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The map label for this gene is ydiF [H]

Identifier: 30260438

GI number: 30260438

Start: 254436

End: 256358

Strand: Reverse

Name: ydiF [H]

Synonym: BA_0262

Alternate gene names: 30260438

Gene position: 256358-254436 (Counterclockwise)

Preceding gene: 30260440

Following gene: 30260432

Centisome position: 4.9

GC content: 36.09

Gene sequence:

>1923_bases
TTGATTTTATTACAAGTAAACGCGCTTTCGAAATTATACGGTGCAGAAACGATTCTTGCAAACATAAAATTGGAAGTTCA
AACGAAAGATCGTATCGCATTAGTCGGACGAAATGGAGCCGGAAAATCTACATTATTAAAAATAATAGCGGGTGAGCTAT
CTCATGATGGTGGCGAAATTATAAAACCGAAAGATGTCTCAATGGGATATTTAGCTCAAAATACCGGTTTAGAAACATCT
TTAACAATTTGGGATGAAATGCTAACCGTCTTTACACACTTGCAGCAAATGGAGACAAAACTTCGAAGGCTAGAGCAAGA
GATGGGAAAAGAAGAAAACTTTTCAAACGAGGCTACATATGAAAGATTATTAGCTGATTATGACCAATTACAATTAGATT
ATAAAGATCAAGGTGGCTATCAGTACGAAGCAGATATCCGTTCGATTTTAAGTGGTCTTGGCTTCCCAGTTGAAACGCAC
CAGACGACGATTTCGACATTAAGCGGTGGACAAAAAACACGATTAGCTCTCGGTAAATTATTATTAACGAAACCAGACCT
ACTTATTTTGGACGAGCCTACAAACCATTTAGACATCGAAACATTAACATGGCTTGAACAATATTTACAAGGTTATCCTG
GGGCAATACTAATCGTTTCCCATGACCGTTATTTCTTAGATAAACTTGTTACACAAGTATATGAAATTTCGAATAAAGAA
AGTAGACGATTTGTTGGTAACTACAGTAAATATTTAGACTTAAAATCAGCACTATACGAACAAGAAATGAAACGTTATGA
AAAACAACAAGATGAAATCGCTAAGCTGGAGGACTTCGTTCAAAAGAATATAGCTCGTGCATCTACGACAAAACGTGCAC
AAAGTCGCCGGAAACAATTAGACCGAATGGAATTATTAACAAGACCATTAGGGGATTCTAAGTCAGCTTCCTTCCACTTT
GATATCGAAAAACAAAGTGGCAATGATGTTTTACAAGTAAAGGATGCAACTATCGGCTATGATAAGGATCCAATTATTGA
ACATGTAACAATGCGCTTAACTCGCGGAGATAGCGTTGCTTTAGTTGGTCCAAATGGAATTGGGAAATCCACATTGTTAA
AATCCATTGTGAATAAGTTACCACTATTACATGGTGATGTTTCTTTCGGATCCAATGTATCCGTTGGTTATTATGATCAG
GAACAAGCTAATTTAACATCTTCCAAGCGAGTTTTAAATGAATTATGGGATGAATATCCACTGCAACCTGAAAAAGAAAT
TCGCACGATATTAGGTAACTTCTTATTCACAGGAGATGATGTATTAAAGCCAGTATCTTCTCTTAGTGGTGGACAAAAAG
CTCGGTTAGCTCTTGCAAAACTTATGATGCAAAAATCAAATTTATTAATTCTCGACGAGCCTACAAACCATCTTGATTTA
AATAGTAAAGAAATCTTGGAAAATGCTTTAATTGATTATCCTGGTACCCTTCTATTTGTTTCACATGACCGCTACTTTAT
TAATCGTGTAACGACAACTGTTATTGAGTTATCAACAGAAGGTGCACAGGAATACTTAGGGGATTACGATTACTACGTTG
AAAAGAAAAATGAGATGATCGAACGTGCGGAATTAGAACAAGAAGATGAAACTCCGGTTCAAAAGACAGTTGCACAAGAA
AAATTAAATTACCTGGAAGAAAAAGAGCGCAAAAAGTTGGAGCGTCAACGTACTCGAAAAATTGAGGAACTAGAACAAAA
CATTGTACAATTTGAAGAAGAAATTGCTACGTTAGAAGATCAACTTTGCTTACCAGAAATATATGCAGATTATGAAAAGG
CTAGTGAAATTACAACGAAAAAGCAAACACTACAAGAGCAACTGGATGCTTGTATGGCAGAATGGGAAGAGCTGCATGTA
TAA

Upstream 100 bases:

