Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

Click here to switch to the map view.

The map label for this gene is 77748564

Identifier: 77748564

GI number: 77748564

Start: 1334158

End: 1334904

Strand: Direct

Name: 77748564

Synonym: XAC1172

Alternate gene names: NA

Gene position: 1334158-1334904 (Clockwise)

Preceding gene: 21241924

Following gene: 21241928

Centisome position: 25.78

GC content: 66.8

Gene sequence:

>747_bases
ATGCGACCTTTAGCATTGACGTCCGCCACGCGCCGAGGCGCCAGGCGCGAGCAGCAAGAGGGCGCGACCGTGGCAGACGC
CGGCCCGTCTGCACCGGCCAGCGACCCGCACGCCAACACGCAATTGGCCCAGAACCTGCCGCGGCGGCCCGTGCGCGAGG
CGCCGCTGAGAGCGCCTGGCACGCCGCATGGCGCCCACCTCGCCAATGTGGGACGCTCGATCGCATATGTGGGCGCCGCC
GGGGCCGCACTCTGCGGAGGGTTTGCGGCCCTCCAGGCACCTGCCGCGGCGGCATACGGCTATCTCAACGATGATCTGTA
TTACAAGAATCTCGCTGTGGTCAGTAGCTGCCAGGCAGTAGGAGCGCTGGCCGCATTCCTGGGGATGAGGCTGGCCGATG
TGATGGCCGCTCGCTACGTGGAGGCGCAAGCTCGGTGGTACGAAGTGCCGACGAAGGCGCAGCGGGCAAGCGAGTTGGGA
ACAACCGAGGCCTGCCTGGATGAGGCGGTCGACATGGTGACCATATTCGACGCCGACCATCCTGGGCCTGCCATGGACGG
AGGCGAGCAGCTGGTATTGGCCACGGATCTGCTGCACCTCATGACGGTGGAGCGTTCTCGCTTGCCGCCGGAATTGTGGC
AAGCGGCCAGCGGTGTTGGCGACGATGCGCACAGGTTGGTCACCCAGCTTTTGCAGGCAGCCAGAGCCCGTGCAGCGGAT
GAAGCGTCGACGTCGTCGGCAGACTGA

Upstream 100 bases:

>100_bases
GCGCCGCTTGTTTCGTGTTCGGCAATGGTTTTTCGGCCGGATGCGTCATGCTCGATCATGCTGGGGAACAATGGTGGGCA
TCGATCGCGGAGAGGTGACC

Downstream 100 bases:

>100_bases
GTGAGCGCTGGCAAATGGCGGGAGCATGCGGCCCGCAATCGCGAGCCGGTGCTGCTTGAGGATTACAGCGGCGCCGACTT
GAGGATGCCCGACAAACTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MRPLALTSATRRGARREQQEGATVADAGPSAPASDPHANTQLAQNLPRRPVREAPLRAPGTPHGAHLANVGRSIAYVGAA
GAALCGGFAALQAPAAAAYGYLNDDLYYKNLAVVSSCQAVGALAAFLGMRLADVMAARYVEAQARWYEVPTKAQRASELG
TTEACLDEAVDMVTIFDADHPGPAMDGGEQLVLATDLLHLMTVERSRLPPELWQAASGVGDDAHRLVTQLLQAARARAAD
EASTSSAD

Sequences:

>Translated_248_residues
MRPLALTSATRRGARREQQEGATVADAGPSAPASDPHANTQLAQNLPRRPVREAPLRAPGTPHGAHLANVGRSIAYVGAA
GAALCGGFAALQAPAAAAYGYLNDDLYYKNLAVVSSCQAVGALAAFLGMRLADVMAARYVEAQARWYEVPTKAQRASELG
TTEACLDEAVDMVTIFDADHPGPAMDGGEQLVLATDLLHLMTVERSRLPPELWQAASGVGDDAHRLVTQLLQAARARAAD
EASTSSAD
>Mature_248_residues
MRPLALTSATRRGARREQQEGATVADAGPSAPASDPHANTQLAQNLPRRPVREAPLRAPGTPHGAHLANVGRSIAYVGAA
GAALCGGFAALQAPAAAAYGYLNDDLYYKNLAVVSSCQAVGALAAFLGMRLADVMAARYVEAQARWYEVPTKAQRASELG
TTEACLDEAVDMVTIFDADHPGPAMDGGEQLVLATDLLHLMTVERSRLPPELWQAASGVGDDAHRLVTQLLQAARARAAD
EASTSSAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25923; Mature: 25923

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPLALTSATRRGARREQQEGATVADAGPSAPASDPHANTQLAQNLPRRPVREAPLRAPG
CCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHCCCCCHHHCCCCCCC
TPHGAHLANVGRSIAYVGAAGAALCGGFAALQAPAAAAYGYLNDDLYYKNLAVVSSCQAV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
GALAAFLGMRLADVMAARYVEAQARWYEVPTKAQRASELGTTEACLDEAVDMVTIFDADH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHEEEEECCCC
PGPAMDGGEQLVLATDLLHLMTVERSRLPPELWQAASGVGDDAHRLVTQLLQAARARAAD
CCCCCCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
EASTSSAD
HCCCCCCC
>Mature Secondary Structure
MRPLALTSATRRGARREQQEGATVADAGPSAPASDPHANTQLAQNLPRRPVREAPLRAPG
CCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHCCCCCHHHCCCCCCC
TPHGAHLANVGRSIAYVGAAGAALCGGFAALQAPAAAAYGYLNDDLYYKNLAVVSSCQAV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
GALAAFLGMRLADVMAARYVEAQARWYEVPTKAQRASELGTTEACLDEAVDMVTIFDADH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHEEEEECCCC
PGPAMDGGEQLVLATDLLHLMTVERSRLPPELWQAASGVGDDAHRLVTQLLQAARARAAD
CCCCCCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
EASTSSAD
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA