| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 77748564
Identifier: 77748564
GI number: 77748564
Start: 1334158
End: 1334904
Strand: Direct
Name: 77748564
Synonym: XAC1172
Alternate gene names: NA
Gene position: 1334158-1334904 (Clockwise)
Preceding gene: 21241924
Following gene: 21241928
Centisome position: 25.78
GC content: 66.8
Gene sequence:
>747_bases ATGCGACCTTTAGCATTGACGTCCGCCACGCGCCGAGGCGCCAGGCGCGAGCAGCAAGAGGGCGCGACCGTGGCAGACGC CGGCCCGTCTGCACCGGCCAGCGACCCGCACGCCAACACGCAATTGGCCCAGAACCTGCCGCGGCGGCCCGTGCGCGAGG CGCCGCTGAGAGCGCCTGGCACGCCGCATGGCGCCCACCTCGCCAATGTGGGACGCTCGATCGCATATGTGGGCGCCGCC GGGGCCGCACTCTGCGGAGGGTTTGCGGCCCTCCAGGCACCTGCCGCGGCGGCATACGGCTATCTCAACGATGATCTGTA TTACAAGAATCTCGCTGTGGTCAGTAGCTGCCAGGCAGTAGGAGCGCTGGCCGCATTCCTGGGGATGAGGCTGGCCGATG TGATGGCCGCTCGCTACGTGGAGGCGCAAGCTCGGTGGTACGAAGTGCCGACGAAGGCGCAGCGGGCAAGCGAGTTGGGA ACAACCGAGGCCTGCCTGGATGAGGCGGTCGACATGGTGACCATATTCGACGCCGACCATCCTGGGCCTGCCATGGACGG AGGCGAGCAGCTGGTATTGGCCACGGATCTGCTGCACCTCATGACGGTGGAGCGTTCTCGCTTGCCGCCGGAATTGTGGC AAGCGGCCAGCGGTGTTGGCGACGATGCGCACAGGTTGGTCACCCAGCTTTTGCAGGCAGCCAGAGCCCGTGCAGCGGAT GAAGCGTCGACGTCGTCGGCAGACTGA
Upstream 100 bases:
>100_bases GCGCCGCTTGTTTCGTGTTCGGCAATGGTTTTTCGGCCGGATGCGTCATGCTCGATCATGCTGGGGAACAATGGTGGGCA TCGATCGCGGAGAGGTGACC
Downstream 100 bases:
>100_bases GTGAGCGCTGGCAAATGGCGGGAGCATGCGGCCCGCAATCGCGAGCCGGTGCTGCTTGAGGATTACAGCGGCGCCGACTT GAGGATGCCCGACAAACTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MRPLALTSATRRGARREQQEGATVADAGPSAPASDPHANTQLAQNLPRRPVREAPLRAPGTPHGAHLANVGRSIAYVGAA GAALCGGFAALQAPAAAAYGYLNDDLYYKNLAVVSSCQAVGALAAFLGMRLADVMAARYVEAQARWYEVPTKAQRASELG TTEACLDEAVDMVTIFDADHPGPAMDGGEQLVLATDLLHLMTVERSRLPPELWQAASGVGDDAHRLVTQLLQAARARAAD EASTSSAD
Sequences:
>Translated_248_residues MRPLALTSATRRGARREQQEGATVADAGPSAPASDPHANTQLAQNLPRRPVREAPLRAPGTPHGAHLANVGRSIAYVGAA GAALCGGFAALQAPAAAAYGYLNDDLYYKNLAVVSSCQAVGALAAFLGMRLADVMAARYVEAQARWYEVPTKAQRASELG TTEACLDEAVDMVTIFDADHPGPAMDGGEQLVLATDLLHLMTVERSRLPPELWQAASGVGDDAHRLVTQLLQAARARAAD EASTSSAD >Mature_248_residues MRPLALTSATRRGARREQQEGATVADAGPSAPASDPHANTQLAQNLPRRPVREAPLRAPGTPHGAHLANVGRSIAYVGAA GAALCGGFAALQAPAAAAYGYLNDDLYYKNLAVVSSCQAVGALAAFLGMRLADVMAARYVEAQARWYEVPTKAQRASELG TTEACLDEAVDMVTIFDADHPGPAMDGGEQLVLATDLLHLMTVERSRLPPELWQAASGVGDDAHRLVTQLLQAARARAAD EASTSSAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25923; Mature: 25923
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPLALTSATRRGARREQQEGATVADAGPSAPASDPHANTQLAQNLPRRPVREAPLRAPG CCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHCCCCCHHHCCCCCCC TPHGAHLANVGRSIAYVGAAGAALCGGFAALQAPAAAAYGYLNDDLYYKNLAVVSSCQAV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH GALAAFLGMRLADVMAARYVEAQARWYEVPTKAQRASELGTTEACLDEAVDMVTIFDADH HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHEEEEECCCC PGPAMDGGEQLVLATDLLHLMTVERSRLPPELWQAASGVGDDAHRLVTQLLQAARARAAD CCCCCCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH EASTSSAD HCCCCCCC >Mature Secondary Structure MRPLALTSATRRGARREQQEGATVADAGPSAPASDPHANTQLAQNLPRRPVREAPLRAPG CCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHCCCCCHHHCCCCCCC TPHGAHLANVGRSIAYVGAAGAALCGGFAALQAPAAAAYGYLNDDLYYKNLAVVSSCQAV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH GALAAFLGMRLADVMAARYVEAQARWYEVPTKAQRASELGTTEACLDEAVDMVTIFDADH HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHEEEEECCCC PGPAMDGGEQLVLATDLLHLMTVERSRLPPELWQAASGVGDDAHRLVTQLLQAARARAAD CCCCCCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH EASTSSAD HCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA