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The map label for this gene is yxkH [H]

Identifier: 30260500

GI number: 30260500

Start: 338279

End: 339361

Strand: Reverse

Name: yxkH [H]

Synonym: BA_0330

Alternate gene names: 30260500

Gene position: 339361-338279 (Counterclockwise)

Preceding gene: 30260501

Following gene: 30260499

Centisome position: 6.49

GC content: 35.27

Gene sequence:

>1083_bases
ATGAGAAAATACGCAGCAATCGCTTTATGTACATCTGCCATTCTAGCAGGCTGTAATACTAGCAATGTAAGCCAGGAACC
TAACAAAGAGAGAAAGGTTCAAGAAACTAAGAAACAAGCAGAGACTGTGCAAGAACAAGGTAAAATTTCTTATAACCCAA
TTACACACGAATCTACAAATACTACTATTCATATGACAGATATAAAAGATACTTTAACTGAGGTACAATATAAAATTTGG
CGTACCGCTGATGGAAAGGAAACTGCTAAATCTTTGTCTTCTAAAGAAAAGGAAAAGCAATTTTCACTTCCTTTTGACAC
AAAAGAATTTGAAGGAAAACGCGGTGAGTTCCAAATTGAAGCAATAGGCATAAAAGAAGATGGGAAAACCATTCCACTCA
CAAAATCTGCTATTACTTTCGAGCAAAAGGTTCCCGTTCTTATGTACCATGCAATCGATGATTATCACGGTCAAGGTATT
AAAGACTTATTCGTATCACCCGCTAACTTTGAAGCTCAAATGAAATATTTAAAGGACAATGGTTATACACTGTTAACGTT
TGAACGCTGGGGCGATATAAATAAAGTAAATAAACCTATCTTTGTTACATTTGATGATGGTATGAAAAATAATATGAATG
CATTTCATGTTTTACAAAAGCTAAAAGACGATACGTTTAAACCGGTGGCAACAGAATATATGATTGTTAATAATGTTGAT
GCTGAAGGATCTCTTTCTACATCTGACATAAAAGAAATGGTGGATTCCGGCATTTTCTCTATGCAATCTCATACTGCAAC
ACATGCGGACTTGCCGAAGATTACAAACTATGAAGAAGAATTAAAGGAATCGAAAGAAAAGCTAGAAAAAATAACAGGTA
AACCCGTTATCGCAGTTGCCTATCCATTCGGTCACGTAGATGATAAAGTCGTTGCAGAAACGAAAAAATATTATCAATTC
GCAACAACAACAAAACCTGGAAAATTCATTACAAAAGGTGAACCCGATGAGTTGTTAAAAATGAAGCGTGTTCGCATACA
CCATACGACGACCGTAGAACAATTTGCTTCTTCGATTAAATAA

Upstream 100 bases:

>100_bases
TAAAATGACATGATGAACAAGGGTATATCCCCACCTCTCTTACAGCGGTGGGGATTTTAAATAGAAGTACGAAACATAAT
ACACAATAGAAGGTGATTTT

Downstream 100 bases:

>100_bases
CGATGAGAGCTCAATATATTTTGAGCTCTCTTTTTATGCTATATTTATATATATTTTTTGAATTTTCTTGTATTATATAT
AGTAAGAAATCTTTCAAATT

Product: polysaccharide deacetylase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MRKYAAIALCTSAILAGCNTSNVSQEPNKERKVQETKKQAETVQEQGKISYNPITHESTNTTIHMTDIKDTLTEVQYKIW
RTADGKETAKSLSSKEKEKQFSLPFDTKEFEGKRGEFQIEAIGIKEDGKTIPLTKSAITFEQKVPVLMYHAIDDYHGQGI
KDLFVSPANFEAQMKYLKDNGYTLLTFERWGDINKVNKPIFVTFDDGMKNNMNAFHVLQKLKDDTFKPVATEYMIVNNVD
AEGSLSTSDIKEMVDSGIFSMQSHTATHADLPKITNYEEELKESKEKLEKITGKPVIAVAYPFGHVDDKVVAETKKYYQF
ATTTKPGKFITKGEPDELLKMKRVRIHHTTTVEQFASSIK

Sequences:

>Translated_360_residues
MRKYAAIALCTSAILAGCNTSNVSQEPNKERKVQETKKQAETVQEQGKISYNPITHESTNTTIHMTDIKDTLTEVQYKIW
RTADGKETAKSLSSKEKEKQFSLPFDTKEFEGKRGEFQIEAIGIKEDGKTIPLTKSAITFEQKVPVLMYHAIDDYHGQGI
KDLFVSPANFEAQMKYLKDNGYTLLTFERWGDINKVNKPIFVTFDDGMKNNMNAFHVLQKLKDDTFKPVATEYMIVNNVD
AEGSLSTSDIKEMVDSGIFSMQSHTATHADLPKITNYEEELKESKEKLEKITGKPVIAVAYPFGHVDDKVVAETKKYYQF
ATTTKPGKFITKGEPDELLKMKRVRIHHTTTVEQFASSIK
>Mature_360_residues
MRKYAAIALCTSAILAGCNTSNVSQEPNKERKVQETKKQAETVQEQGKISYNPITHESTNTTIHMTDIKDTLTEVQYKIW
RTADGKETAKSLSSKEKEKQFSLPFDTKEFEGKRGEFQIEAIGIKEDGKTIPLTKSAITFEQKVPVLMYHAIDDYHGQGI
KDLFVSPANFEAQMKYLKDNGYTLLTFERWGDINKVNKPIFVTFDDGMKNNMNAFHVLQKLKDDTFKPVATEYMIVNNVD
AEGSLSTSDIKEMVDSGIFSMQSHTATHADLPKITNYEEELKESKEKLEKITGKPVIAVAYPFGHVDDKVVAETKKYYQF
ATTTKPGKFITKGEPDELLKMKRVRIHHTTTVEQFASSIK

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 40792; Mature: 40792

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKYAAIALCTSAILAGCNTSNVSQEPNKERKVQETKKQAETVQEQGKISYNPITHESTN
CCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCC
TTIHMTDIKDTLTEVQYKIWRTADGKETAKSLSSKEKEKQFSLPFDTKEFEGKRGEFQIE
CEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCEEEE
AIGIKEDGKTIPLTKSAITFEQKVPVLMYHAIDDYHGQGIKDLFVSPANFEAQMKYLKDN
EEEEECCCCCCCCCHHHEEHHCCCCEEEEEEHHHHCCCCHHHHHCCCCCHHHHHHEEECC
GYTLLTFERWGDINKVNKPIFVTFDDGMKNNMNAFHVLQKLKDDTFKPVATEYMIVNNVD
CCEEEEECCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCC
AEGSLSTSDIKEMVDSGIFSMQSHTATHADLPKITNYEEELKESKEKLEKITGKPVIAVA
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEE
YPFGHVDDKVVAETKKYYQFATTTKPGKFITKGEPDELLKMKRVRIHHTTTVEQFASSIK
ECCCCCCCHHHHHHHHHHEEECCCCCCCEEECCCHHHHHHHHHHHEECHHHHHHHHHHCC
>Mature Secondary Structure
MRKYAAIALCTSAILAGCNTSNVSQEPNKERKVQETKKQAETVQEQGKISYNPITHESTN
CCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCC
TTIHMTDIKDTLTEVQYKIWRTADGKETAKSLSSKEKEKQFSLPFDTKEFEGKRGEFQIE
CEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCEEEE
AIGIKEDGKTIPLTKSAITFEQKVPVLMYHAIDDYHGQGIKDLFVSPANFEAQMKYLKDN
EEEEECCCCCCCCCHHHEEHHCCCCEEEEEEHHHHCCCCHHHHHCCCCCHHHHHHEEECC
GYTLLTFERWGDINKVNKPIFVTFDDGMKNNMNAFHVLQKLKDDTFKPVATEYMIVNNVD
CCEEEEECCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCC
AEGSLSTSDIKEMVDSGIFSMQSHTATHADLPKITNYEEELKESKEKLEKITGKPVIAVA
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEE
YPFGHVDDKVVAETKKYYQFATTTKPGKFITKGEPDELLKMKRVRIHHTTTVEQFASSIK
ECCCCCCCHHHHHHHHHHEEECCCCCCCEEECCCHHHHHHHHHHHEECHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]