| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 77748508
Identifier: 77748508
GI number: 77748508
Start: 139019
End: 139837
Strand: Reverse
Name: 77748508
Synonym: XAC0119
Alternate gene names: NA
Gene position: 139837-139019 (Counterclockwise)
Preceding gene: 21240894
Following gene: 21240892
Centisome position: 2.7
GC content: 60.93
Gene sequence:
>819_bases GTGACTGAAGACCGGGATTGGGGAGTCGGGAGTCGGGAGTCGGAGAGCGCAGCAAGCTCTCCGCAGCCTGATGTTTTTCC TGCACCTCCTGTTTCCGGTCCACGCGCCTCGGCGTCGTCCGCGCCGCGCCGCCACTTCCTTGGCCTGTTGCTTGGTGGCG TCGCTGCGTTGGCGCTGCCGCAGCGCGCGCGCGCGGCCGGCAATTACGATTTCTGGTTCACCCGGTTGCGCTACGACTCC GGCGATTGGGATGTGGATGCGCGCATGCCGTCCAACCTGATCACCTCGTTGATCGACTACACCCAGCTGCGCGTGGATCC GCAGGAACACGTGCTGGATCTGGCCGACCCGCGCATGTTGCAGGCACCGTTCTGCTATCTGTCCGGGCACAAGCTGGTGG AGTTCAATCCGGCCGAGCGACGCAATTTCGAGCGCTATGTGCGTAACGGCGGCTTCGTGTTCGTGGACGACTGCAATCAC GATATCGATGGCCTGTTCGCCACCTCGTTCGAAGCGCAGATGACCTCGATCTTCGGCAAGACGGCGTTGCAGAAACTCCC CAAGAACCATCGGCTCTATCGCGCATTCTTCACCTTTCCCGATGGCCCGCCGGCAACCGGTTTCGAGCTCAATGGCTGGG GCGACGACCTGGTGCACGACTATCTCAAAGGCATCAGCATCGATGGCCGCCTCGGGGTGCTCTACAGCAACAAGGATTAC GGTTGTGAGTGGGATTACGACTGGCGCAACAAGCGCTTTCTGGCCGAAGACAACACCAAGTTCGGCGTGAACATCGTGAT GTATGCGCTGACCAATTGA
Upstream 100 bases:
>100_bases GCAAGCCGGTGCGCGTGGCCGGCGACGAATCCAACTTCGTGATGATGATTCCGCCGATGCGGCTGCGGGACTTCACGTTT ACCTCGTTGTCGGATGCGGT
Downstream 100 bases:
>100_bases TCGCCGCATGTCGATCGCGATGCCTTTTGATCGACACCTTGCAGCGCGCTTGCGCGCGATGAAGATGTACCGGTGAAGCG TCGCGCGCAAGCGCGCTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MTEDRDWGVGSRESESAASSPQPDVFPAPPVSGPRASASSAPRRHFLGLLLGGVAALALPQRARAAGNYDFWFTRLRYDS GDWDVDARMPSNLITSLIDYTQLRVDPQEHVLDLADPRMLQAPFCYLSGHKLVEFNPAERRNFERYVRNGGFVFVDDCNH DIDGLFATSFEAQMTSIFGKTALQKLPKNHRLYRAFFTFPDGPPATGFELNGWGDDLVHDYLKGISIDGRLGVLYSNKDY GCEWDYDWRNKRFLAEDNTKFGVNIVMYALTN
Sequences:
>Translated_272_residues MTEDRDWGVGSRESESAASSPQPDVFPAPPVSGPRASASSAPRRHFLGLLLGGVAALALPQRARAAGNYDFWFTRLRYDS GDWDVDARMPSNLITSLIDYTQLRVDPQEHVLDLADPRMLQAPFCYLSGHKLVEFNPAERRNFERYVRNGGFVFVDDCNH DIDGLFATSFEAQMTSIFGKTALQKLPKNHRLYRAFFTFPDGPPATGFELNGWGDDLVHDYLKGISIDGRLGVLYSNKDY GCEWDYDWRNKRFLAEDNTKFGVNIVMYALTN >Mature_271_residues TEDRDWGVGSRESESAASSPQPDVFPAPPVSGPRASASSAPRRHFLGLLLGGVAALALPQRARAAGNYDFWFTRLRYDSG DWDVDARMPSNLITSLIDYTQLRVDPQEHVLDLADPRMLQAPFCYLSGHKLVEFNPAERRNFERYVRNGGFVFVDDCNHD IDGLFATSFEAQMTSIFGKTALQKLPKNHRLYRAFFTFPDGPPATGFELNGWGDDLVHDYLKGISIDGRLGVLYSNKDYG CEWDYDWRNKRFLAEDNTKFGVNIVMYALTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30706; Mature: 30574
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEDRDWGVGSRESESAASSPQPDVFPAPPVSGPRASASSAPRRHFLGLLLGGVAALALP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC QRARAAGNYDFWFTRLRYDSGDWDVDARMPSNLITSLIDYTQLRVDPQEHVLDLADPRML HHHHHCCCCCEEEEEEEECCCCCEECCCCCHHHHHHHHHHHHEEECHHHHHHCCCCCCHH QAPFCYLSGHKLVEFNPAERRNFERYVRNGGFVFVDDCNHDIDGLFATSFEAQMTSIFGK HCCEEEECCCEEEEECCHHHHHHHHHHHCCCEEEEECCCCCCCCEEECHHHHHHHHHHHH TALQKLPKNHRLYRAFFTFPDGPPATGFELNGWGDDLVHDYLKGISIDGRLGVLYSNKDY HHHHHCCCCCEEEEEEEECCCCCCCCCEEECCCCHHHHHHHHHCCCCCCEEEEEECCCCC GCEWDYDWRNKRFLAEDNTKFGVNIVMYALTN CCCCCCCCCCCEEEECCCCEECEEEEEEEECC >Mature Secondary Structure TEDRDWGVGSRESESAASSPQPDVFPAPPVSGPRASASSAPRRHFLGLLLGGVAALALP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC QRARAAGNYDFWFTRLRYDSGDWDVDARMPSNLITSLIDYTQLRVDPQEHVLDLADPRML HHHHHCCCCCEEEEEEEECCCCCEECCCCCHHHHHHHHHHHHEEECHHHHHHCCCCCCHH QAPFCYLSGHKLVEFNPAERRNFERYVRNGGFVFVDDCNHDIDGLFATSFEAQMTSIFGK HCCEEEECCCEEEEECCHHHHHHHHHHHCCCEEEEECCCCCCCCEEECHHHHHHHHHHHH TALQKLPKNHRLYRAFFTFPDGPPATGFELNGWGDDLVHDYLKGISIDGRLGVLYSNKDY HHHHHCCCCCEEEEEEEECCCCCCCCCEEECCCCHHHHHHHHHCCCCCCEEEEEECCCCC GCEWDYDWRNKRFLAEDNTKFGVNIVMYALTN CCCCCCCCCCCEEEECCCCEECEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA