| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 77748650
Identifier: 77748650
GI number: 77748650
Start: 2761552
End: 2762433
Strand: Reverse
Name: 77748650
Synonym: XAC2368
Alternate gene names: NA
Gene position: 2762433-2761552 (Counterclockwise)
Preceding gene: 21243103
Following gene: 21243101
Centisome position: 53.37
GC content: 63.72
Gene sequence:
>882_bases ATGCGCGTGCATCACCTCAATTGCATTTCCACCTGCCCGTTGGGCGGCCATCTTATGGACGGCCGTACGCCGGGCGTACT GGAACGCGGGCATCTGTGTTGCCATTGCTTGCTGGTGGAAACCAGCGCCGGGTTGGTCCTGATCGATACCGGTTTCGGCC TGCGCGATGTCGCGGAGCCACGCGCGCGTCTGAGTCGATTTTTTCTGGCGCTGGTCAAGCCAGACTTGCGCGAGGACATG ACCGCAATCCGGCAGATACAACGGCTCGGGCTGGATCCGCGCGATGTGCGGCACATCGTGCTGACCCATCTGGATTTCGA CCACGCCGGTGGGCTGGACGATTTTCCGCATGCGCGGGTGCATCTGATGACGAGCGAGCGCGATGCCGCACTGGCACAGC GCACCTGGATGGATCGCCAGCGCTTTCGTCCGCAACAGTGGTCTACGCGCGGGCAGTGGCGCACCTACGATGGCGCAGCA GGCGAGCACTGGATGGGGCTGGAGTGCGTGCGCGACCTGCATGGACTACCGCCAGAACTGCTGATGGTGCCGCTTCGCGG TCACACTCTGGGTCACGCCGCGGTTGCGGTGCATACGCCGGAGCGATGGCTGCTGCTGGCAGGTGATGCATATTTCTTCC ATCGCGAAATGGATGCAGATGCGCCTTACTGCACGCCAGGGCTGCGTGCTTACCAATGGATGTTGGAAAAGGACCGGGCC GCGCGCTTGACCAACCAGCAGCGTCTGCGCGCTCTACGGCAACAGCACGGCGGTGAGGTGGAAGTGTTCTGTTCGCACGA TGCAAGCGAGTTCGAGCGCGTTGCCGGGCAGCCGGCCCGTCTGCCGAGCGGCGCATTGCTGCACGCACCCACGCCACAGT GA
Upstream 100 bases:
>100_bases ACCGTCAAGGTGGCGTGTGCGCGCTGGTTGCGCGATCGGTACCGCTCACCGCTGTGCGACGGCCGCGTTGCAATGCTGGC CCGCCAAGCGGAGCGCGCCG
Downstream 100 bases:
>100_bases TCTGCGCTTCACCGCGCGCCAACGCACCGCAGCGCGATGATCTGCCACCGGCACAGCGCGCTTGCGTGATGACGCCATTC CAGGAGATCGAACATGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MRVHHLNCISTCPLGGHLMDGRTPGVLERGHLCCHCLLVETSAGLVLIDTGFGLRDVAEPRARLSRFFLALVKPDLREDM TAIRQIQRLGLDPRDVRHIVLTHLDFDHAGGLDDFPHARVHLMTSERDAALAQRTWMDRQRFRPQQWSTRGQWRTYDGAA GEHWMGLECVRDLHGLPPELLMVPLRGHTLGHAAVAVHTPERWLLLAGDAYFFHREMDADAPYCTPGLRAYQWMLEKDRA ARLTNQQRLRALRQQHGGEVEVFCSHDASEFERVAGQPARLPSGALLHAPTPQ
Sequences:
>Translated_293_residues MRVHHLNCISTCPLGGHLMDGRTPGVLERGHLCCHCLLVETSAGLVLIDTGFGLRDVAEPRARLSRFFLALVKPDLREDM TAIRQIQRLGLDPRDVRHIVLTHLDFDHAGGLDDFPHARVHLMTSERDAALAQRTWMDRQRFRPQQWSTRGQWRTYDGAA GEHWMGLECVRDLHGLPPELLMVPLRGHTLGHAAVAVHTPERWLLLAGDAYFFHREMDADAPYCTPGLRAYQWMLEKDRA ARLTNQQRLRALRQQHGGEVEVFCSHDASEFERVAGQPARLPSGALLHAPTPQ >Mature_293_residues MRVHHLNCISTCPLGGHLMDGRTPGVLERGHLCCHCLLVETSAGLVLIDTGFGLRDVAEPRARLSRFFLALVKPDLREDM TAIRQIQRLGLDPRDVRHIVLTHLDFDHAGGLDDFPHARVHLMTSERDAALAQRTWMDRQRFRPQQWSTRGQWRTYDGAA GEHWMGLECVRDLHGLPPELLMVPLRGHTLGHAAVAVHTPERWLLLAGDAYFFHREMDADAPYCTPGLRAYQWMLEKDRA ARLTNQQRLRALRQQHGGEVEVFCSHDASEFERVAGQPARLPSGALLHAPTPQ
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 33175; Mature: 33175
Theoretical pI: Translated: 7.49; Mature: 7.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVHHLNCISTCPLGGHLMDGRTPGVLERGHLCCHCLLVETSAGLVLIDTGFGLRDVAEP CCEEECCHHEECCCCCEECCCCCCCCHHCCCEEEEEEEEECCCCEEEEECCCCCHHHHHH RARLSRFFLALVKPDLREDMTAIRQIQRLGLDPRDVRHIVLTHLDFDHAGGLDDFPHARV HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHEEECCCCCCCCCCCCCCEE HLMTSERDAALAQRTWMDRQRFRPQQWSTRGQWRTYDGAAGEHWMGLECVRDLHGLPPEL EEEECCHHHHHHHHHHHHHHHCCCHHCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCHHH LMVPLRGHTLGHAAVAVHTPERWLLLAGDAYFFHREMDADAPYCTPGLRAYQWMLEKDRA EEEECCCCCCCCEEEEEECCCEEEEEECCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHH ARLTNQQRLRALRQQHGGEVEVFCSHDASEFERVAGQPARLPSGALLHAPTPQ HHHCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCCCCCCCCEECCCCCC >Mature Secondary Structure MRVHHLNCISTCPLGGHLMDGRTPGVLERGHLCCHCLLVETSAGLVLIDTGFGLRDVAEP CCEEECCHHEECCCCCEECCCCCCCCHHCCCEEEEEEEEECCCCEEEEECCCCCHHHHHH RARLSRFFLALVKPDLREDMTAIRQIQRLGLDPRDVRHIVLTHLDFDHAGGLDDFPHARV HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHEEECCCCCCCCCCCCCCEE HLMTSERDAALAQRTWMDRQRFRPQQWSTRGQWRTYDGAAGEHWMGLECVRDLHGLPPEL EEEECCHHHHHHHHHHHHHHHCCCHHCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCHHH LMVPLRGHTLGHAAVAVHTPERWLLLAGDAYFFHREMDADAPYCTPGLRAYQWMLEKDRA EEEECCCCCCCCEEEEEECCCEEEEEECCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHH ARLTNQQRLRALRQQHGGEVEVFCSHDASEFERVAGQPARLPSGALLHAPTPQ HHHCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCCCCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]