| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is add [H]
Identifier: 77748521
GI number: 77748521
Start: 367666
End: 369216
Strand: Reverse
Name: add [H]
Synonym: XAC0308
Alternate gene names: 77748521
Gene position: 369216-367666 (Counterclockwise)
Preceding gene: 21241083
Following gene: 21241081
Centisome position: 7.13
GC content: 66.86
Gene sequence:
>1551_bases ATGTTATTTCTTCGTCGCTGTCTGGTCCTGAGCGTATGGGCGTGCTTGCCCATCGTCGTGCACGCACGGCCAGCACCAGC GCCTGCGCCTGCGCAACAACGCCAACAGCAGGTGGCGCGGTTGTTCCGTGAGGCGGCCGCGCAGCCGGCGCAGCTACGCA CCTGGCTACAGGCCATGCCGAAAGGTGGCGACCTGCATAACCACCTGTCCGGTTCGGTGTATGCCGAGACGTATCTGCAA TGGGCCAGCGACGACGGCGCCTGCGTGCAAGTGGACGACCTGAGCCTGCGCGCGCCGCCGTGCGGGGCCGGTCAGGAGTC CGCGCGCGGCCTGGCGGCACGCAACGCCGCGCTGTACGGGCGGATGGTGAATTCGCTGTCGATGCGCAACTTCCTGCCCG GCCCGGCGCAACCCAGCGGTCACGATCAGTTCTTCAGCACCTTCGGCAAGTTCGATGCGGTGGTCCGCACCCGTGTCGCC GACACCGTCGCCGCAGTGCTGGAGCAGGCCGCACGCGACCGCGTGCCGTATGTGGAAATCATCGCCAACCCGCCGCAGAT GGATCAGGCTGCCAAGCGCATGCAGTCGCTGCCGTGGAAGGGCGAGGACGACGCCGCCAATCTGCGTGCGTTGCAGCCCG ACCTGGCGCCGCTGGTGCAGGCCGCGCAACGCGATCTTGCCGACATCGACGCGCAGGTCCGGCGCGTACTGCGTTGCGAC CAGGCCGATGCACGCCCCGGCTGCACGGTCGAGTACCGCTATGTTCCGTATGTGTTGCGCGTGCTGCCGCAGCCGATGGT GTTTGGGCAGATGGCGCTGGCGCATGCGCTGATCGCGGCCGGCGGCAGCCGCGCGGTGGCGCTGAACATCGTCGCGCCGG AAGACAATCCAGTGGCGTTGGCCGATTACGCGCGGCATATGGCGATGTTCCGCTTCTTCGCAACGCGCTACCCCGGTGTG CCGCTGTCGCTGCATGCCGGCGAGCTGGCGTTGGGGCTGGTGCCGCCGGCGCAGCTGCGCTCGCATATCCGGCAGGCGGT GGATGCAGGTGCGCGCCGCATCGGTCACGGGGTGGATCTACCCTACGAAGACGATGCGGAGGTACTGCTGCAACGCATGC GACGCGAACAGGTTGCGGTGGAGATCAACCTCACCAGCAACGATGTGATCCTGGGCATCAAAGGCGCCGCGCATCCGCTG GCGCTGTATCTGCGTGCCGGCGTGCCGGTCGTGCTGTCCACCGACGATGCCGGCGTCTCGCGTGCGGACATGACCCACGA GTACCAACGCGCGATGGAGGAACAGGGTATCGACTACCCCACCCTCAAACAGCTGGCCCGCAATGGCCTGCGCTACAGCT TCCTGCCGGGTGCGAGCCTGTGGGATGCCGACGGTAAAGCTGCGCAGGTCTGCGCCACTGCGTTGCAGCGCGAAACAGAT GATGCTGCCTGTCGAGCATTCCGCCAGGGCAGCGAGAAGGCTCGGCTGCAATGGCAGCTGGAAACCGACCTGGCCCAGTA CGAGCGCACGCTGTTGCTGCAACACAGATAG
Upstream 100 bases:
>100_bases CTTACCGGCGCGCACATGGGTGGCCTCGGGTCGCGCTGGCAGGCAAGCTATGTGGTCGCCGGCTGTCGCACGCCACCGTC TCTCCAAACGAGTCTCCTGC
Downstream 100 bases:
>100_bases CGCCGACAACGACACGACATATTCCACGTAGGAGCGCGCCCGAGCGCGAACGGACTTTACCGGTAACGCCCCGTCGCGCG CAGGCACGCTCCTACAGATG
Product: adenosine deaminase
Products: NA
Alternate protein names: Adenosine aminohydrolase [H]
Number of amino acids: Translated: 516; Mature: 516
Protein sequence:
>516_residues MLFLRRCLVLSVWACLPIVVHARPAPAPAPAQQRQQQVARLFREAAAQPAQLRTWLQAMPKGGDLHNHLSGSVYAETYLQ WASDDGACVQVDDLSLRAPPCGAGQESARGLAARNAALYGRMVNSLSMRNFLPGPAQPSGHDQFFSTFGKFDAVVRTRVA DTVAAVLEQAARDRVPYVEIIANPPQMDQAAKRMQSLPWKGEDDAANLRALQPDLAPLVQAAQRDLADIDAQVRRVLRCD QADARPGCTVEYRYVPYVLRVLPQPMVFGQMALAHALIAAGGSRAVALNIVAPEDNPVALADYARHMAMFRFFATRYPGV PLSLHAGELALGLVPPAQLRSHIRQAVDAGARRIGHGVDLPYEDDAEVLLQRMRREQVAVEINLTSNDVILGIKGAAHPL ALYLRAGVPVVLSTDDAGVSRADMTHEYQRAMEEQGIDYPTLKQLARNGLRYSFLPGASLWDADGKAAQVCATALQRETD DAACRAFRQGSEKARLQWQLETDLAQYERTLLLQHR
Sequences:
>Translated_516_residues MLFLRRCLVLSVWACLPIVVHARPAPAPAPAQQRQQQVARLFREAAAQPAQLRTWLQAMPKGGDLHNHLSGSVYAETYLQ WASDDGACVQVDDLSLRAPPCGAGQESARGLAARNAALYGRMVNSLSMRNFLPGPAQPSGHDQFFSTFGKFDAVVRTRVA DTVAAVLEQAARDRVPYVEIIANPPQMDQAAKRMQSLPWKGEDDAANLRALQPDLAPLVQAAQRDLADIDAQVRRVLRCD QADARPGCTVEYRYVPYVLRVLPQPMVFGQMALAHALIAAGGSRAVALNIVAPEDNPVALADYARHMAMFRFFATRYPGV PLSLHAGELALGLVPPAQLRSHIRQAVDAGARRIGHGVDLPYEDDAEVLLQRMRREQVAVEINLTSNDVILGIKGAAHPL ALYLRAGVPVVLSTDDAGVSRADMTHEYQRAMEEQGIDYPTLKQLARNGLRYSFLPGASLWDADGKAAQVCATALQRETD DAACRAFRQGSEKARLQWQLETDLAQYERTLLLQHR >Mature_516_residues MLFLRRCLVLSVWACLPIVVHARPAPAPAPAQQRQQQVARLFREAAAQPAQLRTWLQAMPKGGDLHNHLSGSVYAETYLQ WASDDGACVQVDDLSLRAPPCGAGQESARGLAARNAALYGRMVNSLSMRNFLPGPAQPSGHDQFFSTFGKFDAVVRTRVA DTVAAVLEQAARDRVPYVEIIANPPQMDQAAKRMQSLPWKGEDDAANLRALQPDLAPLVQAAQRDLADIDAQVRRVLRCD QADARPGCTVEYRYVPYVLRVLPQPMVFGQMALAHALIAAGGSRAVALNIVAPEDNPVALADYARHMAMFRFFATRYPGV PLSLHAGELALGLVPPAQLRSHIRQAVDAGARRIGHGVDLPYEDDAEVLLQRMRREQVAVEINLTSNDVILGIKGAAHPL ALYLRAGVPVVLSTDDAGVSRADMTHEYQRAMEEQGIDYPTLKQLARNGLRYSFLPGASLWDADGKAAQVCATALQRETD DAACRAFRQGSEKARLQWQLETDLAQYERTLLLQHR
Specific function: Unknown
COG id: COG1816
COG function: function code F; Adenosine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosine and AMP deaminases family [H]
Homologues:
Organism=Escherichia coli, GI1787910, Length=308, Percent_Identity=28.2467532467532, Blast_Score=75, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006650 - InterPro: IPR001365 - InterPro: IPR006330 [H]
Pfam domain/function: PF00962 A_deaminase [H]
EC number: =3.5.4.4 [H]
Molecular weight: Translated: 56605; Mature: 56605
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFLRRCLVLSVWACLPIVVHARPAPAPAPAQQRQQQVARLFREAAAQPAQLRTWLQAMP CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC KGGDLHNHLSGSVYAETYLQWASDDGACVQVDDLSLRAPPCGAGQESARGLAARNAALYG CCCCCHHHCCCCHHHHHHHHHCCCCCCEEEEECCEECCCCCCCCHHHHHHHHHHHHHHHH RMVNSLSMRNFLPGPAQPSGHDQFFSTFGKFDAVVRTRVADTVAAVLEQAARDRVPYVEI HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE IANPPQMDQAAKRMQSLPWKGEDDAANLRALQPDLAPLVQAAQRDLADIDAQVRRVLRCD ECCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC QADARPGCTVEYRYVPYVLRVLPQPMVFGQMALAHALIAAGGSRAVALNIVAPEDNPVAL CCCCCCCCEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEH ADYARHMAMFRFFATRYPGVPLSLHAGELALGLVPPAQLRSHIRQAVDAGARRIGHGVDL HHHHHHHHHHHHHHHHCCCCCEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCC PYEDDAEVLLQRMRREQVAVEINLTSNDVILGIKGAAHPLALYLRAGVPVVLSTDDAGVS CCCCCHHHHHHHHHHHCEEEEEEECCCCEEEEECCCCCHHHHHHHCCCCEEEECCCCCCC RADMTHEYQRAMEEQGIDYPTLKQLARNGLRYSFLPGASLWDADGKAAQVCATALQRETD HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCC DAACRAFRQGSEKARLQWQLETDLAQYERTLLLQHR HHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCCC >Mature Secondary Structure MLFLRRCLVLSVWACLPIVVHARPAPAPAPAQQRQQQVARLFREAAAQPAQLRTWLQAMP CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC KGGDLHNHLSGSVYAETYLQWASDDGACVQVDDLSLRAPPCGAGQESARGLAARNAALYG CCCCCHHHCCCCHHHHHHHHHCCCCCCEEEEECCEECCCCCCCCHHHHHHHHHHHHHHHH RMVNSLSMRNFLPGPAQPSGHDQFFSTFGKFDAVVRTRVADTVAAVLEQAARDRVPYVEI HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE IANPPQMDQAAKRMQSLPWKGEDDAANLRALQPDLAPLVQAAQRDLADIDAQVRRVLRCD ECCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC QADARPGCTVEYRYVPYVLRVLPQPMVFGQMALAHALIAAGGSRAVALNIVAPEDNPVAL CCCCCCCCEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEH ADYARHMAMFRFFATRYPGVPLSLHAGELALGLVPPAQLRSHIRQAVDAGARRIGHGVDL HHHHHHHHHHHHHHHHCCCCCEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCC PYEDDAEVLLQRMRREQVAVEINLTSNDVILGIKGAAHPLALYLRAGVPVVLSTDDAGVS CCCCCHHHHHHHHHHHCEEEEEEECCCCEEEEECCCCCHHHHHHHCCCCEEEECCCCCCC RADMTHEYQRAMEEQGIDYPTLKQLARNGLRYSFLPGASLWDADGKAAQVCATALQRETD HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCC DAACRAFRQGSEKARLQWQLETDLAQYERTLLLQHR HHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA