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The map label for this gene is 270000543

Identifier: 270000543

GI number: 270000543

Start: 3298411

End: 3299232

Strand: Reverse

Name: 270000543

Synonym: BA_3593

Alternate gene names: NA

Gene position: 3299232-3298411 (Counterclockwise)

Preceding gene: 30263487

Following gene: 30263485

Centisome position: 63.12

GC content: 35.64

Gene sequence:

>822_bases
GTGTTTGATATAGAGAGAAATTTTAGGCCGTATAAATCAGAAGATCCGTCAGAGATAGTTGATATCGGAGCTGTAAAAAT
AGAAGCAAGTACAATGAAGGTAATTGGAGAATTTTCGGAGTTAGTAAAACCGGGGGCACGACTTACTCGTCATACGACAA
AATTAACGGGAATTACAAAGAAAGATTTAATTGGTGTCGAGAAATTCCCGCAAATTATAGAAAAATTTATTCGGTTTATC
GGAGAAGATTCTATATTTGTTACATGGGGAAAAGAAGATTATCGATTTCTATCTCATGATTGTACGTTACATAGTGTAGA
ATGCCCTTGTATGGAAAAAGAAAGAAGAATTGATTTACAAAAATTTGTTTTTCAAGCGTATGAAGAATTGTTTGAGCATA
CACCAAGTTTACAATCTGCAGTAGAACAGCTTGGTTTAATATGGGAAGGGAAGCAGCACCGAGCTTTAGCGGATGCTGAG
AATACAGCGAACATACTTCTTAAAGCATATAGCGAGAGAGATATTACTAAAAGGTATAAAAGACATGGCGAACTTGAACT
GGTAGAGAACGGAAAACTAACAGAAAAAGCGAAAAAAAAGATGCGGAAATGGGTATTTAAAGAAATGAGAAAAAATACAG
AGCGTCCTTTCGTTTGGAGTACATTTGAAAGTAGTGACACGTGGGAAAGTATAACGGAAAGATATTATATAAGTGAATCT
ACAATAGAACTACTGAAAAAGCATTTTCGTACGGCGGTTAGAAAGGCGGAAAGGCAGATTAGGTATTTGGCTGAGATGGA
GAAAGTAGTAGAAGAAAATTAA

Upstream 100 bases:

>100_bases
GCATAAAGTGTATGAATAAATAAATACTGAAAATAAAGTATGTGTGTGAAAAGGAATGTAGAAAGAGGTAAATAAATTGG
AAAACGCTACACATTTTATT

Downstream 100 bases:

>100_bases
TGACATAGTCTATTTTATTCATATGTACAACTAGACTTCAGGATTAAGTTGCTGAAGTCTAGTTGGAAAATTCACGGCTT
GTCCCGTATTCGTAATGGAG

Product: exonuclease

Products: NA

Alternate protein names: Exonuclease RNAse T And DNA Polymerase III; Exonuclease Family Protein; DNA Polymerase III Alpha Subunit; Inhibitor Of KinA Pathway Sporulation Exonuclease; DNA-Directed DNA Polymerase III Alpha Subunit

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPGARLTRHTTKLTGITKKDLIGVEKFPQIIEKFIRFI
GEDSIFVTWGKEDYRFLSHDCTLHSVECPCMEKERRIDLQKFVFQAYEELFEHTPSLQSAVEQLGLIWEGKQHRALADAE
NTANILLKAYSERDITKRYKRHGELELVENGKLTEKAKKKMRKWVFKEMRKNTERPFVWSTFESSDTWESITERYYISES
TIELLKKHFRTAVRKAERQIRYLAEMEKVVEEN

Sequences:

>Translated_273_residues
MFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPGARLTRHTTKLTGITKKDLIGVEKFPQIIEKFIRFI
GEDSIFVTWGKEDYRFLSHDCTLHSVECPCMEKERRIDLQKFVFQAYEELFEHTPSLQSAVEQLGLIWEGKQHRALADAE
NTANILLKAYSERDITKRYKRHGELELVENGKLTEKAKKKMRKWVFKEMRKNTERPFVWSTFESSDTWESITERYYISES
TIELLKKHFRTAVRKAERQIRYLAEMEKVVEEN
>Mature_273_residues
MFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPGARLTRHTTKLTGITKKDLIGVEKFPQIIEKFIRFI
GEDSIFVTWGKEDYRFLSHDCTLHSVECPCMEKERRIDLQKFVFQAYEELFEHTPSLQSAVEQLGLIWEGKQHRALADAE
NTANILLKAYSERDITKRYKRHGELELVENGKLTEKAKKKMRKWVFKEMRKNTERPFVWSTFESSDTWESITERYYISES
TIELLKKHFRTAVRKAERQIRYLAEMEKVVEEN

Specific function: Unknown

COG id: COG2176

COG function: function code L; DNA polymerase III, alpha subunit (gram-positive type)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32256; Mature: 32256

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPGARLTRHTTKLTGITK
CCCCCCCCCCCCCCCHHHHHHHHHEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCH
KDLIGVEKFPQIIEKFIRFIGEDSIFVTWGKEDYRFLSHDCTLHSVECPCMEKERRIDLQ
HHHHCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCEEEECCCCCCCHHHHCHHH
KFVFQAYEELFEHTPSLQSAVEQLGLIWEGKQHRALADAENTANILLKAYSERDITKRYK
HHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHH
RHGELELVENGKLTEKAKKKMRKWVFKEMRKNTERPFVWSTFESSDTWESITERYYISES
HCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCHH
TIELLKKHFRTAVRKAERQIRYLAEMEKVVEEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPGARLTRHTTKLTGITK
CCCCCCCCCCCCCCCHHHHHHHHHEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCH
KDLIGVEKFPQIIEKFIRFIGEDSIFVTWGKEDYRFLSHDCTLHSVECPCMEKERRIDLQ
HHHHCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCEEEECCCCCCCHHHHCHHH
KFVFQAYEELFEHTPSLQSAVEQLGLIWEGKQHRALADAENTANILLKAYSERDITKRYK
HHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHH
RHGELELVENGKLTEKAKKKMRKWVFKEMRKNTERPFVWSTFESSDTWESITERYYISES
HCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCHH
TIELLKKHFRTAVRKAERQIRYLAEMEKVVEEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA