| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 77748507
Identifier: 77748507
GI number: 77748507
Start: 130626
End: 131273
Strand: Direct
Name: 77748507
Synonym: XAC0113
Alternate gene names: NA
Gene position: 130626-131273 (Clockwise)
Preceding gene: 21240886
Following gene: 77748509
Centisome position: 2.52
GC content: 66.05
Gene sequence:
>648_bases ATGCCCAAACCGTTTTCGCCAGCGTCCGCGCGCAACCGCGACCCGATTCTCGAGGTACTGCGCACGCATTTTGCCGACCG GCAGCAGGTGCTGGAAATCGGTGCGGGCACCGGACAACACGCAGTGCATTTCGCTGCGGCGATGCCGTGGTTGCAGTGGC AGGCCAGCGATCATCTCGAGCATCTTGCCGGCATGCGGCAATGGCTGGACGAGGCGGCACTGCCGAACACGCCGCCACCG ATTGCACTACAGGCCGTGCCCACGCCCACGCCCGGGCTCGCACCGCCGCCCAGCCTGCCGGTGCTGGTTGGCGGCCAGCA CGGCTTCGATGCGATCTACAGCGCCAATACCTTGCACATCATGGGCTGGCCGCAGGTGCAGGCCTTGTTTGCCGGCCTGC CGGCGGTGATGGCGCCCGATGCGGTGCTGGCGATCTACGGGCCGTTCAACCGCAATGGGCAATTCACCAGCGACAGCAAT CGCGCCTTCGATGCCATGCTGCGCGAGCGCGACCCTGCCTCGGGTATTCGCGATGCCGAAGCGGTGGATGCCTTGGCGGC ATCGGTGGGGTTGCAGTTGATCGACGATGTCGCGTTGCCGGCCAACAACCATTGCCGGGTATGGCGGCGCGTGACGGTGG TGAGTTGA
Upstream 100 bases:
>100_bases CGCAGTGCGGGCGAAGGGCAGCGGCATCCTGTTCACCGAACGGTTGCCGCCGAGCGATTCCTGCGCGCGACAATCGCCAC AACCACGGCAGATGCCGATG
Downstream 100 bases:
>100_bases ATCGCCGGCACTGCTGAGCGTAGTGGATGGGCATGTTGTTGGGTCGGCGCAACGTCTCACCGTGTAGCCTGCGCATCTGC GTGCGGAGGCCAACGCGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MPKPFSPASARNRDPILEVLRTHFADRQQVLEIGAGTGQHAVHFAAAMPWLQWQASDHLEHLAGMRQWLDEAALPNTPPP IALQAVPTPTPGLAPPPSLPVLVGGQHGFDAIYSANTLHIMGWPQVQALFAGLPAVMAPDAVLAIYGPFNRNGQFTSDSN RAFDAMLRERDPASGIRDAEAVDALAASVGLQLIDDVALPANNHCRVWRRVTVVS
Sequences:
>Translated_215_residues MPKPFSPASARNRDPILEVLRTHFADRQQVLEIGAGTGQHAVHFAAAMPWLQWQASDHLEHLAGMRQWLDEAALPNTPPP IALQAVPTPTPGLAPPPSLPVLVGGQHGFDAIYSANTLHIMGWPQVQALFAGLPAVMAPDAVLAIYGPFNRNGQFTSDSN RAFDAMLRERDPASGIRDAEAVDALAASVGLQLIDDVALPANNHCRVWRRVTVVS >Mature_214_residues PKPFSPASARNRDPILEVLRTHFADRQQVLEIGAGTGQHAVHFAAAMPWLQWQASDHLEHLAGMRQWLDEAALPNTPPPI ALQAVPTPTPGLAPPPSLPVLVGGQHGFDAIYSANTLHIMGWPQVQALFAGLPAVMAPDAVLAIYGPFNRNGQFTSDSNR AFDAMLRERDPASGIRDAEAVDALAASVGLQLIDDVALPANNHCRVWRRVTVVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI93102387, Length=213, Percent_Identity=33.8028169014084, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71998087, Length=207, Percent_Identity=31.4009661835749, Blast_Score=113, Evalue=9e-26, Organism=Drosophila melanogaster, GI28574095, Length=209, Percent_Identity=29.1866028708134, Blast_Score=96, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23149; Mature: 23017
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKPFSPASARNRDPILEVLRTHFADRQQVLEIGAGTGQHAVHFAAAMPWLQWQASDHLE CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHCHHHHHH HLAGMRQWLDEAALPNTPPPIALQAVPTPTPGLAPPPSLPVLVGGQHGFDAIYSANTLHI HHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCHHHCCCCEEEE MGWPQVQALFAGLPAVMAPDAVLAIYGPFNRNGQFTSDSNRAFDAMLRERDPASGIRDAE ECCHHHHHHHHCCCHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHH AVDALAASVGLQLIDDVALPANNHCRVWRRVTVVS HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECC >Mature Secondary Structure PKPFSPASARNRDPILEVLRTHFADRQQVLEIGAGTGQHAVHFAAAMPWLQWQASDHLE CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHCHHHHHH HLAGMRQWLDEAALPNTPPPIALQAVPTPTPGLAPPPSLPVLVGGQHGFDAIYSANTLHI HHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCHHHCCCCEEEE MGWPQVQALFAGLPAVMAPDAVLAIYGPFNRNGQFTSDSNRAFDAMLRERDPASGIRDAE ECCHHHHHHHHCCCHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHH AVDALAASVGLQLIDDVALPANNHCRVWRRVTVVS HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA