| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 77748634
Identifier: 77748634
GI number: 77748634
Start: 2540639
End: 2541766
Strand: Direct
Name: 77748634
Synonym: XAC2169
Alternate gene names: NA
Gene position: 2540639-2541766 (Clockwise)
Preceding gene: 21242903
Following gene: 21242905
Centisome position: 49.09
GC content: 63.39
Gene sequence:
>1128_bases ATGCTTCGTCACTCTTTGCGGGTGCGCCTGCTGTTGCCGGTGCTGGCCTTGGTGCTGGTCGTGGTGGTGGCACTGACGGT CATTTTGGCCATTACCGAAGCGAACCGGGTCAAGTTCGAAACCGGCGACGCGATCGAGCGCCAGTCGGTGTCCTTGCAGA CCTTGTTCGCGGTCACGCGCGCGATGATGCTCGACCGCGTCAATTCCTCCATGCGCCAGCTGCGCAGGGAAGCCAACAAG GAGGGCGCGCCCAGCATTGGCGGCGACGTCCGCGTTGCCGATCGCAGCGCCAACGACCTGCTGCTGGGCCAGCGCTCGCA GGCCAATGCCTTCACCTTGGTCGACGAGGTCACCGCCATCCACGAAGGTACCGCAACGCTGTTCTCGCGTACCGGCGACG ACTTCGTGCGTATCTCCACCAACGTCAAGAAGGACGACGGCAGCCGCGCCATCGGCACCGTGCTCGATCCGAACGGCCAG GCCGCCGCCAAGCTGCGTAACGGCGAAAGCTTCTACGGCGTGGTCGACATTCTCGGCAACCCGTACGTCACCGGCTACGA GCCGATCTTTGCCGGCAACGACAAGCGCGTGATCGGTGCGTGGTACGTCGGTTACAAGGCAGACACCCAGGCGCTGGAAA ACGTGGTCAGCAGCCGCCGCGTGCTCGACTCCGGTTTCATTGCCGTGTTCGACAGCAAGAACAAGCTGCGCTTCCAGTCC ACCACCGGCGCCACCACCGATACCGCCACCATCGAGCGGATCGTCAAGGACACCCCGGATGATTGGGTCGTCACCAAGGA ACAGGTACCCGATTGGGGCTTCACCCTGGTCTCGGCCTATCCCAGAAGCGACGTCAATGGCGTGATCGTGCGCCAGTCGC TGTGGATCGCCGGCATCGGTCTGCTGGTCTGCGCCTTGTTGCTCGGCCTGCAGTGGGCCCTGATCTGGAGCCGCGTGTTG CGCCCGATCCAGCACTTGACCACCGTGGCCGAAGAACTGAGCCTGGGCAAGTGGAACCACACCATCGCAGAGGTCAACCT CAAAGATGAAATCGGTACCCTGGCGCGCGCCATTTCCCGCTTGTCCAACAGCGTCCGGTTGGCCATGGAGCGCCTCAGCA AACGCTGA
Upstream 100 bases:
>100_bases TAGCATCTGGTTCGGCAGCCGATAACGGCTACGTCCAACCGTCGCACTGCGCTGCGGCGGCACTCGACTCAATCATTTAA ACGCGTTCAGGGGAATTGCG
Downstream 100 bases:
>100_bases GTCGCTGTCACCCATTCCGTACCTGATGCTGCAAGGAAGACGCCATGTCCACTGAATTCCGTCCGCTGATCGAGATCCTG CGCGAGCTCAAAGCGCTGGC
Product: methyl-accepting chemotaxis protein
Products: NA
Alternate protein names: Methyl-Accepting Chemotaxis Protein; Histidine Kinase; Methyl-Accepting Chemotaxis Protein Signaling Domain; Methyl-Accepting Chemotaxis Transmembrane Protein; Chemotaxis Sensory Transducer; Methyl-Accepting Chemotaxis Protein II; Methyl-Accepting Chemotaxis Protein McpA; Methyl-Accepting Chemotaxis Transducer; Diguanylate Cyclase With PAS/PAC Sensor; Methyl-Accepting Chemotaxis; Sensory Box/GGDEF Family Protein; MCP-Type Signal Transduction Protein
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MLRHSLRVRLLLPVLALVLVVVVALTVILAITEANRVKFETGDAIERQSVSLQTLFAVTRAMMLDRVNSSMRQLRREANK EGAPSIGGDVRVADRSANDLLLGQRSQANAFTLVDEVTAIHEGTATLFSRTGDDFVRISTNVKKDDGSRAIGTVLDPNGQ AAAKLRNGESFYGVVDILGNPYVTGYEPIFAGNDKRVIGAWYVGYKADTQALENVVSSRRVLDSGFIAVFDSKNKLRFQS TTGATTDTATIERIVKDTPDDWVVTKEQVPDWGFTLVSAYPRSDVNGVIVRQSLWIAGIGLLVCALLLGLQWALIWSRVL RPIQHLTTVAEELSLGKWNHTIAEVNLKDEIGTLARAISRLSNSVRLAMERLSKR
Sequences:
>Translated_375_residues MLRHSLRVRLLLPVLALVLVVVVALTVILAITEANRVKFETGDAIERQSVSLQTLFAVTRAMMLDRVNSSMRQLRREANK EGAPSIGGDVRVADRSANDLLLGQRSQANAFTLVDEVTAIHEGTATLFSRTGDDFVRISTNVKKDDGSRAIGTVLDPNGQ AAAKLRNGESFYGVVDILGNPYVTGYEPIFAGNDKRVIGAWYVGYKADTQALENVVSSRRVLDSGFIAVFDSKNKLRFQS TTGATTDTATIERIVKDTPDDWVVTKEQVPDWGFTLVSAYPRSDVNGVIVRQSLWIAGIGLLVCALLLGLQWALIWSRVL RPIQHLTTVAEELSLGKWNHTIAEVNLKDEIGTLARAISRLSNSVRLAMERLSKR >Mature_375_residues MLRHSLRVRLLLPVLALVLVVVVALTVILAITEANRVKFETGDAIERQSVSLQTLFAVTRAMMLDRVNSSMRQLRREANK EGAPSIGGDVRVADRSANDLLLGQRSQANAFTLVDEVTAIHEGTATLFSRTGDDFVRISTNVKKDDGSRAIGTVLDPNGQ AAAKLRNGESFYGVVDILGNPYVTGYEPIFAGNDKRVIGAWYVGYKADTQALENVVSSRRVLDSGFIAVFDSKNKLRFQS TTGATTDTATIERIVKDTPDDWVVTKEQVPDWGFTLVSAYPRSDVNGVIVRQSLWIAGIGLLVCALLLGLQWALIWSRVL RPIQHLTTVAEELSLGKWNHTIAEVNLKDEIGTLARAISRLSNSVRLAMERLSKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41215; Mature: 41215
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: PS50885 HAMP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRHSLRVRLLLPVLALVLVVVVALTVILAITEANRVKFETGDAIERQSVSLQTLFAVTR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHH AMMLDRVNSSMRQLRREANKEGAPSIGGDVRVADRSANDLLLGQRSQANAFTLVDEVTAI HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCEECCCCCCCHHHHHHHHHHH HEGTATLFSRTGDDFVRISTNVKKDDGSRAIGTVLDPNGQAAAKLRNGESFYGVVDILGN HCCHHHHHHCCCCCEEEEECCCCCCCCCCEECEEECCCCCCHHEECCCCCCEEHHHHCCC PYVTGYEPIFAGNDKRVIGAWYVGYKADTQALENVVSSRRVLDSGFIAVFDSKNKLRFQS CCCCCCCCEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEE TTGATTDTATIERIVKDTPDDWVVTKEQVPDWGFTLVSAYPRSDVNGVIVRQSLWIAGIG CCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEECCCCCCCCCEEEEHHHHHHHHH LLVCALLLGLQWALIWSRVLRPIQHLTTVAEELSLGKWNHTIAEVNLKDEIGTLARAISR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHH LSNSVRLAMERLSKR HHHHHHHHHHHHHCC >Mature Secondary Structure MLRHSLRVRLLLPVLALVLVVVVALTVILAITEANRVKFETGDAIERQSVSLQTLFAVTR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHH AMMLDRVNSSMRQLRREANKEGAPSIGGDVRVADRSANDLLLGQRSQANAFTLVDEVTAI HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCEECCCCCCCHHHHHHHHHHH HEGTATLFSRTGDDFVRISTNVKKDDGSRAIGTVLDPNGQAAAKLRNGESFYGVVDILGN HCCHHHHHHCCCCCEEEEECCCCCCCCCCEECEEECCCCCCHHEECCCCCCEEHHHHCCC PYVTGYEPIFAGNDKRVIGAWYVGYKADTQALENVVSSRRVLDSGFIAVFDSKNKLRFQS CCCCCCCCEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEE TTGATTDTATIERIVKDTPDDWVVTKEQVPDWGFTLVSAYPRSDVNGVIVRQSLWIAGIG CCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEECCCCCCCCCEEEEHHHHHHHHH LLVCALLLGLQWALIWSRVLRPIQHLTTVAEELSLGKWNHTIAEVNLKDEIGTLARAISR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHH LSNSVRLAMERLSKR HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA