| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 77748713
Identifier: 77748713
GI number: 77748713
Start: 4007559
End: 4009982
Strand: Direct
Name: 77748713
Synonym: XAC3401
Alternate gene names: NA
Gene position: 4007559-4009982 (Clockwise)
Preceding gene: 21244125
Following gene: 21244127
Centisome position: 77.43
GC content: 67.95
Gene sequence:
>2424_bases ATGTCCATGCACGTGTCTCCCATACAACCTGCAGTTAGCGGCCCGATTGCCGATGCGCCGGTGTCCGCGCGCGGCCGGCG ATTGCTCGGCATGCTGCACGCGCAGTGCGTGCAGGCGCTGGGCGGACCGCTGCGGCTGACCGTGGTCGAGCTGGAACGCG AGCTATTGCATCAGGCCGAGCATGCGCGCAATAGCCAGATCCAGGCTGAAACCTACGCGCAGATGCGCGGCCTGCGCGAT CACATCGATCGCTTCCCGCAGGCATTCCTGCAGGAATTGGCGCAAGCGCTGGCCAGCCTGCGTGAACGCCCGGTACTGAC ACCATCGACCGATACGTCTGCGCAAACACAGATGCTGACCCTGGTCGAAGACACCGATATCGACCGCGACATCGTGCTGA GCGACATCGCACGTCGCGAGACATCGCGGCGCGCCAATGCACTGCTCTTGCTGGCGCAGCGCCTGGCGGTGATCGGTACG GTACCCGAATTCGAACTGGAAGAATTGCCGCTTGGCCCGTACGCGCTATGCCGCATCGTGCGTCGGTGCGGGGAAACGCT GGGGCTGAGCCTGGATGGACAGCTGACCCTGTACAAGGTGTTCGAGCGCCAGGTGATGGACCGACTGGGCGACCTGTTCG AAAGTGCAAACAGCGCGCTGGCCCAGGAAGGCATCCTGCCGGGGCTGGTCTATCACCCGTATCTGGTCAAGCCCACGCAG GTGCAGACGCGGCGTGCGCCGCCGGCAGCGGCGCCTGGGTCGAAAGACGCTGCCGCAATGAACAAGCCCGGTGCGGGCCC GCGCATGCCGCGGCCGGCCACCGGCTGGGCAGGCCAAGCCGCACCGACGGCGTGGCAGAGCGCCTTGCTGGATCCCGCTG CCGCGCCACCAGCACTGGCAATCGCCCCACCCGCGCTGTCGCCGGCGCTCAGCGATGCAGTGCAGGCGCTGGGCGGCTTG ATGGCATCGGCACGGCAATCGCAGGCAGCGGTGCACGCAAGCCACGCAGGCGCGGGGGCGCTCGCCCATCACGAGGTCAC GGCGCCCTCTCCCACCTCGCTTGCCGCTGTCGCCCAGGCATCGCAGCACAGCGCCGCCGCTGCGGTACCCAAGGCGGCGC TTGGCGATGCCTTGGCCAGCCTGCAAGGTGCGCTGGCCACGCAGGCGGCAGCAACGCCACAGGCATCCGGCATCGATGCG GTGCAGCGGCAGGTGCTGGAGGTGCTGCGCCGCCAGCACGGCCCCGATGCCGCGCTATCGCCGCAGGACAACGACACCTT CGACCTGCTCGGCCTGCTCTATGCGCAAATGCAGCGCGAAGTGCGCGAGCAAGCTCCCGCCCAGGCGTTGCTGGCCAAGT TGCAGGTGCCGGTGGTGCGCGCGGCGCTAGCCGACGCGCACTTTTTCGTGCGCGACCAGCACCCGGTGCGCGAATTGCTC AACACCGTGGCCGAGTCCGGTGCCGTGTGGCTGGGCGAGGACGATGCCGACCCGCACCTGCTGCACAAGCTGGGCAGCGC GGTCGACAAGATCGTCAACGACTATCAAGGCGACGAGGCTGTTTTCGCCGCGGCCAATGACGATATTCAGGCGCATCTGC GCACCCTCGCGCGCAAGGCCGAGGTGGCCGAGCGACGGCATGTGGATGCTGCGCGCGGAAAGGAGCGGCTGGAATCTGCC AAGCAGCAGGCCGAATCGCGCATCGAGCAGCTGTGCGAACAAAGCGCGCCGCCGCGCTTCGTGCAATCGCTGCTGCGCCA GGCCTGGTCGGACGTGCTCACGCTGACCTTGCTGCGGCAGGGCGAGCAGTCGCCCGAATGGGACGAACGCCAGGCGCTGA CCGCACGCATTGGCGAGGTCACCTGTCGCAGCAAGGGCCAGCCCATCGACATCGCGCTGGGCACCGAGGTGGAAACCGCG TTGCTGCAGGTGGGGTATCACCACGATGAAGCAGCGGCGATCGCACGGCGCTTGTCCACGCCCGGTGGCGAGGACGAGGT GACCTCGCGCACCGAGCTCGCCGCCAAACTCAAGGCACGCGCGCGGCTTGGCGACCAGGGCGACAGCGCTCCGCGCAAGC AGGCGGCCACGCCGCGCACGCCTGCCGAAGAGGAGTGCTACCTGCAGGTGCGCAGCTTGCCGTTCGGCACCTGGTTCGAA TTCGTGGTCAACCAGCAAGGTGACCTGCGCCGGCAACGCCTGTCCTGGTACAGCCCGATGACCGGCAACGCGCTGTTCGT GAATCAGCGTGGGCAGAAGGTGGGCGAGCACTCGCTGGACAGCCTGGCACGGCTGATGGCCGGTGGGCAGGCACGTTTGG TGGTGGAAGAAAAATCGCGTCTGATCGATCGCGCCTGGCATGCCACCGTGCGCACGCTGCGCAGCCTGGCCGGCCAGTCG CCTGTCGCCGAGGCCCAGCCATGA
Upstream 100 bases:
>100_bases AGCGCGGGCAGGATGCGCCGGCGCGCGCCGGTGCCGCGCGGTCAGCGAAAAAACATGCTACATAGCTCACGCTTTGAACC GAGCCAGCCTCCCCCCCCGG
Downstream 100 bases:
>100_bases TCCAGGACACCCGCCGCGCACCGCGCCGCCAGCCGACCGACCTGCTGCCGGTCATCGACACGCTCAGCGAGGTGCAGATC GGCCGGGTCGGCAATGTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 807; Mature: 806
Protein sequence:
>807_residues MSMHVSPIQPAVSGPIADAPVSARGRRLLGMLHAQCVQALGGPLRLTVVELERELLHQAEHARNSQIQAETYAQMRGLRD HIDRFPQAFLQELAQALASLRERPVLTPSTDTSAQTQMLTLVEDTDIDRDIVLSDIARRETSRRANALLLLAQRLAVIGT VPEFELEELPLGPYALCRIVRRCGETLGLSLDGQLTLYKVFERQVMDRLGDLFESANSALAQEGILPGLVYHPYLVKPTQ VQTRRAPPAAAPGSKDAAAMNKPGAGPRMPRPATGWAGQAAPTAWQSALLDPAAAPPALAIAPPALSPALSDAVQALGGL MASARQSQAAVHASHAGAGALAHHEVTAPSPTSLAAVAQASQHSAAAAVPKAALGDALASLQGALATQAAATPQASGIDA VQRQVLEVLRRQHGPDAALSPQDNDTFDLLGLLYAQMQREVREQAPAQALLAKLQVPVVRAALADAHFFVRDQHPVRELL NTVAESGAVWLGEDDADPHLLHKLGSAVDKIVNDYQGDEAVFAAANDDIQAHLRTLARKAEVAERRHVDAARGKERLESA KQQAESRIEQLCEQSAPPRFVQSLLRQAWSDVLTLTLLRQGEQSPEWDERQALTARIGEVTCRSKGQPIDIALGTEVETA LLQVGYHHDEAAAIARRLSTPGGEDEVTSRTELAAKLKARARLGDQGDSAPRKQAATPRTPAEEECYLQVRSLPFGTWFE FVVNQQGDLRRQRLSWYSPMTGNALFVNQRGQKVGEHSLDSLARLMAGGQARLVVEEKSRLIDRAWHATVRTLRSLAGQS PVAEAQP
Sequences:
>Translated_807_residues MSMHVSPIQPAVSGPIADAPVSARGRRLLGMLHAQCVQALGGPLRLTVVELERELLHQAEHARNSQIQAETYAQMRGLRD HIDRFPQAFLQELAQALASLRERPVLTPSTDTSAQTQMLTLVEDTDIDRDIVLSDIARRETSRRANALLLLAQRLAVIGT VPEFELEELPLGPYALCRIVRRCGETLGLSLDGQLTLYKVFERQVMDRLGDLFESANSALAQEGILPGLVYHPYLVKPTQ VQTRRAPPAAAPGSKDAAAMNKPGAGPRMPRPATGWAGQAAPTAWQSALLDPAAAPPALAIAPPALSPALSDAVQALGGL MASARQSQAAVHASHAGAGALAHHEVTAPSPTSLAAVAQASQHSAAAAVPKAALGDALASLQGALATQAAATPQASGIDA VQRQVLEVLRRQHGPDAALSPQDNDTFDLLGLLYAQMQREVREQAPAQALLAKLQVPVVRAALADAHFFVRDQHPVRELL NTVAESGAVWLGEDDADPHLLHKLGSAVDKIVNDYQGDEAVFAAANDDIQAHLRTLARKAEVAERRHVDAARGKERLESA KQQAESRIEQLCEQSAPPRFVQSLLRQAWSDVLTLTLLRQGEQSPEWDERQALTARIGEVTCRSKGQPIDIALGTEVETA LLQVGYHHDEAAAIARRLSTPGGEDEVTSRTELAAKLKARARLGDQGDSAPRKQAATPRTPAEEECYLQVRSLPFGTWFE FVVNQQGDLRRQRLSWYSPMTGNALFVNQRGQKVGEHSLDSLARLMAGGQARLVVEEKSRLIDRAWHATVRTLRSLAGQS PVAEAQP >Mature_806_residues SMHVSPIQPAVSGPIADAPVSARGRRLLGMLHAQCVQALGGPLRLTVVELERELLHQAEHARNSQIQAETYAQMRGLRDH IDRFPQAFLQELAQALASLRERPVLTPSTDTSAQTQMLTLVEDTDIDRDIVLSDIARRETSRRANALLLLAQRLAVIGTV PEFELEELPLGPYALCRIVRRCGETLGLSLDGQLTLYKVFERQVMDRLGDLFESANSALAQEGILPGLVYHPYLVKPTQV QTRRAPPAAAPGSKDAAAMNKPGAGPRMPRPATGWAGQAAPTAWQSALLDPAAAPPALAIAPPALSPALSDAVQALGGLM ASARQSQAAVHASHAGAGALAHHEVTAPSPTSLAAVAQASQHSAAAAVPKAALGDALASLQGALATQAAATPQASGIDAV QRQVLEVLRRQHGPDAALSPQDNDTFDLLGLLYAQMQREVREQAPAQALLAKLQVPVVRAALADAHFFVRDQHPVRELLN TVAESGAVWLGEDDADPHLLHKLGSAVDKIVNDYQGDEAVFAAANDDIQAHLRTLARKAEVAERRHVDAARGKERLESAK QQAESRIEQLCEQSAPPRFVQSLLRQAWSDVLTLTLLRQGEQSPEWDERQALTARIGEVTCRSKGQPIDIALGTEVETAL LQVGYHHDEAAAIARRLSTPGGEDEVTSRTELAAKLKARARLGDQGDSAPRKQAATPRTPAEEECYLQVRSLPFGTWFEF VVNQQGDLRRQRLSWYSPMTGNALFVNQRGQKVGEHSLDSLARLMAGGQARLVVEEKSRLIDRAWHATVRTLRSLAGQSP VAEAQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86948; Mature: 86817
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMHVSPIQPAVSGPIADAPVSARGRRLLGMLHAQCVQALGGPLRLTVVELERELLHQAE CCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHH HARNSQIQAETYAQMRGLRDHIDRFPQAFLQELAQALASLRERPVLTPSTDTSAQTQMLT HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEE LVEDTDIDRDIVLSDIARRETSRRANALLLLAQRLAVIGTVPEFELEELPLGPYALCRIV EHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHH RRCGETLGLSLDGQLTLYKVFERQVMDRLGDLFESANSALAQEGILPGLVYHPYLVKPTQ HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCEECCCCC VQTRRAPPAAAPGSKDAAAMNKPGAGPRMPRPATGWAGQAAPTAWQSALLDPAAAPPALA HHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEE IAPPALSPALSDAVQALGGLMASARQSQAAVHASHAGAGALAHHEVTAPSPTSLAAVAQA ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHH SQHSAAAAVPKAALGDALASLQGALATQAAATPQASGIDAVQRQVLEVLRRQHGPDAALS HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC PQDNDTFDLLGLLYAQMQREVREQAPAQALLAKLQVPVVRAALADAHFFVRDQHPVRELL CCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH NTVAESGAVWLGEDDADPHLLHKLGSAVDKIVNDYQGDEAVFAAANDDIQAHLRTLARKA HHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHH EVAERRHVDAARGKERLESAKQQAESRIEQLCEQSAPPRFVQSLLRQAWSDVLTLTLLRQ HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC GEQSPEWDERQALTARIGEVTCRSKGQPIDIALGTEVETALLQVGYHHDEAAAIARRLST CCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHCC PGGEDEVTSRTELAAKLKARARLGDQGDSAPRKQAATPRTPAEEECYLQVRSLPFGTWFE CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHCCCHHHHH FVVNQQGDLRRQRLSWYSPMTGNALFVNQRGQKVGEHSLDSLARLMAGGQARLVVEEKSR HHHCCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHH LIDRAWHATVRTLRSLAGQSPVAEAQP HHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SMHVSPIQPAVSGPIADAPVSARGRRLLGMLHAQCVQALGGPLRLTVVELERELLHQAE CCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHH HARNSQIQAETYAQMRGLRDHIDRFPQAFLQELAQALASLRERPVLTPSTDTSAQTQMLT HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEE LVEDTDIDRDIVLSDIARRETSRRANALLLLAQRLAVIGTVPEFELEELPLGPYALCRIV EHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHH RRCGETLGLSLDGQLTLYKVFERQVMDRLGDLFESANSALAQEGILPGLVYHPYLVKPTQ HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCEECCCCC VQTRRAPPAAAPGSKDAAAMNKPGAGPRMPRPATGWAGQAAPTAWQSALLDPAAAPPALA HHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEE IAPPALSPALSDAVQALGGLMASARQSQAAVHASHAGAGALAHHEVTAPSPTSLAAVAQA ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHH SQHSAAAAVPKAALGDALASLQGALATQAAATPQASGIDAVQRQVLEVLRRQHGPDAALS HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC PQDNDTFDLLGLLYAQMQREVREQAPAQALLAKLQVPVVRAALADAHFFVRDQHPVRELL CCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH NTVAESGAVWLGEDDADPHLLHKLGSAVDKIVNDYQGDEAVFAAANDDIQAHLRTLARKA HHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHH EVAERRHVDAARGKERLESAKQQAESRIEQLCEQSAPPRFVQSLLRQAWSDVLTLTLLRQ HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC GEQSPEWDERQALTARIGEVTCRSKGQPIDIALGTEVETALLQVGYHHDEAAAIARRLST CCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHCC PGGEDEVTSRTELAAKLKARARLGDQGDSAPRKQAATPRTPAEEECYLQVRSLPFGTWFE CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHCCCHHHHH FVVNQQGDLRRQRLSWYSPMTGNALFVNQRGQKVGEHSLDSLARLMAGGQARLVVEEKSR HHHCCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHH LIDRAWHATVRTLRSLAGQSPVAEAQP HHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA