| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 77748500
Identifier: 77748500
GI number: 77748500
Start: 19442
End: 20143
Strand: Reverse
Name: 77748500
Synonym: XAC0018
Alternate gene names: NA
Gene position: 20143-19442 (Counterclockwise)
Preceding gene: 21240793
Following gene: 21240791
Centisome position: 0.39
GC content: 63.53
Gene sequence:
>702_bases ATGAGCCAACCCGACTTCATCCAGATCACCGATAACGCCATCGCGCACGAAGATTGCGTGGCCATCGTGCAGCGCATGCG CCAGAGCCAGCAGCTGCATCCCGGCCGCATCGGTGGCGGCGTCTTTCCCGACCTCAAACACAGCCGCGACCTGCGCATCA GTGGGATGGCCGAATGGGCCGAAGTGGAAAACCGCCTGCAACAGGCCGTATTCGAGGGCGTGCTCACCTATCTGCGGCAG TATCCGCAGGCGTTGATTTCACCGCTGATGCTGCAGGTCACCACTGCCGATGGCAGACCGCATCGCCTGGTGGCCGAGGA CATCGTGCAGATGAGCGACCAGGCGCTGGGCGATCTGGCACGCACCTGCCTGCGCCCGGGCGCGATCAATCTGCAGTGGT ACACCGCCGACCAGGGCGGCTACCCATACTGGCATTGCGAGCTGTATCCGCGCGATGCCAATGCCGACACGCTGCATCGG CATCTGCTGTGGACGCTGTATCTCAACGACGACTTCGCGCAAGGCGAAACCGAATTCCTGTTCCAGCAACGCAAGGCGCG CCCACGCACCGGCAGTCTGCTGATCGCCCCCACCGCCTTCACTCATACTCACCGCGGCAACCGCCCGGTCGGCGGCGACA AGTTCATCGCCACCAGCTGGATCCTGTTTCAATCGGCGCAGGCGCTTTACGGCGGGGAATAG
Upstream 100 bases:
>100_bases AGCCGCGTACTGGGATGCCAACAACGTCGCGTACCGATCCAGCCTGCGCAATGCATGGCGAACGCTGCAACCGGCGCGAC AGATTGCTATGGTCAGGCGC
Downstream 100 bases:
>100_bases GGAATCGGGAATGGGGAATCGCAACGGCGACGCTTTCTGCTGCTGCTGCTGCTGTTGCTTTACCGATTCCCGATTCTCCA TTCCCCCAGTTGCGACTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Prolyl 4-Hydroxylase Alpha Subunit; 2-Oxoglutarate-Fe(II) Oxygenase Family Protein; 2-Oxoglutarate-Fe(Ii) Oxygenase Family; 2OG-Fe(II) Oxygenase Family Oxidoreductase; Dioxygenase; 2OG-Fe(II) Oxygenase Superfamily; 2OG-Fe(II) Oxygenase Family Protein
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MSQPDFIQITDNAIAHEDCVAIVQRMRQSQQLHPGRIGGGVFPDLKHSRDLRISGMAEWAEVENRLQQAVFEGVLTYLRQ YPQALISPLMLQVTTADGRPHRLVAEDIVQMSDQALGDLARTCLRPGAINLQWYTADQGGYPYWHCELYPRDANADTLHR HLLWTLYLNDDFAQGETEFLFQQRKARPRTGSLLIAPTAFTHTHRGNRPVGGDKFIATSWILFQSAQALYGGE
Sequences:
>Translated_233_residues MSQPDFIQITDNAIAHEDCVAIVQRMRQSQQLHPGRIGGGVFPDLKHSRDLRISGMAEWAEVENRLQQAVFEGVLTYLRQ YPQALISPLMLQVTTADGRPHRLVAEDIVQMSDQALGDLARTCLRPGAINLQWYTADQGGYPYWHCELYPRDANADTLHR HLLWTLYLNDDFAQGETEFLFQQRKARPRTGSLLIAPTAFTHTHRGNRPVGGDKFIATSWILFQSAQALYGGE >Mature_232_residues SQPDFIQITDNAIAHEDCVAIVQRMRQSQQLHPGRIGGGVFPDLKHSRDLRISGMAEWAEVENRLQQAVFEGVLTYLRQY PQALISPLMLQVTTADGRPHRLVAEDIVQMSDQALGDLARTCLRPGAINLQWYTADQGGYPYWHCELYPRDANADTLHRH LLWTLYLNDDFAQGETEFLFQQRKARPRTGSLLIAPTAFTHTHRGNRPVGGDKFIATSWILFQSAQALYGGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26373; Mature: 26242
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPDFIQITDNAIAHEDCVAIVQRMRQSQQLHPGRIGGGVFPDLKHSRDLRISGMAEWA CCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCHHHHH EVENRLQQAVFEGVLTYLRQYPQALISPLMLQVTTADGRPHRLVAEDIVQMSDQALGDLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH RTCLRPGAINLQWYTADQGGYPYWHCELYPRDANADTLHRHLLWTLYLNDDFAQGETEFL HHHHCCCCEEEEEEECCCCCCCEEEEEEEECCCCHHHHHHHEEEEEEECCCCCCCHHHHH FQQRKARPRTGSLLIAPTAFTHTHRGNRPVGGDKFIATSWILFQSAQALYGGE HHHHHCCCCCCCEEEECCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SQPDFIQITDNAIAHEDCVAIVQRMRQSQQLHPGRIGGGVFPDLKHSRDLRISGMAEWA CCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCHHHHH EVENRLQQAVFEGVLTYLRQYPQALISPLMLQVTTADGRPHRLVAEDIVQMSDQALGDLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH RTCLRPGAINLQWYTADQGGYPYWHCELYPRDANADTLHRHLLWTLYLNDDFAQGETEFL HHHHCCCCEEEEEEECCCCCCCEEEEEEEECCCCHHHHHHHEEEEEEECCCCCCCHHHHH FQQRKARPRTGSLLIAPTAFTHTHRGNRPVGGDKFIATSWILFQSAQALYGGE HHHHHCCCCCCCEEEECCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA