| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is fpvA [H]
Identifier: 77748514
GI number: 77748514
Start: 215783
End: 217984
Strand: Direct
Name: fpvA [H]
Synonym: XAC0176
Alternate gene names: 77748514
Gene position: 215783-217984 (Clockwise)
Preceding gene: 21240949
Following gene: 77748516
Centisome position: 4.17
GC content: 64.9
Gene sequence:
>2202_bases ATGTCTGCTGCCATCGCTCCCCTTGGCCTGTTGTCTGCCGCGCTGCTGTGCGCACTGTCGACCTTGGCCCCCGCCGCTGC TCATGCCGCCGAGGCCGCCGATGCGACCAACGCCACGACGCTTGACCAGGTCAGCGTCAACGGTACGGTGAGTCGCGCGC AACCGGCCACCACCACGCGGCTGCCGCTGACCCTGCAGGAAACGCCGCAGTCGGTGAGCGTGATCGGGTTGCAGCGCCTG GAAGAGCAATCGCTGTTCAGCATCGACGATGTGATGCGTCATGTCACCGGCGTCAACGTGTCGTTCTACGACACCCAGCG GCCGCTGTATTTCGCGCGCGGTTTCCAGATCACCGACTTCCAGGTCGACGGCCTGCCCACCTACAGCGGCGCCACCAATC AGGAATACGACACGGTCTTCTACGACCGCATCGAGGTGATCCGCGGCGCCAATGGCCTGCTCACCGGCGCGGGCATTCCC TCGGCCACGGTCAACCTGTTGCGCAAGCGCCCTGGCAAGGACTTCGACGCCTCGTTCGGCGTGAGCACGGGCACCTGGGA TTTCCGCCGCATGCAGGCAGACGTCAATGCGCCGTTGACCGAAGATGGACGCTTTCGCAGCCGCGTGGTGGCCGCCTGGC AGGATCGCGATTACTACTACGACCGCTACCACGACAACAAGATGTCGGGCATGGCGGTGCTGGAAGGCGACCTGACCGAG AGCAGCACGCTGACCGTCGGCTACCAGCGCCAGGACAACACCCCGGTCGGTTCGACCTGGGGAACGGTGCCGTTCTTCGC GGCCGACGGCTCCTTCGCCAACCTGTCGCGCTCGACCAACATGGCGCCGGAATGGACGCGCTGGCAACGCGAAACCAGCA CTGCGTTTGCCAACCTGGAACAACGCTTCGGGCAGGACTGGTTGCTGCGCGTCAACACCGCCCACACCAAGGGCGCCGTG CAGAGCCTGCGCGTCTACGGCACCGGTTACCCGGCCGCCGATGGCAGCGGCGTGTTTTTGCGCGCCAACGCTGGCGAAAC GCAGGACACGCGCGATAGCGTGGACGTGTATCTGTCCGGCGGGTTCGCCTTGTTCGGCCGCCAGCACGATGTGGTGATCG GCGGCAGCTGGCAGGACCTGCAATCGACCACCTATACCGTGGCGCAGGCCTATCCCGACGACTGGGCCACCTGCGGCAGC GAACGTTGCTATTTCATTCCCAACATCCGCAACTGGAACGGCGACGCGTCCGAGGTGACCTATGCGCGTACCGGCGCGCG TCGCCAGGCACGCACCACCCAGCGCGGCGTGTATGCCTCCACGCGCTTGCGGCTGGCCGACCCGCTGTCGTTGATTGCCG GCGCGCGGCTGAGCTCCTGGGAAACCCGCACCCAGGCGTTCGATGCCAGCGGCAGCTACACCGGCACCAGCGGCCGTTAT GAAGTAAGCGACGAAGTCACCCCATACGTCGGTCTGGTGTACGACATCGTGCCGGATGTGTCGGTCTACGCCAGCTACAC CGAAATCTTCAATCCGCAGAACTACCGCGACAAGGACAACAACCTGCTCGCACCGGTGGAAGGGTCCAACCTGGAAGCCG GTATCAAGGCGCAGTTGTTCGATGGCCATGCGATGGCCACCGCCGCCGTGTTCGAAGCCAAGCAGGACAACTATGCGGTG CGCGACATGACCCAGCCGGAAGCTTCGCTGCCGGATGGCAGCTCGGCCTACATCGGCGTGGACGGCACCAAGAGCCGTGG CTGGGAAGTGGACGTCAATGGCGAAGTGCGGCCCGGTTGGACCATCAACGCCGGCTATACCCACGTCAAGGTGACGCGCG CGCCCACCGATGCGATCTACGCCAACCTGCCCGAAGATTATCTGCAGCTCTCCACCCAGTGGCGCCTGCCGGGGACGTGG GACCGGTTGAGCATCGGCGGCGGCGTGAGCTGGCAGAGCGCGGTGCGCGGCTTCAATATCGCACGCCCCACCGGCGACGG CACTGGCGCTACCAGGCCGGTCACCGTGGAGCAGAACCCGTATGCGCTGGTGCATTTCAACGCCAACTACCGCATCAGCG ACCAATGGACCGCCACGCTGGCGGTGCGTAACGCATTGGACAAGACCTACTGGGCGAATCTGGATTATCAGAACTACGGC GAACCGCGCTTTGTCAGCGTGTCGCTACGTTGGCGGTATTGA
Upstream 100 bases:
>100_bases CGCAGGGTCAGCCAGCCGGTTCGAGTGGACGCCCGCGTGTGCCTGCGCCTTTCCCTGTTGCGTGACGCGCTGCGTCGGCA ACGATCGACGAGAACGCCCC
Downstream 100 bases:
>100_bases GGCATTGCCGATGAAGTCCGGGCTTGAGACGTTGCCCATCAAGTCCAGGCGTTGCTACCGGTAGGCCTCGCGGCCAGGGC CGCTCCTGCAAGAGCGGTGC
Product: ferripyoverdine receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 733; Mature: 732
Protein sequence:
>733_residues MSAAIAPLGLLSAALLCALSTLAPAAAHAAEAADATNATTLDQVSVNGTVSRAQPATTTRLPLTLQETPQSVSVIGLQRL EEQSLFSIDDVMRHVTGVNVSFYDTQRPLYFARGFQITDFQVDGLPTYSGATNQEYDTVFYDRIEVIRGANGLLTGAGIP SATVNLLRKRPGKDFDASFGVSTGTWDFRRMQADVNAPLTEDGRFRSRVVAAWQDRDYYYDRYHDNKMSGMAVLEGDLTE SSTLTVGYQRQDNTPVGSTWGTVPFFAADGSFANLSRSTNMAPEWTRWQRETSTAFANLEQRFGQDWLLRVNTAHTKGAV QSLRVYGTGYPAADGSGVFLRANAGETQDTRDSVDVYLSGGFALFGRQHDVVIGGSWQDLQSTTYTVAQAYPDDWATCGS ERCYFIPNIRNWNGDASEVTYARTGARRQARTTQRGVYASTRLRLADPLSLIAGARLSSWETRTQAFDASGSYTGTSGRY EVSDEVTPYVGLVYDIVPDVSVYASYTEIFNPQNYRDKDNNLLAPVEGSNLEAGIKAQLFDGHAMATAAVFEAKQDNYAV RDMTQPEASLPDGSSAYIGVDGTKSRGWEVDVNGEVRPGWTINAGYTHVKVTRAPTDAIYANLPEDYLQLSTQWRLPGTW DRLSIGGGVSWQSAVRGFNIARPTGDGTGATRPVTVEQNPYALVHFNANYRISDQWTATLAVRNALDKTYWANLDYQNYG EPRFVSVSLRWRY
Sequences:
>Translated_733_residues MSAAIAPLGLLSAALLCALSTLAPAAAHAAEAADATNATTLDQVSVNGTVSRAQPATTTRLPLTLQETPQSVSVIGLQRL EEQSLFSIDDVMRHVTGVNVSFYDTQRPLYFARGFQITDFQVDGLPTYSGATNQEYDTVFYDRIEVIRGANGLLTGAGIP SATVNLLRKRPGKDFDASFGVSTGTWDFRRMQADVNAPLTEDGRFRSRVVAAWQDRDYYYDRYHDNKMSGMAVLEGDLTE SSTLTVGYQRQDNTPVGSTWGTVPFFAADGSFANLSRSTNMAPEWTRWQRETSTAFANLEQRFGQDWLLRVNTAHTKGAV QSLRVYGTGYPAADGSGVFLRANAGETQDTRDSVDVYLSGGFALFGRQHDVVIGGSWQDLQSTTYTVAQAYPDDWATCGS ERCYFIPNIRNWNGDASEVTYARTGARRQARTTQRGVYASTRLRLADPLSLIAGARLSSWETRTQAFDASGSYTGTSGRY EVSDEVTPYVGLVYDIVPDVSVYASYTEIFNPQNYRDKDNNLLAPVEGSNLEAGIKAQLFDGHAMATAAVFEAKQDNYAV RDMTQPEASLPDGSSAYIGVDGTKSRGWEVDVNGEVRPGWTINAGYTHVKVTRAPTDAIYANLPEDYLQLSTQWRLPGTW DRLSIGGGVSWQSAVRGFNIARPTGDGTGATRPVTVEQNPYALVHFNANYRISDQWTATLAVRNALDKTYWANLDYQNYG EPRFVSVSLRWRY >Mature_732_residues SAAIAPLGLLSAALLCALSTLAPAAAHAAEAADATNATTLDQVSVNGTVSRAQPATTTRLPLTLQETPQSVSVIGLQRLE EQSLFSIDDVMRHVTGVNVSFYDTQRPLYFARGFQITDFQVDGLPTYSGATNQEYDTVFYDRIEVIRGANGLLTGAGIPS ATVNLLRKRPGKDFDASFGVSTGTWDFRRMQADVNAPLTEDGRFRSRVVAAWQDRDYYYDRYHDNKMSGMAVLEGDLTES STLTVGYQRQDNTPVGSTWGTVPFFAADGSFANLSRSTNMAPEWTRWQRETSTAFANLEQRFGQDWLLRVNTAHTKGAVQ SLRVYGTGYPAADGSGVFLRANAGETQDTRDSVDVYLSGGFALFGRQHDVVIGGSWQDLQSTTYTVAQAYPDDWATCGSE RCYFIPNIRNWNGDASEVTYARTGARRQARTTQRGVYASTRLRLADPLSLIAGARLSSWETRTQAFDASGSYTGTSGRYE VSDEVTPYVGLVYDIVPDVSVYASYTEIFNPQNYRDKDNNLLAPVEGSNLEAGIKAQLFDGHAMATAAVFEAKQDNYAVR DMTQPEASLPDGSSAYIGVDGTKSRGWEVDVNGEVRPGWTINAGYTHVKVTRAPTDAIYANLPEDYLQLSTQWRLPGTWD RLSIGGGVSWQSAVRGFNIARPTGDGTGATRPVTVEQNPYALVHFNANYRISDQWTATLAVRNALDKTYWANLDYQNYGE PRFVSVSLRWRY
Specific function: Receptor for the siderophore ferripyoverdine [H]
COG id: COG4773
COG function: function code P; Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1787344, Length=755, Percent_Identity=32.9801324503311, Blast_Score=389, Evalue=1e-109, Organism=Escherichia coli, GI1787024, Length=787, Percent_Identity=21.728081321474, Blast_Score=76, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR011662 - InterPro: IPR000531 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF07660 STN; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 80598; Mature: 80466
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAIAPLGLLSAALLCALSTLAPAAAHAAEAADATNATTLDQVSVNGTVSRAQPATTTR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCEE LPLTLQETPQSVSVIGLQRLEEQSLFSIDDVMRHVTGVNVSFYDTQRPLYFARGFQITDF EEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCEEEEEE QVDGLPTYSGATNQEYDTVFYDRIEVIRGANGLLTGAGIPSATVNLLRKRPGKDFDASFG EECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHCCCCCCCCCCC VSTGTWDFRRMQADVNAPLTEDGRFRSRVVAAWQDRDYYYDRYHDNKMSGMAVLEGDLTE CCCCCCHHEEEECCCCCCCCCCCCHHHEEEEEEECCCCEECEECCCCCCCEEEEECCCCC SSTLTVGYQRQDNTPVGSTWGTVPFFAADGSFANLSRSTNMAPEWTRWQRETSTAFANLE CCEEEEEEEECCCCCCCCCCCCCEEEECCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHH QRFGQDWLLRVNTAHTKGAVQSLRVYGTGYPAADGSGVFLRANAGETQDTRDSVDVYLSG HHCCCCEEEEEECCCCHHHHHEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEC GFALFGRQHDVVIGGSWQDLQSTTYTVAQAYPDDWATCGSERCYFIPNIRNWNGDASEVT CEEEECCCCCEEECCCHHHHCCCEEEEEECCCCHHHHCCCCCEEECCCCCCCCCCCCEEE YARTGARRQARTTQRGVYASTRLRLADPLSLIAGARLSSWETRTQAFDASGSYTGTSGRY EECCCCHHHHHHHHCCCEEEEEEEECCCHHHHHCCCCCCCHHHHHEECCCCCCCCCCCCE EVSDEVTPYVGLVYDIVPDVSVYASYTEIFNPQNYRDKDNNLLAPVEGSNLEAGIKAQLF EECCCCCCHHHHHHHHCCCHHHEEHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCEEEEE DGHAMATAAVFEAKQDNYAVRDMTQPEASLPDGSSAYIGVDGTKSRGWEVDVNGEVRPGW CCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCCEEEECCCCCCCCE TINAGYTHVKVTRAPTDAIYANLPEDYLQLSTQWRLPGTWDRLSIGGGVSWQSAVRGFNI EEECCEEEEEEEECCCCHHEECCCHHHHHEECEECCCCCCCEEEECCCCCHHHHHCCCEE ARPTGDGTGATRPVTVEQNPYALVHFNANYRISDQWTATLAVRNALDKTYWANLDYQNYG ECCCCCCCCCCCCEEECCCCEEEEEECCCEEECCCCEEEHHHHHHHHHHHEECCCCCCCC EPRFVSVSLRWRY CCEEEEEEEEECC >Mature Secondary Structure SAAIAPLGLLSAALLCALSTLAPAAAHAAEAADATNATTLDQVSVNGTVSRAQPATTTR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCEE LPLTLQETPQSVSVIGLQRLEEQSLFSIDDVMRHVTGVNVSFYDTQRPLYFARGFQITDF EEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCEEEEEE QVDGLPTYSGATNQEYDTVFYDRIEVIRGANGLLTGAGIPSATVNLLRKRPGKDFDASFG EECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHCCCCCCCCCCC VSTGTWDFRRMQADVNAPLTEDGRFRSRVVAAWQDRDYYYDRYHDNKMSGMAVLEGDLTE CCCCCCHHEEEECCCCCCCCCCCCHHHEEEEEEECCCCEECEECCCCCCCEEEEECCCCC SSTLTVGYQRQDNTPVGSTWGTVPFFAADGSFANLSRSTNMAPEWTRWQRETSTAFANLE CCEEEEEEEECCCCCCCCCCCCCEEEECCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHH QRFGQDWLLRVNTAHTKGAVQSLRVYGTGYPAADGSGVFLRANAGETQDTRDSVDVYLSG HHCCCCEEEEEECCCCHHHHHEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEC GFALFGRQHDVVIGGSWQDLQSTTYTVAQAYPDDWATCGSERCYFIPNIRNWNGDASEVT CEEEECCCCCEEECCCHHHHCCCEEEEEECCCCHHHHCCCCCEEECCCCCCCCCCCCEEE YARTGARRQARTTQRGVYASTRLRLADPLSLIAGARLSSWETRTQAFDASGSYTGTSGRY EECCCCHHHHHHHHCCCEEEEEEEECCCHHHHHCCCCCCCHHHHHEECCCCCCCCCCCCE EVSDEVTPYVGLVYDIVPDVSVYASYTEIFNPQNYRDKDNNLLAPVEGSNLEAGIKAQLF EECCCCCCHHHHHHHHCCCHHHEEHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCEEEEE DGHAMATAAVFEAKQDNYAVRDMTQPEASLPDGSSAYIGVDGTKSRGWEVDVNGEVRPGW CCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCCEEEECCCCCCCCE TINAGYTHVKVTRAPTDAIYANLPEDYLQLSTQWRLPGTWDRLSIGGGVSWQSAVRGFNI EEECCEEEEEEEECCCCHHEECCCHHHHHEECEECCCCCCCEEEECCCCCHHHHHCCCEE ARPTGDGTGATRPVTVEQNPYALVHFNANYRISDQWTATLAVRNALDKTYWANLDYQNYG ECCCCCCCCCCCCEEECCCCEEEEEECCCEEECCCCEEEHHHHHHHHHHHEECCCCCCCC EPRFVSVSLRWRY CCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8335619; 8918232; 10984043 [H]