| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is yuxL [H]
Identifier: 77748567
GI number: 77748567
Start: 1375738
End: 1377858
Strand: Direct
Name: yuxL [H]
Synonym: XAC1204
Alternate gene names: 77748567
Gene position: 1375738-1377858 (Clockwise)
Preceding gene: 21241957
Following gene: 77748568
Centisome position: 26.58
GC content: 64.78
Gene sequence:
>2121_bases ATGAAGCTGCGTCACGCCGTATTGCCCCTGTGTCTGCTGGCTGCCCTGCCAAGCCTTGCCGCCGCGCGCGGTTTCGATGT GCGCGACATGGTGGCGCTGGACCGGGTGTCCTCGCCCACGCTCACGCCCGATGGCAGCAGCGTGCTGTTCGCCAAGCGCC AGGCCAAGACCGCCAATGGCAAGCCGGCCACCAGCCTGTGGGTGCGCAATCTGCGCACCCGCGATTTGTCGCCGCCCAAG CGGCTCACCCCGGAAGGATGGAACGTCAACAGCCCGGCGTTGTCGCCGGACGGCAAGACGGTGTACTTCCTCAGCAGCAA ATCCGGTAGCCAGCAGCTCTACGCGCAGCCGATGGCCGGCGGCACCCCGCAGCAACTCACCGCATTTGCAGTAGACGTGG ACAGCTACAAGCTCTCGCCGGGCGGCAAGCGCATCGCCTTCAGCGCGGGCGTGTTCCAGGACTGCGGCTCTGACCTGGGC TGCACCAAGAAGAAGCTGGGCGAGCGCAAGAATAACAAGGCCAGCGGCGTGATCTACGACCAGTTGTTCGTGCGTCATTG GGACACCTGGAACGATGGCCGCCGCAATACCTTGTTCGTCGCCGAGTTGCCTGCGGCCGGTGCCAAGGCAGTGGTCGGGG CGTCGGCGATCAGCGCCACGTTGGCCGGCGACGCGCCGTCCAAGCCGTTCGGTGGCAACGACGATTACACCTGGTCGCCG GATGGCAGCAGCGTGGTGGCCAGCGTGCGCATTCCGCAGCCGCATGGCCCGGAAGCAGGCAAGAACGCCAAGGCCAGCGG CAAGCCCACCGGTAACGACGAGCCGTGGCAGACCAACTTCGATCTGTACCGCCTGGATGCGACCGGCAAGTCCGCGCCGG TCAACCTGACCGCGGCCAACCCGGCCTGGGATGCCGGCCCGGTGTTCAGTACCGACGGCAAGACCCTGTACTACCGCGCC ATGAAGCGCCCGGGTTTCGAGGCCGACCGCTTCGGCCTGATGGCGATGGATGTGGCCAGCGGCAAGACCCGCGAGATCGC GCCGAAGTGGGACCGCTCGGCCGGCGAAATCGTGCTGAGCGACGACGGCAGCAGCCTGTACACCAGTGCCGACGATCTCG GCGAGCATCCGCTGTTCAAGATCGATATCGCCAGCGGCGAGGCCGCCAAGCTGGTGGGCGAGGGCAGCGTGCACGCCCCG ACGCTGGCCGGCAATACGCTGGCGTTTACGCGCAGCTCGCTCAAGAGTGGCGACCAGGTCTTCGTCAGCGACACGCAAGG CCAGGGCCTGCGTGCGATCAGCCAGAGCGCCGGCGAACTGCTGCCAGAGGTGCAGTTCGGCGACTACGAACAGTTCCAGT TCAAGGGCTGGAACAACGACACCGTGCATGGCTACGTGGTCAAGCCGTACAACTACCAGGAAGGCAAGACGTACCCGGTG GCGTTCCTCATCCACGGCGGCCCGCAGGGCAGCTTTGGCAATGGCTGGAGCAACCGTTGGAATCCGCAGACCTACGCCGG CCAGGGCTACGCGGTGGTCATGATCGACTTCCACGGCTCTACCGGCTACGGCCAGGAATTCACCGACGCCATCAGCCAGC ATTGGGGCGACCGCCCGCTGGAGGATCTGCAAAAAGGCTGGGCCGCCGCGCAGAAGCAATACGGCTTCCTCAACGGCGAC AAGGCCTGCGCATTGGGCGCCAGCTATGGCGGCTACATGGTCTATTGGATGGCCGGCAACTGGAATCAACCATGGAAGTG CCTGGTCGACCACGACGGCGTGTTCGACAACCGCACCATGGGCTACGCCACCGAGGAATTGTGGTTCAGCGAGTGGGAAA ACGGCGGCACGCCGTGGCAGAACCCGGCCGGCTACGAGAAGTTCAACCCGGTGCTGCACGTAGACAACTGGAAGGTGCCG ATGCTGGTCATCCACGGTCAGCAGGATTTCCGCATTCCGGTCGAACAAGGCCTGGCCGCCTTCACCGCGCTGCAGCGCAA GGGCATCGATTCCAAGTTCCTGTATTTCCCGGACGAGAACCACTGGGTGCTCAAGCCGGATAACAGCGTCTTGTGGCATG ACACCGTCAACAGCTGGCTGAAGCAGCATATCGGTCAGTGA
Upstream 100 bases:
>100_bases CGCGCGCGGCGCACCACGTCGTGCACGCATGACCTCCTGCCTTTGCGCGTGCGCCGCAGCAACGCCTACCATCGACGTTT TGCCGTTGCCGGAGAGCTCG
Downstream 100 bases:
>100_bases CGGACGACCGACACGCCGCCAGGCGCGGCGTGTCGGTTGCTTGAGCGAATGCGTTCTCTGGGCGATGGGCGCTGTCGACG TCACCGTTTCGGCAAGCGAA
Product: alanyl dipeptidyl peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 706; Mature: 706
Protein sequence:
>706_residues MKLRHAVLPLCLLAALPSLAAARGFDVRDMVALDRVSSPTLTPDGSSVLFAKRQAKTANGKPATSLWVRNLRTRDLSPPK RLTPEGWNVNSPALSPDGKTVYFLSSKSGSQQLYAQPMAGGTPQQLTAFAVDVDSYKLSPGGKRIAFSAGVFQDCGSDLG CTKKKLGERKNNKASGVIYDQLFVRHWDTWNDGRRNTLFVAELPAAGAKAVVGASAISATLAGDAPSKPFGGNDDYTWSP DGSSVVASVRIPQPHGPEAGKNAKASGKPTGNDEPWQTNFDLYRLDATGKSAPVNLTAANPAWDAGPVFSTDGKTLYYRA MKRPGFEADRFGLMAMDVASGKTREIAPKWDRSAGEIVLSDDGSSLYTSADDLGEHPLFKIDIASGEAAKLVGEGSVHAP TLAGNTLAFTRSSLKSGDQVFVSDTQGQGLRAISQSAGELLPEVQFGDYEQFQFKGWNNDTVHGYVVKPYNYQEGKTYPV AFLIHGGPQGSFGNGWSNRWNPQTYAGQGYAVVMIDFHGSTGYGQEFTDAISQHWGDRPLEDLQKGWAAAQKQYGFLNGD KACALGASYGGYMVYWMAGNWNQPWKCLVDHDGVFDNRTMGYATEELWFSEWENGGTPWQNPAGYEKFNPVLHVDNWKVP MLVIHGQQDFRIPVEQGLAAFTALQRKGIDSKFLYFPDENHWVLKPDNSVLWHDTVNSWLKQHIGQ
Sequences:
>Translated_706_residues MKLRHAVLPLCLLAALPSLAAARGFDVRDMVALDRVSSPTLTPDGSSVLFAKRQAKTANGKPATSLWVRNLRTRDLSPPK RLTPEGWNVNSPALSPDGKTVYFLSSKSGSQQLYAQPMAGGTPQQLTAFAVDVDSYKLSPGGKRIAFSAGVFQDCGSDLG CTKKKLGERKNNKASGVIYDQLFVRHWDTWNDGRRNTLFVAELPAAGAKAVVGASAISATLAGDAPSKPFGGNDDYTWSP DGSSVVASVRIPQPHGPEAGKNAKASGKPTGNDEPWQTNFDLYRLDATGKSAPVNLTAANPAWDAGPVFSTDGKTLYYRA MKRPGFEADRFGLMAMDVASGKTREIAPKWDRSAGEIVLSDDGSSLYTSADDLGEHPLFKIDIASGEAAKLVGEGSVHAP TLAGNTLAFTRSSLKSGDQVFVSDTQGQGLRAISQSAGELLPEVQFGDYEQFQFKGWNNDTVHGYVVKPYNYQEGKTYPV AFLIHGGPQGSFGNGWSNRWNPQTYAGQGYAVVMIDFHGSTGYGQEFTDAISQHWGDRPLEDLQKGWAAAQKQYGFLNGD KACALGASYGGYMVYWMAGNWNQPWKCLVDHDGVFDNRTMGYATEELWFSEWENGGTPWQNPAGYEKFNPVLHVDNWKVP MLVIHGQQDFRIPVEQGLAAFTALQRKGIDSKFLYFPDENHWVLKPDNSVLWHDTVNSWLKQHIGQ >Mature_706_residues MKLRHAVLPLCLLAALPSLAAARGFDVRDMVALDRVSSPTLTPDGSSVLFAKRQAKTANGKPATSLWVRNLRTRDLSPPK RLTPEGWNVNSPALSPDGKTVYFLSSKSGSQQLYAQPMAGGTPQQLTAFAVDVDSYKLSPGGKRIAFSAGVFQDCGSDLG CTKKKLGERKNNKASGVIYDQLFVRHWDTWNDGRRNTLFVAELPAAGAKAVVGASAISATLAGDAPSKPFGGNDDYTWSP DGSSVVASVRIPQPHGPEAGKNAKASGKPTGNDEPWQTNFDLYRLDATGKSAPVNLTAANPAWDAGPVFSTDGKTLYYRA MKRPGFEADRFGLMAMDVASGKTREIAPKWDRSAGEIVLSDDGSSLYTSADDLGEHPLFKIDIASGEAAKLVGEGSVHAP TLAGNTLAFTRSSLKSGDQVFVSDTQGQGLRAISQSAGELLPEVQFGDYEQFQFKGWNNDTVHGYVVKPYNYQEGKTYPV AFLIHGGPQGSFGNGWSNRWNPQTYAGQGYAVVMIDFHGSTGYGQEFTDAISQHWGDRPLEDLQKGWAAAQKQYGFLNGD KACALGASYGGYMVYWMAGNWNQPWKCLVDHDGVFDNRTMGYATEELWFSEWENGGTPWQNPAGYEKFNPVLHVDNWKVP MLVIHGQQDFRIPVEQGLAAFTALQRKGIDSKFLYFPDENHWVLKPDNSVLWHDTVNSWLKQHIGQ
Specific function: Unknown
COG id: COG1506
COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S9B family [H]
Homologues:
Organism=Homo sapiens, GI23510451, Length=296, Percent_Identity=21.6216216216216, Blast_Score=97, Evalue=4e-20, Organism=Homo sapiens, GI194394146, Length=382, Percent_Identity=25.6544502617801, Blast_Score=95, Evalue=3e-19, Organism=Homo sapiens, GI18450280, Length=268, Percent_Identity=25.7462686567164, Blast_Score=84, Evalue=5e-16, Organism=Homo sapiens, GI37577089, Length=268, Percent_Identity=25.7462686567164, Blast_Score=84, Evalue=6e-16, Organism=Caenorhabditis elegans, GI25149159, Length=254, Percent_Identity=26.7716535433071, Blast_Score=97, Evalue=4e-20, Organism=Caenorhabditis elegans, GI25144537, Length=235, Percent_Identity=28.0851063829787, Blast_Score=96, Evalue=9e-20, Organism=Caenorhabditis elegans, GI25144540, Length=235, Percent_Identity=28.0851063829787, Blast_Score=95, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17552908, Length=205, Percent_Identity=27.8048780487805, Blast_Score=92, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17508017, Length=260, Percent_Identity=23.8461538461538, Blast_Score=77, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17508019, Length=260, Percent_Identity=23.8461538461538, Blast_Score=77, Evalue=5e-14, Organism=Drosophila melanogaster, GI45551969, Length=237, Percent_Identity=26.1603375527426, Blast_Score=76, Evalue=7e-14, Organism=Drosophila melanogaster, GI45550825, Length=237, Percent_Identity=26.1603375527426, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI45553511, Length=237, Percent_Identity=26.1603375527426, Blast_Score=75, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR011659 - InterPro: IPR001375 [H]
Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]
EC number: NA
Molecular weight: Translated: 76990; Mature: 76990
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLRHAVLPLCLLAALPSLAAARGFDVRDMVALDRVSSPTLTPDGSSVLFAKRQAKTANG CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCC KPATSLWVRNLRTRDLSPPKRLTPEGWNVNSPALSPDGKTVYFLSSKSGSQQLYAQPMAG CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCC GTPQQLTAFAVDVDSYKLSPGGKRIAFSAGVFQDCGSDLGCTKKKLGERKNNKASGVIYD CCHHHEEEEEEEECCEEECCCCCEEEEECCCHHHCCCCCCCCHHHHCCCCCCCCCCEEHH QLFVRHWDTWNDGRRNTLFVAELPAAGAKAVVGASAISATLAGDAPSKPFGGNDDYTWSP HHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHEEECCCCCCCCCCCCCCEEECC DGSSVVASVRIPQPHGPEAGKNAKASGKPTGNDEPWQTNFDLYRLDATGKSAPVNLTAAN CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECC PAWDAGPVFSTDGKTLYYRAMKRPGFEADRFGLMAMDVASGKTREIAPKWDRSAGEIVLS CCCCCCCEEECCCCEEEEEECCCCCCCCHHCCEEEEEECCCCCCCCCCCCCCCCCEEEEE DDGSSLYTSADDLGEHPLFKIDIASGEAAKLVGEGSVHAPTLAGNTLAFTRSSLKSGDQV CCCCEEEECHHHHCCCCEEEEEECCCCEEEEEECCCCCCCEECCCEEEEEHHHHCCCCEE FVSDTQGQGLRAISQSAGELLPEVQFGDYEQFQFKGWNNDTVHGYVVKPYNYQEGKTYPV EEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEECCEECCCCCEEEE AFLIHGGPQGSFGNGWSNRWNPQTYAGQGYAVVMIDFHGSTGYGQEFTDAISQHWGDRPL EEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCH EDLQKGWAAAQKQYGFLNGDKACALGASYGGYMVYWMAGNWNQPWKCLVDHDGVFDNRTM HHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCC GYATEELWFSEWENGGTPWQNPAGYEKFNPVLHVDNWKVPMLVIHGQQDFRIPVEQGLAA CCCHHHHHHHHHCCCCCCCCCCCCHHHCCCEEEECCCCEEEEEEECCCCCCCCHHHHHHH FTALQRKGIDSKFLYFPDENHWVLKPDNSVLWHDTVNSWLKQHIGQ HHHHHHCCCCCEEEEECCCCEEEECCCCCEEEHHHHHHHHHHHHCC >Mature Secondary Structure MKLRHAVLPLCLLAALPSLAAARGFDVRDMVALDRVSSPTLTPDGSSVLFAKRQAKTANG CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCC KPATSLWVRNLRTRDLSPPKRLTPEGWNVNSPALSPDGKTVYFLSSKSGSQQLYAQPMAG CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCC GTPQQLTAFAVDVDSYKLSPGGKRIAFSAGVFQDCGSDLGCTKKKLGERKNNKASGVIYD CCHHHEEEEEEEECCEEECCCCCEEEEECCCHHHCCCCCCCCHHHHCCCCCCCCCCEEHH QLFVRHWDTWNDGRRNTLFVAELPAAGAKAVVGASAISATLAGDAPSKPFGGNDDYTWSP HHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHEEECCCCCCCCCCCCCCEEECC DGSSVVASVRIPQPHGPEAGKNAKASGKPTGNDEPWQTNFDLYRLDATGKSAPVNLTAAN CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECC PAWDAGPVFSTDGKTLYYRAMKRPGFEADRFGLMAMDVASGKTREIAPKWDRSAGEIVLS CCCCCCCEEECCCCEEEEEECCCCCCCCHHCCEEEEEECCCCCCCCCCCCCCCCCEEEEE DDGSSLYTSADDLGEHPLFKIDIASGEAAKLVGEGSVHAPTLAGNTLAFTRSSLKSGDQV CCCCEEEECHHHHCCCCEEEEEECCCCEEEEEECCCCCCCEECCCEEEEEHHHHCCCCEE FVSDTQGQGLRAISQSAGELLPEVQFGDYEQFQFKGWNNDTVHGYVVKPYNYQEGKTYPV EEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEECCEECCCCCEEEE AFLIHGGPQGSFGNGWSNRWNPQTYAGQGYAVVMIDFHGSTGYGQEFTDAISQHWGDRPL EEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCH EDLQKGWAAAQKQYGFLNGDKACALGASYGGYMVYWMAGNWNQPWKCLVDHDGVFDNRTM HHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCC GYATEELWFSEWENGGTPWQNPAGYEKFNPVLHVDNWKVPMLVIHGQQDFRIPVEQGLAA CCCHHHHHHHHHCCCCCCCCCCCCHHHCCCEEEECCCCEEEEEEECCCCCCCCHHHHHHH FTALQRKGIDSKFLYFPDENHWVLKPDNSVLWHDTVNSWLKQHIGQ HHHHHHCCCCCEEEEECCCCEEEECCCCCEEEHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 3098560 [H]