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The map label for this gene is salR [H]

Identifier: 77748766

GI number: 77748766

Start: 4986041

End: 4987129

Strand: Reverse

Name: salR [H]

Synonym: XAC4226

Alternate gene names: 77748766

Gene position: 4987129-4986041 (Counterclockwise)

Preceding gene: 21244950

Following gene: 21244941

Centisome position: 96.36

GC content: 65.75

Gene sequence:

>1089_bases
TTGAAGAGGCCACGCTTGGAGAAGGTCAGGAAATCGGTCCGCCGCACCAGCCGCGCGACCACCATCGACGAGGTGGCAGC
GCTGGCAAAGGTCTCGCCGATGACGGTCTCGCGCGTGGTCAACAATACCGGCAGCGTGCGCGATGCCACCCGCGAACGGG
TCATGCGCGCAGTCGACAAGCTGGGCTACACGCCCAATCTTGCCGCCAGTGCACTGGCGGCCGCGCAGAGCACGCGGATT
GCGTTGATCTACAGCGATCCCAGCGGCGCCTACTTGCGCGAGTTGCTGCTGGGCGTGTTGCGGGTGGCATCGCGTACGTC
GATCCAGCTGGTGATCGACTGCTGGGACGACCTGGACGCCGATGCCGAACGCAAGGCGGCACGCAAGCTCGCCAAGGGCG
TTGCCGGTGTGATCCTGCCGCCGCCCTTGTGCGAATCCAGGGCTGCAGTGCTGGAGTTGGTGCGCGCCAAGGTGCCGGTG
GTGGCGATCGCCTCCAACCATTTCAGCCCGGATGTGGCGTGTGTGCGCATCGACGAATTCGCTGCAGCCAAAGAGATCAC
CGAACACCTGATCGCACGGGGGCATACGCGCATCGGCTACATCGCCGGGCATCCGAATCTGTCGGCCAGCACGCGGCGCT
TCGAAGGCTTTCAGGCGGCGCTGGCCGACGCCGGTTTGCGAATGGATCGGCACCTGGTGCAGCCGGGCGATTACACCTAC
AAATCCGGCCTGGTCGCCGCGGAAAAATTGCTGGCGCGCAAACGTCGCCCCAGCGCCATCTTCGCCAGCAACGACGACAT
GGCCGCCGCGGCAATCTCGGTCGCGCACCGGCGCGGTCTGGATGTGCCGCGCGATCTGTCGGTGGTCGGGTTCGACGACA
CCTCTGCCGCCACTGCGGTGTGGCCGGAAATCACCACCGTGCAGCAGCCCATCGCCGCCATGGCCGATGCCGCGCTGGAC
ATCTTGCTGAAGACGATTCGCGCCAGGGAGCGTACGGCAAGGATGGTCGATCATGTGGTCGCGCACCTGCTGGTCAAGCG
GGATTCGGTAGCCGCACCGATAGCGGACGATGCGGCCGAGTCAACGTAG

Upstream 100 bases:

>100_bases
TCTGCCTGCTTCCCGGTACCATGGCTCGCACTGTCATACCTGCACTCGGCGTCCGCGTTACCGCAGCAGCGCCCGTGCAT
CCCGCAGCTTTTGCACGCAT

Downstream 100 bases:

>100_bases
CGATCAGATCACTGCATGCCGCAGGGCGGATGTGGTCGTCTCGCAGGCCTGCATGCAACACATCAGCATTGCCGGTGTGC
GCTCACGTCTCTGTGGTCGC

Product: sal operon transcriptional repressor

Products: NA

Alternate protein names: Degradation activator [H]

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MKRPRLEKVRKSVRRTSRATTIDEVAALAKVSPMTVSRVVNNTGSVRDATRERVMRAVDKLGYTPNLAASALAAAQSTRI
ALIYSDPSGAYLRELLLGVLRVASRTSIQLVIDCWDDLDADAERKAARKLAKGVAGVILPPPLCESRAAVLELVRAKVPV
VAIASNHFSPDVACVRIDEFAAAKEITEHLIARGHTRIGYIAGHPNLSASTRRFEGFQAALADAGLRMDRHLVQPGDYTY
KSGLVAAEKLLARKRRPSAIFASNDDMAAAAISVAHRRGLDVPRDLSVVGFDDTSAATAVWPEITTVQQPIAAMADAALD
ILLKTIRARERTARMVDHVVAHLLVKRDSVAAPIADDAAEST

Sequences:

>Translated_362_residues
MKRPRLEKVRKSVRRTSRATTIDEVAALAKVSPMTVSRVVNNTGSVRDATRERVMRAVDKLGYTPNLAASALAAAQSTRI
ALIYSDPSGAYLRELLLGVLRVASRTSIQLVIDCWDDLDADAERKAARKLAKGVAGVILPPPLCESRAAVLELVRAKVPV
VAIASNHFSPDVACVRIDEFAAAKEITEHLIARGHTRIGYIAGHPNLSASTRRFEGFQAALADAGLRMDRHLVQPGDYTY
KSGLVAAEKLLARKRRPSAIFASNDDMAAAAISVAHRRGLDVPRDLSVVGFDDTSAATAVWPEITTVQQPIAAMADAALD
ILLKTIRARERTARMVDHVVAHLLVKRDSVAAPIADDAAEST
>Mature_362_residues
MKRPRLEKVRKSVRRTSRATTIDEVAALAKVSPMTVSRVVNNTGSVRDATRERVMRAVDKLGYTPNLAASALAAAQSTRI
ALIYSDPSGAYLRELLLGVLRVASRTSIQLVIDCWDDLDADAERKAARKLAKGVAGVILPPPLCESRAAVLELVRAKVPV
VAIASNHFSPDVACVRIDEFAAAKEITEHLIARGHTRIGYIAGHPNLSASTRRFEGFQAALADAGLRMDRHLVQPGDYTY
KSGLVAAEKLLARKRRPSAIFASNDDMAAAAISVAHRRGLDVPRDLSVVGFDDTSAATAVWPEITTVQQPIAAMADAALD
ILLKTIRARERTARMVDHVVAHLLVKRDSVAAPIADDAAEST

Specific function: Involved in the control of degradation of B.subtilis amidophosphoribosyltransferase (purF). Probably activates the gene for a degradative protease [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789202, Length=335, Percent_Identity=33.7313432835821, Blast_Score=150, Evalue=9e-38,
Organism=Escherichia coli, GI1790369, Length=347, Percent_Identity=30.2593659942363, Blast_Score=150, Evalue=2e-37,
Organism=Escherichia coli, GI1787948, Length=345, Percent_Identity=30.4347826086957, Blast_Score=146, Evalue=2e-36,
Organism=Escherichia coli, GI1790194, Length=309, Percent_Identity=30.42071197411, Blast_Score=145, Evalue=3e-36,
Organism=Escherichia coli, GI1789068, Length=337, Percent_Identity=30.8605341246291, Blast_Score=145, Evalue=3e-36,
Organism=Escherichia coli, GI1788474, Length=334, Percent_Identity=32.9341317365269, Blast_Score=135, Evalue=4e-33,
Organism=Escherichia coli, GI1786540, Length=343, Percent_Identity=29.7376093294461, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI48994940, Length=321, Percent_Identity=29.2834890965732, Blast_Score=114, Evalue=7e-27,
Organism=Escherichia coli, GI1787580, Length=336, Percent_Identity=25.297619047619, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1787906, Length=257, Percent_Identity=31.1284046692607, Blast_Score=95, Evalue=9e-21,
Organism=Escherichia coli, GI1789456, Length=325, Percent_Identity=25.5384615384615, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1790715, Length=328, Percent_Identity=24.6951219512195, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1786268, Length=312, Percent_Identity=25.9615384615385, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000843
- InterPro:   IPR010982
- InterPro:   IPR001761 [H]

Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 39015; Mature: 39015

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: PS00356 HTH_LACI_1 ; PS50932 HTH_LACI_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRPRLEKVRKSVRRTSRATTIDEVAALAKVSPMTVSRVVNNTGSVRDATRERVMRAVDK
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH
LGYTPNLAASALAAAQSTRIALIYSDPSGAYLRELLLGVLRVASRTSIQLVIDCWDDLDA
CCCCCCHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC
DAERKAARKLAKGVAGVILPPPLCESRAAVLELVRAKVPVVAIASNHFSPDVACVRIDEF
CHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEHHHH
AAAKEITEHLIARGHTRIGYIAGHPNLSASTRRFEGFQAALADAGLRMDRHLVQPGDYTY
HHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHCCCCCCCH
KSGLVAAEKLLARKRRPSAIFASNDDMAAAAISVAHRRGLDVPRDLSVVGFDDTSAATAV
HHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHH
WPEITTVQQPIAAMADAALDILLKTIRARERTARMVDHVVAHLLVKRDSVAAPIADDAAE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
ST
CC
>Mature Secondary Structure
MKRPRLEKVRKSVRRTSRATTIDEVAALAKVSPMTVSRVVNNTGSVRDATRERVMRAVDK
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH
LGYTPNLAASALAAAQSTRIALIYSDPSGAYLRELLLGVLRVASRTSIQLVIDCWDDLDA
CCCCCCHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC
DAERKAARKLAKGVAGVILPPPLCESRAAVLELVRAKVPVVAIASNHFSPDVACVRIDEF
CHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEHHHH
AAAKEITEHLIARGHTRIGYIAGHPNLSASTRRFEGFQAALADAGLRMDRHLVQPGDYTY
HHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHCCCCCCCH
KSGLVAAEKLLARKRRPSAIFASNDDMAAAAISVAHRRGLDVPRDLSVVGFDDTSAATAV
HHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHH
WPEITTVQQPIAAMADAALDILLKTIRARERTARMVDHVVAHLLVKRDSVAAPIADDAAE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
ST
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8407808; 9353932; 9384377 [H]