>100_bases
AGAAGAAGTATTCTCTCTGTATTTTAAACTATACACTATTTTTAGTATGATTGAGAAATATAAACATGGCAAAGTTAAGA
AATTATTTGAGGTGAAAACA

Downstream 100 bases:

>100_bases
ATATATTTAAATAAGGAAGATGTCTCATAAGTCAGGATTTTTGACTATGCGACATCTTTTTCTTTTAGTACATAAATAAT
TTTTTGAATATATCAATCGT

Product: ABC transporter, ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 640; Mature: 640

Protein sequence:

>640_residues
MILLQVNALSKLYGAETILANIKLEVQTKDRIALVGRNGAGKSTLLKIIAGELSHDGGEIIKPKDVSMGYLAQNTGLETS
LTIWDEMLTVFTHLQQMETKLRRLEQEMGKEENFSNEATYERLLADYDQLQLDYKDQGGYQYEADIRSILSGLGFPVETH
QTTISTLSGGQKTRLALGKLLLTKPDLLILDEPTNHLDIETLTWLEQYLQGYPGAILIVSHDRYFLDKLVTQVYEISNKE
SRRFVGNYSKYLDLKSALYEQEMKRYEKQQDEIAKLEDFVQKNIARASTTKRAQSRRKQLDRMELLTRPLGDSKSASFHF
DIEKQSGNDVLQVKDATIGYDKDPIIEHVTMRLTRGDSVALVGPNGIGKSTLLKSIVNKLPLLHGDVSFGSNVSVGYYDQ
EQANLTSSKRVLNELWDEYPLQPEKEIRTILGNFLFTGDDVLKPVSSLSGGQKARLALAKLMMQKSNLLILDEPTNHLDL
NSKEILENALIDYPGTLLFVSHDRYFINRVTTTVIELSTEGAQEYLGDYDYYVEKKNEMIERAELEQEDETPVQKTVAQE
KLNYLEEKERKKLERQRTRKIEELEQNIVQFEEEIATLEDQLCLPEIYADYEKASEITTKKQTLQEQLDACMAEWEELHV

Sequences:

>Translated_640_residues
MILLQVNALSKLYGAETILANIKLEVQTKDRIALVGRNGAGKSTLLKIIAGELSHDGGEIIKPKDVSMGYLAQNTGLETS
LTIWDEMLTVFTHLQQMETKLRRLEQEMGKEENFSNEATYERLLADYDQLQLDYKDQGGYQYEADIRSILSGLGFPVETH
QTTISTLSGGQKTRLALGKLLLTKPDLLILDEPTNHLDIETLTWLEQYLQGYPGAILIVSHDRYFLDKLVTQVYEISNKE
SRRFVGNYSKYLDLKSALYEQEMKRYEKQQDEIAKLEDFVQKNIARASTTKRAQSRRKQLDRMELLTRPLGDSKSASFHF
DIEKQSGNDVLQVKDATIGYDKDPIIEHVTMRLTRGDSVALVGPNGIGKSTLLKSIVNKLPLLHGDVSFGSNVSVGYYDQ
EQANLTSSKRVLNELWDEYPLQPEKEIRTILGNFLFTGDDVLKPVSSLSGGQKARLALAKLMMQKSNLLILDEPTNHLDL
NSKEILENALIDYPGTLLFVSHDRYFINRVTTTVIELSTEGAQEYLGDYDYYVEKKNEMIERAELEQEDETPVQKTVAQE
KLNYLEEKERKKLERQRTRKIEELEQNIVQFEEEIATLEDQLCLPEIYADYEKASEITTKKQTLQEQLDACMAEWEELHV
>Mature_640_residues
MILLQVNALSKLYGAETILANIKLEVQTKDRIALVGRNGAGKSTLLKIIAGELSHDGGEIIKPKDVSMGYLAQNTGLETS
LTIWDEMLTVFTHLQQMETKLRRLEQEMGKEENFSNEATYERLLADYDQLQLDYKDQGGYQYEADIRSILSGLGFPVETH
QTTISTLSGGQKTRLALGKLLLTKPDLLILDEPTNHLDIETLTWLEQYLQGYPGAILIVSHDRYFLDKLVTQVYEISNKE
SRRFVGNYSKYLDLKSALYEQEMKRYEKQQDEIAKLEDFVQKNIARASTTKRAQSRRKQLDRMELLTRPLGDSKSASFHF
DIEKQSGNDVLQVKDATIGYDKDPIIEHVTMRLTRGDSVALVGPNGIGKSTLLKSIVNKLPLLHGDVSFGSNVSVGYYDQ
EQANLTSSKRVLNELWDEYPLQPEKEIRTILGNFLFTGDDVLKPVSSLSGGQKARLALAKLMMQKSNLLILDEPTNHLDL
NSKEILENALIDYPGTLLFVSHDRYFINRVTTTVIELSTEGAQEYLGDYDYYVEKKNEMIERAELEQEDETPVQKTVAQE
KLNYLEEKERKKLERQRTRKIEELEQNIVQFEEEIATLEDQLCLPEIYADYEKASEITTKKQTLQEQLDACMAEWEELHV

