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The map label for this gene is yqeD [H]

Identifier: 30260756

GI number: 30260756

Start: 615352

End: 615900

Strand: Reverse

Name: yqeD [H]

Synonym: BA_0600

Alternate gene names: 30260756

Gene position: 615900-615352 (Counterclockwise)

Preceding gene: 30260759

Following gene: 30260752

Centisome position: 11.78

GC content: 35.52

Gene sequence:

>549_bases
ATGGCTGAAACAATTCAAAACTTCTTAACAGACTATTATTCAATCGCAATTCCACTTAGTATCTTAATTAACATCATCAT
CAGTCTTTTAGGTTTTATCCCTAGTATTTTTTTGACCGCTATTAACATACAGCTCTTCGGTGTAACAAACGGAACCATTA
TTTCGATCGCAGGTGAGGCATTAGGGGCTATTATCTCGTTTTATATTTATCGTATAGGCCTTCAGAAATTCACTCACAGC
AAAGTAAATAAGTATCCAAAGGTAGAACGCCTCCTTTATGTAAAAGGTAAAGAGGCCTTTCTACTCGTCCTATCATTCCG
ATTGATACCTTTTATCCCATCCAGTATCGTTACTTTATTTGCAGCTCTAGGTAAAATGTCATTACTATCCTTCAGTATTG
CCAGTACAATAGGTAAAATACCGGCTTTATTGATTGAAGTATATTCGGCATATCATGTTATCAATGGAACAAATGAAGCG
AAGTGGATTGTAACAATCGCGGGCGCTATTGGGTTGTTTTATTTGTGGAAAAAATGGAGAAAAAAATAA

Upstream 100 bases:

>100_bases
GATGGTTTTTTTATCAACGTTTTCTACATTATGTAAATTTGTACTTGCCTACACAATGGAAATATGGTGTAATGCAAAAA
AAGATAAAGGATTTTAAACA

Downstream 100 bases:

>100_bases
AGAAGGAGCCTATGCTCCTTCTTTATTTTTGAGGTATTTTATTATAACTATCCCTTAAAGCCTTAGTTTACGCCAACAGC
ACTATATGATTGCTTAACTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MAETIQNFLTDYYSIAIPLSILINIIISLLGFIPSIFLTAINIQLFGVTNGTIISIAGEALGAIISFYIYRIGLQKFTHS
KVNKYPKVERLLYVKGKEAFLLVLSFRLIPFIPSSIVTLFAALGKMSLLSFSIASTIGKIPALLIEVYSAYHVINGTNEA
KWIVTIAGAIGLFYLWKKWRKK

Sequences:

>Translated_182_residues
MAETIQNFLTDYYSIAIPLSILINIIISLLGFIPSIFLTAINIQLFGVTNGTIISIAGEALGAIISFYIYRIGLQKFTHS
KVNKYPKVERLLYVKGKEAFLLVLSFRLIPFIPSSIVTLFAALGKMSLLSFSIASTIGKIPALLIEVYSAYHVINGTNEA
KWIVTIAGAIGLFYLWKKWRKK
>Mature_181_residues
AETIQNFLTDYYSIAIPLSILINIIISLLGFIPSIFLTAINIQLFGVTNGTIISIAGEALGAIISFYIYRIGLQKFTHSK
VNKYPKVERLLYVKGKEAFLLVLSFRLIPFIPSSIVTLFAALGKMSLLSFSIASTIGKIPALLIEVYSAYHVINGTNEAK
WIVTIAGAIGLFYLWKKWRKK

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788049, Length=175, Percent_Identity=26.8571428571429, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 20253; Mature: 20121

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAETIQNFLTDYYSIAIPLSILINIIISLLGFIPSIFLTAINIQLFGVTNGTIISIAGEA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEHHHH
LGAIISFYIYRIGLQKFTHSKVNKYPKVERLLYVKGKEAFLLVLSFRLIPFIPSSIVTLF
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEECCCHHHHHHHHHHHHHCCHHHHHHHH
AALGKMSLLSFSIASTIGKIPALLIEVYSAYHVINGTNEAKWIVTIAGAIGLFYLWKKWR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHH
KK
CC
>Mature Secondary Structure 
AETIQNFLTDYYSIAIPLSILINIIISLLGFIPSIFLTAINIQLFGVTNGTIISIAGEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEHHHH
LGAIISFYIYRIGLQKFTHSKVNKYPKVERLLYVKGKEAFLLVLSFRLIPFIPSSIVTLF
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEECCCHHHHHHHHHHHHHCCHHHHHHHH
AALGKMSLLSFSIASTIGKIPALLIEVYSAYHVINGTNEAKWIVTIAGAIGLFYLWKKWR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHH
KK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]