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The map label for this gene is 21244954

Identifier: 21244954

GI number: 21244954

Start: 5002163

End: 5002909

Strand: Reverse

Name: 21244954

Synonym: XAC4237

Alternate gene names: NA

Gene position: 5002909-5002163 (Counterclockwise)

Preceding gene: 21244955

Following gene: 21244951

Centisome position: 96.66

GC content: 67.34

Gene sequence:

>747_bases
ATGTCCACGACCAAGTCCCGTCCGCGCGCGCCGCTCAAGGCGCCCGCGCCCAGGCTGACCGGCAACAAGCTCCCGGCCCA
GCATCGCGCGACCGAGACCTACGAACATATCCTGGCGGTCACCGCGCAATTGCTCGGCGATGTCGGCGTGGAACGGCTGT
CCACCAATCTGGTCTGTGCGCATGCCGGACTGACGCCACCGGCGCTGTACCGCTACTTTCCCAATAAATATGCGCTGTTG
TCCGAGCTCGGTACGCGCCTGATGCAGCGGCAGAACGCGCTGGTGCCCAAGTGGATCACGCCGCAGGCGATGTCCGGTTC
GCGCGAACAGGTGCAGCAGGCGCTCACCGGCCTGGTGCTGGACACCTACCGGGTGACCAAGGCCACCGAGGGCGGGGTCT
GGATCCTGCGCGCGCTGCGTGCGGTGCCGGCCTTGCAGCAGGTGCGCCTGGACTCGCACGCGCAGGTCACCAAGGCGCAG
GTGCGCATGCTCGCCGATTTCTTTCCCGATGCAGACCCGCGCCAACTGCGTCTGGTCAGCCGCATCGCGGTGGACCTGAT
CTATGCGACCGTGGAGCTGCTGTTCGATGTGCGATTGAGCAGCCGCGCGGTGGCCGAGACCGTCGGCACGATGATCGCCG
GCCACGTCGAGCAGTTGCGCGATGCAACGGCCGATGTGCCGAAAGGCAGTGCTGTGGCGCATCGGCGACACTCGCCACCG
GCACGGCGTTCAAGCCGCGCTGGGTGA

Upstream 100 bases:

>100_bases
CGCCGCCTGGCCGGCGCGATGCAGCAGCGACGCAACGGCGCAGGTGCAGTCGCGGTGGTCTGGCCGACGCATCACTCCGT
GTTCGAGGAATCCCCCGCCC

Downstream 100 bases:

>100_bases
TGGGCCGGCAGCGGGCGCGGTCGGCAGAGCTTGCGCGAAGGACGCGCCTTGCGCGCACTGAGGCGTCTGCCGGGGTGTAA
TGCCTACCCGCAGACACTGA

Product: transcriptional regulatory protein

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; TetR-Family Transcriptional Regulator

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MSTTKSRPRAPLKAPAPRLTGNKLPAQHRATETYEHILAVTAQLLGDVGVERLSTNLVCAHAGLTPPALYRYFPNKYALL
SELGTRLMQRQNALVPKWITPQAMSGSREQVQQALTGLVLDTYRVTKATEGGVWILRALRAVPALQQVRLDSHAQVTKAQ
VRMLADFFPDADPRQLRLVSRIAVDLIYATVELLFDVRLSSRAVAETVGTMIAGHVEQLRDATADVPKGSAVAHRRHSPP
ARRSSRAG

Sequences:

>Translated_248_residues
MSTTKSRPRAPLKAPAPRLTGNKLPAQHRATETYEHILAVTAQLLGDVGVERLSTNLVCAHAGLTPPALYRYFPNKYALL
SELGTRLMQRQNALVPKWITPQAMSGSREQVQQALTGLVLDTYRVTKATEGGVWILRALRAVPALQQVRLDSHAQVTKAQ
VRMLADFFPDADPRQLRLVSRIAVDLIYATVELLFDVRLSSRAVAETVGTMIAGHVEQLRDATADVPKGSAVAHRRHSPP
ARRSSRAG
>Mature_247_residues
STTKSRPRAPLKAPAPRLTGNKLPAQHRATETYEHILAVTAQLLGDVGVERLSTNLVCAHAGLTPPALYRYFPNKYALLS
ELGTRLMQRQNALVPKWITPQAMSGSREQVQQALTGLVLDTYRVTKATEGGVWILRALRAVPALQQVRLDSHAQVTKAQV
RMLADFFPDADPRQLRLVSRIAVDLIYATVELLFDVRLSSRAVAETVGTMIAGHVEQLRDATADVPKGSAVAHRRHSPPA
RRSSRAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27207; Mature: 27076

Theoretical pI: Translated: 11.14; Mature: 11.14

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTKSRPRAPLKAPAPRLTGNKLPAQHRATETYEHILAVTAQLLGDVGVERLSTNLVCA
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
HAGLTPPALYRYFPNKYALLSELGTRLMQRQNALVPKWITPQAMSGSREQVQQALTGLVL
ECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHH
DTYRVTKATEGGVWILRALRAVPALQQVRLDSHAQVTKAQVRMLADFFPDADPRQLRLVS
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
RIAVDLIYATVELLFDVRLSSRAVAETVGTMIAGHVEQLRDATADVPKGSAVAHRRHSPP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCC
ARRSSRAG
CCCCCCCC
>Mature Secondary Structure 
STTKSRPRAPLKAPAPRLTGNKLPAQHRATETYEHILAVTAQLLGDVGVERLSTNLVCA
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
HAGLTPPALYRYFPNKYALLSELGTRLMQRQNALVPKWITPQAMSGSREQVQQALTGLVL
ECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHH
DTYRVTKATEGGVWILRALRAVPALQQVRLDSHAQVTKAQVRMLADFFPDADPRQLRLVS
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
RIAVDLIYATVELLFDVRLSSRAVAETVGTMIAGHVEQLRDATADVPKGSAVAHRRHSPP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCC
ARRSSRAG
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA