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The map label for this gene is oxaA [H]

Identifier: 21245084

GI number: 21245084

Start: 5172987

End: 5174711

Strand: Reverse

Name: oxaA [H]

Synonym: XAC4372

Alternate gene names: 21245084

Gene position: 5174711-5172987 (Counterclockwise)

Preceding gene: 21245085

Following gene: 77748781

Centisome position: 99.98

GC content: 65.39

Gene sequence:

>1725_bases
ATGAACCAGACCCGTGTTTTCCTGATTTTTGCCTGGCTGATGGTCGCGGCGCTGCTGTGGATGGAGTGGGGCAAGGACAA
GGCCGCTGCCAATGCGCCTGTGGTCGCTGCAACGCAGTCGGTTCCGGCGGCCCGTGATCTGGATGCGGCCACGCCGAGTG
CGGCCAATGTGCCCGCTGCTCAGGCCATTCCGCAGGCCGGCGCGCCAGGTGCAGTGCCGGCGACCAGCACCACCGCCGCG
ACACCGGCTGCTGCCGGCGCCGCACCAGTGGTGACCCTGACCTCGGACGTGCTGCGCCTGAAGCTGGATGGCCGCAGCGT
GCTCGATGCCGAGCTGCTGCAATTCCCGCAGACCAAGGACGGCACCGCGCCGGTCAGTCTGCTGACCGAAGATCCGGCGC
ACCCGTATAACGCCACCAGCGGCTGGGCCAGCGAGCATTCGCCGGTGCCGGGCGTGGGCGGCTTCCGCGCCGAGCAGCCG
GGCACGACGTTCGACATGGCCAAGGGCCAGAACACGCTGGTGGTGCCGTTCGTCTGGAATGGCCCCGACGGCGTCTCGAT
CCGTCGCACCTTTACCCTGGAGCGCGGCCGCTATGCCATCTCGATCAAGGACGAGGTGATCAACAAGAGTGGCGCGCCGT
GGAACGGCTACGTCTTCCGCAAGCTGAGCCGGGTGCCGACCATCCTCAGCCGTGGCATGACCAATCCGGATTCCTTCAGC
TTCAATGGCGCGACCTGGTACAGCCCGCAGGAAGGCTATGAGCGCCGTGCGTTCAAGGACTACATGGACGACGGTGGCCT
GAATCGCCAGATCACCGGCGGCTGGGTGGCGCTGCTGCAGCACCACTTCTTCACCGCGTGGATTCCGCAGAAGGACCAGG
CCTCGCTGTATGTGTTGGCTCAGGACGGCCCGCGCGACGTGGCCGAGCTGCGTGGCCCGGCCTTCACCGTGGCGCCTGGC
CAGACCGCCAGCACCGAAGCGCGCCTGTGGGTGGGCCCGAAGCTGGTCAGCCTGATCGCCAAGGAAGACGTCAAGGGCCT
GGACCGCGTTGTCGATTACAGCCGCTTCTCGATCATGGCCATCATCGGCCAGGGCCTGTTTTGGGTGTTGAGCCACCTGC
ACAGCTTCCTGCACAACTGGGGCTGGGCCATCATCGGCCTGGTGGTGCTGCTGCGTCTGGCGCTGTATCCGCTGTCGGCC
GCGCAGTACAAGTCCGGCGCCAAGATGCGACGCTTCCAGCCGCGCCTGGCGCAGCTCAAGGAGCGCTACGGCGACGATCG
CGTCAAGTACCAGCAGGCGACGATGGAGCTGTTCAAGAAGGAAAAGATCAACCCGATGGGCGGCTGCCTGCCGCTACTGA
TCCAGATGCCGATCTTCTTCGCGCTGTACTGGGTGCTGGTGGAGTCGGTGGAACTGCGCCAGGCGCCGTGGCTGGGCTGG
ATCCAGGATCTGACTGCGCGCGACCCGTACTTCATCCTGCCGTTGCTCAATATCTCGATCATGTGGGCGACGCAGAAGCT
GACCCCGACCCCGGGCATGGACCCGATGCAGGCCAAGATGATGCAGTTCATGCCGCTGGTGTTCGGCGTCATGATGGCCT
TCATGCCGGCCGGCCTGGTGCTGTACTGGGTGGTCAATGGCGGCCTGGGCCTGTTGATCCAATGGTGGATGATCCGCCAG
CACGGCGAGAAGCCGAGCAAGATCATCCAGGCCAACGCCAAGTAA

Upstream 100 bases:

>100_bases
GCTGCGGCCGGCACAATGCCGCCCGCCAGGACGGTGCACCCATCCTCCCTTTCCCCGACAGAGCCGGAACTGTAGTTCCG
ACTGAGCGAGTTGCTGCCCG

Downstream 100 bases:

>100_bases
GTTCAAGAAGGCCCGCCGCAAGGCGGGCTTTCTGCATGTCAGCCCGCATTTATTGCCTGTTGTCTCTTTCGCCAAGGACG
CCGTCGTGACCACATCGCCG

Product: inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 574; Mature: 574

Protein sequence:

>574_residues
MNQTRVFLIFAWLMVAALLWMEWGKDKAAANAPVVAATQSVPAARDLDAATPSAANVPAAQAIPQAGAPGAVPATSTTAA
TPAAAGAAPVVTLTSDVLRLKLDGRSVLDAELLQFPQTKDGTAPVSLLTEDPAHPYNATSGWASEHSPVPGVGGFRAEQP
GTTFDMAKGQNTLVVPFVWNGPDGVSIRRTFTLERGRYAISIKDEVINKSGAPWNGYVFRKLSRVPTILSRGMTNPDSFS
FNGATWYSPQEGYERRAFKDYMDDGGLNRQITGGWVALLQHHFFTAWIPQKDQASLYVLAQDGPRDVAELRGPAFTVAPG
QTASTEARLWVGPKLVSLIAKEDVKGLDRVVDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIIGLVVLLRLALYPLSA
AQYKSGAKMRRFQPRLAQLKERYGDDRVKYQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWVLVESVELRQAPWLGW
IQDLTARDPYFILPLLNISIMWATQKLTPTPGMDPMQAKMMQFMPLVFGVMMAFMPAGLVLYWVVNGGLGLLIQWWMIRQ
HGEKPSKIIQANAK

Sequences:

>Translated_574_residues
MNQTRVFLIFAWLMVAALLWMEWGKDKAAANAPVVAATQSVPAARDLDAATPSAANVPAAQAIPQAGAPGAVPATSTTAA
TPAAAGAAPVVTLTSDVLRLKLDGRSVLDAELLQFPQTKDGTAPVSLLTEDPAHPYNATSGWASEHSPVPGVGGFRAEQP
GTTFDMAKGQNTLVVPFVWNGPDGVSIRRTFTLERGRYAISIKDEVINKSGAPWNGYVFRKLSRVPTILSRGMTNPDSFS
FNGATWYSPQEGYERRAFKDYMDDGGLNRQITGGWVALLQHHFFTAWIPQKDQASLYVLAQDGPRDVAELRGPAFTVAPG
QTASTEARLWVGPKLVSLIAKEDVKGLDRVVDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIIGLVVLLRLALYPLSA
AQYKSGAKMRRFQPRLAQLKERYGDDRVKYQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWVLVESVELRQAPWLGW
IQDLTARDPYFILPLLNISIMWATQKLTPTPGMDPMQAKMMQFMPLVFGVMMAFMPAGLVLYWVVNGGLGLLIQWWMIRQ
HGEKPSKIIQANAK
>Mature_574_residues
MNQTRVFLIFAWLMVAALLWMEWGKDKAAANAPVVAATQSVPAARDLDAATPSAANVPAAQAIPQAGAPGAVPATSTTAA
TPAAAGAAPVVTLTSDVLRLKLDGRSVLDAELLQFPQTKDGTAPVSLLTEDPAHPYNATSGWASEHSPVPGVGGFRAEQP
GTTFDMAKGQNTLVVPFVWNGPDGVSIRRTFTLERGRYAISIKDEVINKSGAPWNGYVFRKLSRVPTILSRGMTNPDSFS
FNGATWYSPQEGYERRAFKDYMDDGGLNRQITGGWVALLQHHFFTAWIPQKDQASLYVLAQDGPRDVAELRGPAFTVAPG
QTASTEARLWVGPKLVSLIAKEDVKGLDRVVDYSRFSIMAIIGQGLFWVLSHLHSFLHNWGWAIIGLVVLLRLALYPLSA
AQYKSGAKMRRFQPRLAQLKERYGDDRVKYQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWVLVESVELRQAPWLGW
IQDLTARDPYFILPLLNISIMWATQKLTPTPGMDPMQAKMMQFMPLVFGVMMAFMPAGLVLYWVVNGGLGLLIQWWMIRQ
HGEKPSKIIQANAK

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI223718097, Length=212, Percent_Identity=26.4150943396226, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI1790140, Length=573, Percent_Identity=36.9982547993019, Blast_Score=343, Evalue=2e-95,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019998
- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 63298; Mature: 63298

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQTRVFLIFAWLMVAALLWMEWGKDKAAANAPVVAATQSVPAARDLDAATPSAANVPAA
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHH
QAIPQAGAPGAVPATSTTAATPAAAGAAPVVTLTSDVLRLKLDGRSVLDAELLQFPQTKD
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCHHHHHHHHHCCCCCC
GTAPVSLLTEDPAHPYNATSGWASEHSPVPGVGGFRAEQPGTTFDMAKGQNTLVVPFVWN
CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEEEC
GPDGVSIRRTFTLERGRYAISIKDEVINKSGAPWNGYVFRKLSRVPTILSRGMTNPDSFS
CCCCCEEEEEEEEECCEEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
FNGATWYSPQEGYERRAFKDYMDDGGLNRQITGGWVALLQHHFFTAWIPQKDQASLYVLA
CCCEEECCCHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHEEECCCCCCCCEEEEE
QDGPRDVAELRGPAFTVAPGQTASTEARLWVGPKLVSLIAKEDVKGLDRVVDYSRFSIMA
CCCCHHHHHHCCCEEEECCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIGQGLFWVLSHLHSFLHNWGWAIIGLVVLLRLALYPLSAAQYKSGAKMRRFQPRLAQLK
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHH
ERYGDDRVKYQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWVLVESVELRQAPWLGW
HHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
IQDLTARDPYFILPLLNISIMWATQKLTPTPGMDPMQAKMMQFMPLVFGVMMAFMPAGLV
HHHHCCCCCEEEEEECCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHE
LYWVVNGGLGLLIQWWMIRQHGEKPSKIIQANAK
EEHHHHCCHHHHHHHHHHHHCCCCCHHHHCCCCC
>Mature Secondary Structure
MNQTRVFLIFAWLMVAALLWMEWGKDKAAANAPVVAATQSVPAARDLDAATPSAANVPAA
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHH
QAIPQAGAPGAVPATSTTAATPAAAGAAPVVTLTSDVLRLKLDGRSVLDAELLQFPQTKD
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCHHHHHHHHHCCCCCC
GTAPVSLLTEDPAHPYNATSGWASEHSPVPGVGGFRAEQPGTTFDMAKGQNTLVVPFVWN
CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEEEC
GPDGVSIRRTFTLERGRYAISIKDEVINKSGAPWNGYVFRKLSRVPTILSRGMTNPDSFS
CCCCCEEEEEEEEECCEEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
FNGATWYSPQEGYERRAFKDYMDDGGLNRQITGGWVALLQHHFFTAWIPQKDQASLYVLA
CCCEEECCCHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHEEECCCCCCCCEEEEE
QDGPRDVAELRGPAFTVAPGQTASTEARLWVGPKLVSLIAKEDVKGLDRVVDYSRFSIMA
CCCCHHHHHHCCCEEEECCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIGQGLFWVLSHLHSFLHNWGWAIIGLVVLLRLALYPLSAAQYKSGAKMRRFQPRLAQLK
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHH
ERYGDDRVKYQQATMELFKKEKINPMGGCLPLLIQMPIFFALYWVLVESVELRQAPWLGW
HHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
IQDLTARDPYFILPLLNISIMWATQKLTPTPGMDPMQAKMMQFMPLVFGVMMAFMPAGLV
HHHHCCCCCEEEEEECCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHE
LYWVVNGGLGLLIQWWMIRQHGEKPSKIIQANAK
EEHHHHCCHHHHHHHHHHHHCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA