| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 77748629
Identifier: 77748629
GI number: 77748629
Start: 2423066
End: 2423494
Strand: Direct
Name: 77748629
Synonym: XAC2073
Alternate gene names: NA
Gene position: 2423066-2423494 (Clockwise)
Preceding gene: 21242811
Following gene: 21242814
Centisome position: 46.82
GC content: 58.74
Gene sequence:
>429_bases GTGTGCGTCGTCCTCACGCAGGAGTGCGAAGATGGCAATCACGCGCCCTTTCGCCGTCAGCCACGCGTTCCACTGCCACT GCCCGATCGCCAGCGCCTGTACGTCGTTGGCAAATTGGGCATGCGCAAACGCCACTGCATCCGTACCGGCCAGTCGGACG TATTGCATGTCGTGCAGGGAGCCAAAACCCTGCGGAATAAGATTCAGGTTGTCAGCCACGGAAGGGGAGGACTAAAATCG CCAAGTTGTGAGAGCACTATGATAGGCCATCCAACCCCCACCCCAGCGCAGGATTCCGAGACGCAGCCTTCTTCTCAGGA GCATATTCCCGAGAAAAAGCCACTGCCGAAGGAGATTGGTGGGCGCGACGGCCCCGAGCCAACGCGCTACGGCGACTGGG AAAAAAATGGACGCTGCATCGATTTTTGA
Upstream 100 bases:
>100_bases ACAGCGTGGCAATACCGATTTTCAGCTTGCGGCGGAACACGAAACGGCTGAGTTGCGTGGCGATCTCGGCCGCGTTGCCG TCCGGCAACAGCATCAGTAA
Downstream 100 bases:
>100_bases GCAGCTTTTAGCCACAGCGGCCTAGTGCCGCCCAGCCGAGAAAACGAGCCCAGCGAATGGCGATCCGCGAACGTCCTCTC TCCCCGCATCTCCAGGTATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MCVVLTQECEDGNHAPFRRQPRVPLPLPDRQRLYVVGKLGMRKRHCIRTGQSDVLHVVQGAKTLRNKIQVVSHGRGGLKS PSCESTMIGHPTPTPAQDSETQPSSQEHIPEKKPLPKEIGGRDGPEPTRYGDWEKNGRCIDF
Sequences:
>Translated_142_residues MCVVLTQECEDGNHAPFRRQPRVPLPLPDRQRLYVVGKLGMRKRHCIRTGQSDVLHVVQGAKTLRNKIQVVSHGRGGLKS PSCESTMIGHPTPTPAQDSETQPSSQEHIPEKKPLPKEIGGRDGPEPTRYGDWEKNGRCIDF >Mature_142_residues MCVVLTQECEDGNHAPFRRQPRVPLPLPDRQRLYVVGKLGMRKRHCIRTGQSDVLHVVQGAKTLRNKIQVVSHGRGGLKS PSCESTMIGHPTPTPAQDSETQPSSQEHIPEKKPLPKEIGGRDGPEPTRYGDWEKNGRCIDF
Specific function: Unknown
COG id: COG5508
COG function: function code S; Uncharacterized conserved small protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15867; Mature: 15867
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCVVLTQECEDGNHAPFRRQPRVPLPLPDRQRLYVVGKLGMRKRHCIRTGQSDVLHVVQG CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHCCCHHHHHHHHH AKTLRNKIQVVSHGRGGLKSPSCESTMIGHPTPTPAQDSETQPSSQEHIPEKKPLPKEIG HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHC GRDGPEPTRYGDWEKNGRCIDF CCCCCCCCCCCCCCCCCEEECC >Mature Secondary Structure MCVVLTQECEDGNHAPFRRQPRVPLPLPDRQRLYVVGKLGMRKRHCIRTGQSDVLHVVQG CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHCCCHHHHHHHHH AKTLRNKIQVVSHGRGGLKSPSCESTMIGHPTPTPAQDSETQPSSQEHIPEKKPLPKEIG HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHC GRDGPEPTRYGDWEKNGRCIDF CCCCCCCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA