PKKKWRYDPNKAKEKRDGEEK

Specific function: Required for inosine germination [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 55503; Mature: 55503

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHLSSKKKKQTFCSIPDFIHAMKKSSDFSSYNIIEDGTLCLFYYKSTVESLIIKRFILA
CCCCCCCHHHHHHCCCHHHHHHHHCCCCCCCCCEECCCCEEEEEHHHHHHHHHHHHHHHH
PIKNKLDEIQHIDDILNVVSIEDTLINPSIDDIREKLLGGYVLLQLKKGSGQAAYALLRA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEEECCCCHHHHHHHHH
ESTVLGTRLVNDTENEYSVIGPKVGFVENVDINIHLLRRNIVTEQLIFKEVSIGSMSKTK
HHHHHHHHHHCCCCCCEEEECCCCCCEEECCEEEEEHHHHHHHHHHHHHHHCCCCCCCCE
IVVAYIEGITNEQHINTAMQRLQDIDFDYPFDATLVEQLISDNSNSPFRVLLPTERLDRS
EEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEEECHHHHHHH
VYALLNGGVVILTDGSPYALAGPATLLDFFVSPEDYYLPWIAGSFLRLVRFFGAAFSLFS
HHHHHCCCEEEEECCCCCEEECHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SAIYTAVLTYHYQMIPADLLGPIIYSRANVPFPPVLEALFLEITIELLREAGARLPTKVG
HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH
QTIGIVGGIVIGQASVEAALTSTILLIAVALSALASFTTPTVKMSSTIRILRFPLIILAG
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHH
AFGGVGLIVGFVFILAHLIHLKSLGSPYLLPLYPFRGLGTAEGLLRLPFSQTAERASFLR
CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHEECCCHHHHHHHHHCC
PKKKWRYDPNKAKEKRDGEEK
CHHHCCCCCCHHHHCCCCCCC
>Mature Secondary Structure
MFHLSSKKKKQTFCSIPDFIHAMKKSSDFSSYNIIEDGTLCLFYYKSTVESLIIKRFILA
CCCCCCCHHHHHHCCCHHHHHHHHCCCCCCCCCEECCCCEEEEEHHHHHHHHHHHHHHHH
PIKNKLDEIQHIDDILNVVSIEDTLINPSIDDIREKLLGGYVLLQLKKGSGQAAYALLRA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEEECCCCHHHHHHHHH
ESTVLGTRLVNDTENEYSVIGPKVGFVENVDINIHLLRRNIVTEQLIFKEVSIGSMSKTK
HHHHHHHHHHCCCCCCEEEECCCCCCEEECCEEEEEHHHHHHHHHHHHHHHCCCCCCCCE
IVVAYIEGITNEQHINTAMQRLQDIDFDYPFDATLVEQLISDNSNSPFRVLLPTERLDRS
EEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEEECHHHHHHH
VYALLNGGVVILTDGSPYALAGPATLLDFFVSPEDYYLPWIAGSFLRLVRFFGAAFSLFS
HHHHHCCCEEEEECCCCCEEECHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SAIYTAVLTYHYQMIPADLLGPIIYSRANVPFPPVLEALFLEITIELLREAGARLPTKVG
HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH
QTIGIVGGIVIGQASVEAALTSTILLIAVALSALASFTTPTVKMSSTIRILRFPLIILAG
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHH
AFGGVGLIVGFVFILAHLIHLKSLGSPYLLPLYPFRGLGTAEGLLRLPFSQTAERASFLR
CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHEECCCHHHHHHHHHCC
PKKKWRYDPNKAKEKRDGEEK
CHHHCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9852021 [H]