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=531, Percent_Identity=31.8267419962335, Blast_Score=251, Evalue=2e-66,
Organism=Homo sapiens, GI27881506, Length=535, Percent_Identity=32.1495327102804, Blast_Score=249, Evalue=6e-66,
Organism=Homo sapiens, GI10947137, Length=535, Percent_Identity=32.1495327102804, Blast_Score=249, Evalue=6e-66,
Organism=Homo sapiens, GI69354671, Length=548, Percent_Identity=31.021897810219, Blast_Score=211, Evalue=2e-54,
Organism=Homo sapiens, GI10947135, Length=548, Percent_Identity=31.021897810219, Blast_Score=211, Evalue=2e-54,
Organism=Escherichia coli, GI1787041, Length=528, Percent_Identity=34.8484848484849, Blast_Score=331, Evalue=9e-92,
Organism=Escherichia coli, GI1789751, Length=630, Percent_Identity=31.4285714285714, Blast_Score=316, Evalue=3e-87,
Organism=Escherichia coli, GI2367384, Length=535, Percent_Identity=32.8971962616822, Blast_Score=277, Evalue=1e-75,
Organism=Escherichia coli, GI1787182, Length=653, Percent_Identity=30.781010719755, Blast_Score=265, Evalue=7e-72,
Organism=Escherichia coli, GI48994943, Length=526, Percent_Identity=23.0038022813688, Blast_Score=92, Evalue=1e-19,
Organism=Escherichia coli, GI1788165, Length=194, Percent_Identity=26.8041237113402, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1788506, Length=235, Percent_Identity=26.3829787234043, Blast_Score=70, Evalue=6e-13,
Organism=Escherichia coli, GI1788225, Length=230, Percent_Identity=26.5217391304348, Blast_Score=70, Evalue=6e-13,
Organism=Escherichia coli, GI1786803, Length=204, Percent_Identity=29.9019607843137, Blast_Score=69, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI17555318, Length=546, Percent_Identity=29.6703296703297, Blast_Score=236, Evalue=3e-62,
Organism=Caenorhabditis elegans, GI17553372, Length=506, Percent_Identity=32.2134387351779, Blast_Score=230, Evalue=2e-60,
Organism=Caenorhabditis elegans, GI17559834, Length=529, Percent_Identity=30.812854442344, Blast_Score=221, Evalue=7e-58,
Organism=Caenorhabditis elegans, GI17567243, Length=227, Percent_Identity=25.9911894273128, Blast_Score=69, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71996809, Length=174, Percent_Identity=32.183908045977, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI193211015, Length=174, Percent_Identity=33.3333333333333, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI193211017, Length=174, Percent_Identity=33.3333333333333, Blast_Score=68, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=541, Percent_Identity=32.5323475046211, Blast_Score=253, Evalue=7e-68,
Organism=Saccharomyces cerevisiae, GI6321121, Length=537, Percent_Identity=32.4022346368715, Blast_Score=247, Evalue=5e-66,
Organism=Saccharomyces cerevisiae, GI6325030, Length=396, Percent_Identity=28.2828282828283, Blast_Score=127, Evalue=4e-30,
Organism=Saccharomyces cerevisiae, GI6324314, Length=394, Percent_Identity=27.6649746192893, Blast_Score=114, Evalue=3e-26,
Organism=Saccharomyces cerevisiae, GI6323278, Length=392, Percent_Identity=25.2551020408163, Blast_Score=105, Evalue=3e-23,
Organism=Saccharomyces cerevisiae, GI6324985, Length=282, Percent_Identity=26.5957446808511, Blast_Score=66, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6323217, Length=251, Percent_Identity=28.6852589641434, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24666836, Length=528, Percent_Identity=32.9545454545455, Blast_Score=273, Evalue=4e-73,
Organism=Drosophila melanogaster, GI24642252, Length=543, Percent_Identity=31.1233885819521, Blast_Score=250, Evalue=2e-66,
Organism=Drosophila melanogaster, GI18859989, Length=543, Percent_Identity=31.1233885819521, Blast_Score=250, Evalue=2e-66,
Organism=Drosophila melanogaster, GI24641342, Length=530, Percent_Identity=31.5094339622642, Blast_Score=234, Evalue=1e-61,
Organism=Drosophila melanogaster, GI281361582, Length=304, Percent_Identity=25.3289473684211, Blast_Score=71, Evalue=3e-12,
Organism=Drosophila melanogaster, GI28574259, Length=185, Percent_Identity=28.6486486486486, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24649703, Length=210, Percent_Identity=26.6666666666667, Blast_Score=70, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24653245, Length=195, Percent_Identity=28.2051282051282, Blast_Score=65, Evalue=1e-10,
Organism=Drosophila melanogaster, GI281363262, Length=195, Percent_Identity=28.2051282051282, Blast_Score=65, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 73121; Mature: 73121

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILLQVNALSKLYGAETILANIKLEVQTKDRIALVGRNGAGKSTLLKIIAGELSHDGGEI
CEEEEEHHHHHHHHHHHEEEEEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCE
IKPKDVSMGYLAQNTGLETSLTIWDEMLTVFTHLQQMETKLRRLEQEMGKEENFSNEATY
ECCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
ERLLADYDQLQLDYKDQGGYQYEADIRSILSGLGFPVETHQTTISTLSGGQKTRLALGKL
HHHHHHHHHHEEEEECCCCEEEHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHH
LLTKPDLLILDEPTNHLDIETLTWLEQYLQGYPGAILIVSHDRYFLDKLVTQVYEISNKE
HHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHCCCH
SRRFVGNYSKYLDLKSALYEQEMKRYEKQQDEIAKLEDFVQKNIARASTTKRAQSRRKQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRMELLTRPLGDSKSASFHFDIEKQSGNDVLQVKDATIGYDKDPIIEHVTMRLTRGDSVA
HHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHEEECCCEEE
LVGPNGIGKSTLLKSIVNKLPLLHGDVSFGSNVSVGYYDQEQANLTSSKRVLNELWDEYP
EECCCCCCHHHHHHHHHHHCCCEECCCCCCCCCEECCCCCHHHCCHHHHHHHHHHHHHCC
LQPEKEIRTILGNFLFTGDDVLKPVSSLSGGQKARLALAKLMMQKSNLLILDEPTNHLDL
CCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCC
NSKEILENALIDYPGTLLFVSHDRYFINRVTTTVIELSTEGAQEYLGDYDYYVEKKNEMI
CHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHEECCCHHHHHHCCHHHHHHHHHHHH
ERAELEQEDETPVQKTVAQEKLNYLEEKERKKLERQRTRKIEELEQNIVQFEEEIATLED
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLCLPEIYADYEKASEITTKKQTLQEQLDACMAEWEELHV
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MILLQVNALSKLYGAETILANIKLEVQTKDRIALVGRNGAGKSTLLKIIAGELSHDGGEI
CEEEEEHHHHHHHHHHHEEEEEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCE
IKPKDVSMGYLAQNTGLETSLTIWDEMLTVFTHLQQMETKLRRLEQEMGKEENFSNEATY
ECCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
ERLLADYDQLQLDYKDQGGYQYEADIRSILSGLGFPVETHQTTISTLSGGQKTRLALGKL
HHHHHHHHHHEEEEECCCCEEEHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHH
LLTKPDLLILDEPTNHLDIETLTWLEQYLQGYPGAILIVSHDRYFLDKLVTQVYEISNKE
HHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHCCCH
SRRFVGNYSKYLDLKSALYEQEMKRYEKQQDEIAKLEDFVQKNIARASTTKRAQSRRKQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRMELLTRPLGDSKSASFHFDIEKQSGNDVLQVKDATIGYDKDPIIEHVTMRLTRGDSVA
HHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHEEECCCEEE
LVGPNGIGKSTLLKSIVNKLPLLHGDVSFGSNVSVGYYDQEQANLTSSKRVLNELWDEYP
EECCCCCCHHHHHHHHHHHCCCEECCCCCCCCCEECCCCCHHHCCHHHHHHHHHHHHHCC
LQPEKEIRTILGNFLFTGDDVLKPVSSLSGGQKARLALAKLMMQKSNLLILDEPTNHLDL
CCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCC
NSKEILENALIDYPGTLLFVSHDRYFINRVTTTVIELSTEGAQEYLGDYDYYVEKKNEMI
CHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHEECCCHHHHHHCCHHHHHHHHHHHH
ERAELEQEDETPVQKTVAQEKLNYLEEKERKKLERQRTRKIEELEQNIVQFEEEIATLED
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLCLPEIYADYEKASEITTKKQTLQEQLDACMAEWEELHV
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]