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The map label for this gene is yrhO [H]

Identifier: 270000581

GI number: 270000581

Start: 948301

End: 949122

Strand: Reverse

Name: yrhO [H]

Synonym: BA_0938

Alternate gene names: 270000581

Gene position: 949122-948301 (Counterclockwise)

Preceding gene: 30261069

Following gene: 30261051

Centisome position: 18.16

GC content: 35.52

Gene sequence:

>822_bases
TTGAAATATAAAAGCAAACATCGGAGGACAAAAAAAGTGGACTACATAGTGCAACAGCTTAAAAAAATTGGTTTTAATGA
ATATGAAGCTAAATCTTATGTATCTCTTGTGAAACAAGGGCCTGTCACAGCCTATCAAGTGAGTAAGGATTCGGGTGTCC
CAAGAGCGCGAATTTATGAGATTTTAGGTAACCTTGTAGAAAAAGGAATTGTCATGAAAGAAGAAATAAATGACACCACT
CGCTATTCACCTCTACCTGTTGAAATCTTTTTACAGAAGGCTCAATCAGAATGGCAGTCTACTTATGAAGGAATTAGTGA
TTCATTAAAGAAACTAGAAACTTCCGAGGAAAAAACGGATAATCGAGTAATTACTTTAAAAGACAATCAAACAATCATTA
GCTATTGTCAGACATTAATAAAAAAAGCAGAACAACGTATTGTCATTTCGATGTGGGATGAAATGTATGAAGCGTTAAAA
GAGGAGCTAGCTGAGGTAGCTGATAAAGTCACTGTACAAGGCATTACCCTGCATGTTGAAAATCCCATTAAAAATCTAGA
AGCCCATCGTATAACTGCTTATACCGAAACCCTCTCTACAGAACATTGGTTTATTTTATCAATAGATTCTAAAGAAATGA
TCTATGGACCATCACTTGAGGAGCGTAATATTGCTTTCTATACAGATGACCCAGTTCATATATACTTATTAGAGGATTAT
GTATGGCATGATGTTTTAGTAAATCGACTTGTCCGACGTAGCAAAGATGACTTGGAACAATGGATTACTGCGGAGAGAAG
ATCTTTCTTTATGGGGAAATAA

Upstream 100 bases:

>100_bases
ACAGATGGGTCTAAATAAAAATCCATACTAGTAGCCTCCCCTTTAGTCACTATTGTAATAGTAACTATCAATTTGCTAAA
TGTAAAGAGTTATTGTAACG

Downstream 100 bases:

>100_bases
GTATACAGAATTAGTTGAATTCACCAACATACTATTTCATAAATCCCATGAAGTTCAGGGGCCAAACTACGAGATACTTT
CGGCAAGATCCTTCAAGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MKYKSKHRRTKKVDYIVQQLKKIGFNEYEAKSYVSLVKQGPVTAYQVSKDSGVPRARIYEILGNLVEKGIVMKEEINDTT
RYSPLPVEIFLQKAQSEWQSTYEGISDSLKKLETSEEKTDNRVITLKDNQTIISYCQTLIKKAEQRIVISMWDEMYEALK
EELAEVADKVTVQGITLHVENPIKNLEAHRITAYTETLSTEHWFILSIDSKEMIYGPSLEERNIAFYTDDPVHIYLLEDY
VWHDVLVNRLVRRSKDDLEQWITAERRSFFMGK

Sequences:

>Translated_273_residues
MKYKSKHRRTKKVDYIVQQLKKIGFNEYEAKSYVSLVKQGPVTAYQVSKDSGVPRARIYEILGNLVEKGIVMKEEINDTT
RYSPLPVEIFLQKAQSEWQSTYEGISDSLKKLETSEEKTDNRVITLKDNQTIISYCQTLIKKAEQRIVISMWDEMYEALK
EELAEVADKVTVQGITLHVENPIKNLEAHRITAYTETLSTEHWFILSIDSKEMIYGPSLEERNIAFYTDDPVHIYLLEDY
VWHDVLVNRLVRRSKDDLEQWITAERRSFFMGK
>Mature_273_residues
MKYKSKHRRTKKVDYIVQQLKKIGFNEYEAKSYVSLVKQGPVTAYQVSKDSGVPRARIYEILGNLVEKGIVMKEEINDTT
RYSPLPVEIFLQKAQSEWQSTYEGISDSLKKLETSEEKTDNRVITLKDNQTIISYCQTLIKKAEQRIVISMWDEMYEALK
EELAEVADKVTVQGITLHVENPIKNLEAHRITAYTETLSTEHWFILSIDSKEMIYGPSLEERNIAFYTDDPVHIYLLEDY
VWHDVLVNRLVRRSKDDLEQWITAERRSFFMGK

Specific function: Unknown

COG id: COG1378

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021586
- InterPro:   IPR002831
- InterPro:   IPR011991 [H]

Pfam domain/function: PF11495 Regulator_TrmB; PF01978 TrmB [H]

EC number: NA

Molecular weight: Translated: 31985; Mature: 31985

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYKSKHRRTKKVDYIVQQLKKIGFNEYEAKSYVSLVKQGPVTAYQVSKDSGVPRARIYE
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHH
ILGNLVEKGIVMKEEINDTTRYSPLPVEIFLQKAQSEWQSTYEGISDSLKKLETSEEKTD
HHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC
NRVITLKDNQTIISYCQTLIKKAEQRIVISMWDEMYEALKEELAEVADKVTVQGITLHVE
CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEC
NPIKNLEAHRITAYTETLSTEHWFILSIDSKEMIYGPSLEERNIAFYTDDPVHIYLLEDY
CCHHCCHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCCCCCCEEEEECCCEEEEEEHHH
VWHDVLVNRLVRRSKDDLEQWITAERRSFFMGK
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKYKSKHRRTKKVDYIVQQLKKIGFNEYEAKSYVSLVKQGPVTAYQVSKDSGVPRARIYE
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHH
ILGNLVEKGIVMKEEINDTTRYSPLPVEIFLQKAQSEWQSTYEGISDSLKKLETSEEKTD
HHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC
NRVITLKDNQTIISYCQTLIKKAEQRIVISMWDEMYEALKEELAEVADKVTVQGITLHVE
CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEC
NPIKNLEAHRITAYTETLSTEHWFILSIDSKEMIYGPSLEERNIAFYTDDPVHIYLLEDY
CCHHCCHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCCCCCCEEEEECCCEEEEEEHHH
VWHDVLVNRLVRRSKDDLEQWITAERRSFFMGK
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]