| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 77748607
Identifier: 77748607
GI number: 77748607
Start: 1972877
End: 1974385
Strand: Reverse
Name: 77748607
Synonym: XAC1713
Alternate gene names: NA
Gene position: 1974385-1972877 (Counterclockwise)
Preceding gene: 21242463
Following gene: 21242458
Centisome position: 38.15
GC content: 64.94
Gene sequence:
>1509_bases ATGCCCTTCTTTCTCCGCGCCGGCCTGCTGGCCTGTGTGCTACTCAGCGGGACGGCGCTGGCCGAAGCGCCAGACAAAGC CGATAAAAGCGATGCGCAAAGCGACGCCAAATCCGATGCCGCCGCCAAACAGGCGCCATTGCCGGCCGACGCCAGCGTGC GTCAGAACACGCGCGTGGCTGGCCGTAGCCTGAGCTATACCGCCACGGTCGGCACGCTGCCGGTACGCGATGCGCAGGGC AAGACCATGGGCGAGGTGGTATTCACCGCCTACACCGTCGATGGCAAGAACCGCCCGGTGACCTTCGCATTGAACGGTGG GCCGGGCGCCGCATCGGTGTATCTCAACATGGGCGCGATCGGGCCGAAGATCGTCGGTTTCGGCGCCGAAGGCGACAGTG CGTCGGCACCGGCCACACTGCGCGACAACCCGGGCACGTGGCTGGACTTCACCGACCTGGTCTTCATCGACCCGGTGGGC ACCGGCTTCAGCCGCGCGCTGATCGGCGACGACGATGCCAAGAAGCAGTTCTACAACCCGCAGGCGGACGTGGAATATCT CTCTCGGGTGATCTACGACTGGCTGCTCAAAAACCGCCGCCTGCAGGCGCGCAAATATCTGGTCGGGGAAAGCTATGGCG GATTCCGCGGCCCGCGCATCACCCACTACCTGCAGACGCAGCTGGGCGTGGCGATGAACGGCGTGGTGCTGGTGTCGCCG TACCTCAACCCGACCCTGGACGACAACGGCGATGTGTCGCCCCTGGCATGGATGCTGACGCTTCCCTCGATCGCTGCTGC GCACCTGGAGCGCCAGGGCCAGCTCAGCGACAGCGCGATGCGCCAGGTGATCGACTACACCCGCAGCGATTACGCGGTGG CGCTGATGAAAGGACGCACCGACCCGCAGGCTACCGAAGCGATGCTGCAGCAGGTCACCCGCATGACCGGGCTGGACCCG GCGTATGTGCGACGCTCCGGCGGGCGCCTGGAAACCCAGGCCTATCTGCGCGAGGTGTTTCGCGACAAGGGCGAATTGGG CAGCCGTTACGACTCCAACGTGACCGCCTTCGACCCGTTTCCCAACGATGCCGAACAACGCGCCAACGACCCGCTGCTGG ACAGCATCATTGCGCCCACCACCACCGCAATGGTGGACTTCGTGACCCGCGTGGTCGGCTGGAAGATCGATGCGCAGTAT CGCGCGCTCAACTACGACGTCAACAAGCTCTGGGACTGGAACGACGAGCTTCGCAAGGGCGCAGTGACCCAGCTGCGTCA ATCGGTGGCGATCGATCCGAAGTTGCGCGTGTTGATCGCGCACGGCTGGAACGACCTCTCCTGCCCGTTCATGGGTTCGG TCCTGACGGTGGACCAGATGCCGGCCATGGGCAGCGACAGCAAACGCGTGCAGGTGCGCGAATATCCGGGCGGCCACATG TTCTACAACCGTGCCGACAGCCAGGCCGCGTTCCGTAACGACGTCGAGGCGATGTACGAAACGCGCTGA
Upstream 100 bases:
>100_bases CAAGCCACATCGGTCGACGCGACACATATGCCTTTGTGCACATCCACCGAGTGCTGCCGGGGCCTAGCATCGGCACTCCC CTGCTTCCACATCGATGCCC
Downstream 100 bases:
>100_bases TTGCTCGCATCGCCGGGCGTGTGGACGCTCGGCGATGGATCAGCCGCGTCGTGCCGCGCTCAGACCGCGCCAGGGGCGGT CGCCTGCACGTTCCACCCCA
Product: carboxypeptidase-related protein
Products: NA
Alternate protein names: Serine Carboxypeptidase Family Protein; Carboxypeptidase-Related Protein; Serine Carboxypeptidase; Carboxypeptidase C; Serine-Type Carboxypeptidase Family Protein; S10 Family Peptidase; Carboxypeptidase; S10 Family Carboxypeptidase; Carboxypeptidase-Like Protein; Serine Carboxypeptidase Superfamily; Peptidase S
Number of amino acids: Translated: 502; Mature: 501
Protein sequence:
>502_residues MPFFLRAGLLACVLLSGTALAEAPDKADKSDAQSDAKSDAAAKQAPLPADASVRQNTRVAGRSLSYTATVGTLPVRDAQG KTMGEVVFTAYTVDGKNRPVTFALNGGPGAASVYLNMGAIGPKIVGFGAEGDSASAPATLRDNPGTWLDFTDLVFIDPVG TGFSRALIGDDDAKKQFYNPQADVEYLSRVIYDWLLKNRRLQARKYLVGESYGGFRGPRITHYLQTQLGVAMNGVVLVSP YLNPTLDDNGDVSPLAWMLTLPSIAAAHLERQGQLSDSAMRQVIDYTRSDYAVALMKGRTDPQATEAMLQQVTRMTGLDP AYVRRSGGRLETQAYLREVFRDKGELGSRYDSNVTAFDPFPNDAEQRANDPLLDSIIAPTTTAMVDFVTRVVGWKIDAQY RALNYDVNKLWDWNDELRKGAVTQLRQSVAIDPKLRVLIAHGWNDLSCPFMGSVLTVDQMPAMGSDSKRVQVREYPGGHM FYNRADSQAAFRNDVEAMYETR
Sequences:
>Translated_502_residues MPFFLRAGLLACVLLSGTALAEAPDKADKSDAQSDAKSDAAAKQAPLPADASVRQNTRVAGRSLSYTATVGTLPVRDAQG KTMGEVVFTAYTVDGKNRPVTFALNGGPGAASVYLNMGAIGPKIVGFGAEGDSASAPATLRDNPGTWLDFTDLVFIDPVG TGFSRALIGDDDAKKQFYNPQADVEYLSRVIYDWLLKNRRLQARKYLVGESYGGFRGPRITHYLQTQLGVAMNGVVLVSP YLNPTLDDNGDVSPLAWMLTLPSIAAAHLERQGQLSDSAMRQVIDYTRSDYAVALMKGRTDPQATEAMLQQVTRMTGLDP AYVRRSGGRLETQAYLREVFRDKGELGSRYDSNVTAFDPFPNDAEQRANDPLLDSIIAPTTTAMVDFVTRVVGWKIDAQY RALNYDVNKLWDWNDELRKGAVTQLRQSVAIDPKLRVLIAHGWNDLSCPFMGSVLTVDQMPAMGSDSKRVQVREYPGGHM FYNRADSQAAFRNDVEAMYETR >Mature_501_residues PFFLRAGLLACVLLSGTALAEAPDKADKSDAQSDAKSDAAAKQAPLPADASVRQNTRVAGRSLSYTATVGTLPVRDAQGK TMGEVVFTAYTVDGKNRPVTFALNGGPGAASVYLNMGAIGPKIVGFGAEGDSASAPATLRDNPGTWLDFTDLVFIDPVGT GFSRALIGDDDAKKQFYNPQADVEYLSRVIYDWLLKNRRLQARKYLVGESYGGFRGPRITHYLQTQLGVAMNGVVLVSPY LNPTLDDNGDVSPLAWMLTLPSIAAAHLERQGQLSDSAMRQVIDYTRSDYAVALMKGRTDPQATEAMLQQVTRMTGLDPA YVRRSGGRLETQAYLREVFRDKGELGSRYDSNVTAFDPFPNDAEQRANDPLLDSIIAPTTTAMVDFVTRVVGWKIDAQYR ALNYDVNKLWDWNDELRKGAVTQLRQSVAIDPKLRVLIAHGWNDLSCPFMGSVLTVDQMPAMGSDSKRVQVREYPGGHMF YNRADSQAAFRNDVEAMYETR
Specific function: Unknown
COG id: COG2939
COG function: function code E; Carboxypeptidase C (cathepsin A)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54998; Mature: 54866
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: PS00131 CARBOXYPEPT_SER_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFFLRAGLLACVLLSGTALAEAPDKADKSDAQSDAKSDAAAKQAPLPADASVRQNTRVA CCHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHC GRSLSYTATVGTLPVRDAQGKTMGEVVFTAYTVDGKNRPVTFALNGGPGAASVYLNMGAI CCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEECCCCCCEEEEEECCCC GPKIVGFGAEGDSASAPATLRDNPGTWLDFTDLVFIDPVGTGFSRALIGDDDAKKQFYNP CCEEEEECCCCCCCCCCEEEECCCCCEEECCCEEEECCCCCCCCEEECCCCHHHHHHCCC QADVEYLSRVIYDWLLKNRRLQARKYLVGESYGGFRGPRITHYLQTQLGVAMNGVVLVSP CHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHEECCEEEEEC YLNPTLDDNGDVSPLAWMLTLPSIAAAHLERQGQLSDSAMRQVIDYTRSDYAVALMKGRT CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCC DPQATEAMLQQVTRMTGLDPAYVRRSGGRLETQAYLREVFRDKGELGSRYDSNVTAFDPF CHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCC PNDAEQRANDPLLDSIIAPTTTAMVDFVTRVVGWKIDAQYRALNYDVNKLWDWNDELRKG CCCHHHHCCCCHHHHHHCCHHHHHHHHHHHHHCEEECCEEEEECCCHHHHCCCCHHHHHH AVTQLRQSVAIDPKLRVLIAHGWNDLSCPFMGSVLTVDQMPAMGSDSKRVQVREYPGGHM HHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCEEEHHCCCCCCCCCCEEEEEECCCCCE FYNRADSQAAFRNDVEAMYETR EEECCCCHHHHHHHHHHHHCCC >Mature Secondary Structure PFFLRAGLLACVLLSGTALAEAPDKADKSDAQSDAKSDAAAKQAPLPADASVRQNTRVA CHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHC GRSLSYTATVGTLPVRDAQGKTMGEVVFTAYTVDGKNRPVTFALNGGPGAASVYLNMGAI CCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEECCCCCCEEEEEECCCC GPKIVGFGAEGDSASAPATLRDNPGTWLDFTDLVFIDPVGTGFSRALIGDDDAKKQFYNP CCEEEEECCCCCCCCCCEEEECCCCCEEECCCEEEECCCCCCCCEEECCCCHHHHHHCCC QADVEYLSRVIYDWLLKNRRLQARKYLVGESYGGFRGPRITHYLQTQLGVAMNGVVLVSP CHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHEECCEEEEEC YLNPTLDDNGDVSPLAWMLTLPSIAAAHLERQGQLSDSAMRQVIDYTRSDYAVALMKGRT CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCC DPQATEAMLQQVTRMTGLDPAYVRRSGGRLETQAYLREVFRDKGELGSRYDSNVTAFDPF CHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCC PNDAEQRANDPLLDSIIAPTTTAMVDFVTRVVGWKIDAQYRALNYDVNKLWDWNDELRKG CCCHHHHCCCCHHHHHHCCHHHHHHHHHHHHHCEEECCEEEEECCCHHHHCCCCHHHHHH AVTQLRQSVAIDPKLRVLIAHGWNDLSCPFMGSVLTVDQMPAMGSDSKRVQVREYPGGHM HHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCEEEHHCCCCCCCCCCEEEEEECCCCCE FYNRADSQAAFRNDVEAMYETR EEECCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA