| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244939
Identifier: 21244939
GI number: 21244939
Start: 4980883
End: 4981674
Strand: Reverse
Name: 21244939
Synonym: XAC4222
Alternate gene names: NA
Gene position: 4981674-4980883 (Counterclockwise)
Preceding gene: 21244940
Following gene: 21244936
Centisome position: 96.25
GC content: 68.31
Gene sequence:
>792_bases GTGCGCATGTTCAAGCCCGTCCGCCGCCTGATTGCACCGCCCTCGCAGGTTGTCGAACGCGACTGCGTGCGCGTGCAGCT GGACGGCCGCGACATCGCGGTACTGCGCGTGCGCGACCCGCGCGCGCGACGCATCAAACTGAGCGTCGACGAGCGCGGCG CACGGCTGACCTTGCCGCTGCGCGCGAGCCTGATTTCCGGCGAACGGTTTCTGCATGCGCATCTGGACTGGCTGACCACA CAGCTGTCGCGGTATCAGCAGGTCGATGCGTTTCCTGCACTTGAGCGTGGCGTGCCCGGGCAGCTGCCGTTGCGCGGTGC GTTGCTGCCGTTGAGCTGGCACGAAGGGCGCTATGCACGCATCGATATCACCGACGACGGGGCGCAGTTCCACGTGCCGA CCCGCCTGGGCGATGCAGGCCTGCGCCGCACGCTGAAGGAATTCTACGAAGCGCAGGCGCGCGCCGATGTCGGCCGTTGG TTGCCCACTTATCTGCCCGGCCTGCCGCGCGCCCCGGCGCGGCTGCGGCTGAAGATGATGTCCTCGCAGTGGGGCTCGCT GGCACCGGATGGCTCGATGGCGCTGGACCTGGCGCTGGTACTCGGCCGCCCGTCCGCGTTCGAATACGTGCTGGTGCACG AGCTCTGCCACCTGGTGCAGGCCAACCACTCGCCCGCGTTCTGGGCCGAAGTGGAGCAGCGTTTTCCCAGCTGGCGCGAG GAGCGCAGTTACTTCCACGAACACGGCCGCCAGCTCAAGGCGCAGCTGCGTCGGTTGCTGCACGCGCAGTGA
Upstream 100 bases:
>100_bases TTGTCCAATCGCTTCCAGAGACGACACCGATCACGGTCTGGCAGTCATCGAGTGCGGCAATCGACGCGTCTCACCGCCTG ACACATCGCGGCGGTATCCT
Downstream 100 bases:
>100_bases CGCAGGCGTAGCGCGCAAGGCCGCGGTGAGGCCCCGTTCGCGGCAGTGGTACGGGTGCGGCAACAGCAACAGGCGATCCA GCGAGTGGTCAGAGCTGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MRMFKPVRRLIAPPSQVVERDCVRVQLDGRDIAVLRVRDPRARRIKLSVDERGARLTLPLRASLISGERFLHAHLDWLTT QLSRYQQVDAFPALERGVPGQLPLRGALLPLSWHEGRYARIDITDDGAQFHVPTRLGDAGLRRTLKEFYEAQARADVGRW LPTYLPGLPRAPARLRLKMMSSQWGSLAPDGSMALDLALVLGRPSAFEYVLVHELCHLVQANHSPAFWAEVEQRFPSWRE ERSYFHEHGRQLKAQLRRLLHAQ
Sequences:
>Translated_263_residues MRMFKPVRRLIAPPSQVVERDCVRVQLDGRDIAVLRVRDPRARRIKLSVDERGARLTLPLRASLISGERFLHAHLDWLTT QLSRYQQVDAFPALERGVPGQLPLRGALLPLSWHEGRYARIDITDDGAQFHVPTRLGDAGLRRTLKEFYEAQARADVGRW LPTYLPGLPRAPARLRLKMMSSQWGSLAPDGSMALDLALVLGRPSAFEYVLVHELCHLVQANHSPAFWAEVEQRFPSWRE ERSYFHEHGRQLKAQLRRLLHAQ >Mature_263_residues MRMFKPVRRLIAPPSQVVERDCVRVQLDGRDIAVLRVRDPRARRIKLSVDERGARLTLPLRASLISGERFLHAHLDWLTT QLSRYQQVDAFPALERGVPGQLPLRGALLPLSWHEGRYARIDITDDGAQFHVPTRLGDAGLRRTLKEFYEAQARADVGRW LPTYLPGLPRAPARLRLKMMSSQWGSLAPDGSMALDLALVLGRPSAFEYVLVHELCHLVQANHSPAFWAEVEQRFPSWRE ERSYFHEHGRQLKAQLRRLLHAQ
Specific function: Unknown
COG id: COG1451
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30207; Mature: 30207
Theoretical pI: Translated: 10.93; Mature: 10.93
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMFKPVRRLIAPPSQVVERDCVRVQLDGRDIAVLRVRDPRARRIKLSVDERGARLTLPL CCHHHHHHHHHCCHHHHHHCCCEEEEECCCCEEEEEECCCCCEEEEEEECCCCCEEEEEH RASLISGERFLHAHLDWLTTQLSRYQQVDAFPALERGVPGQLPLRGALLPLSWHEGRYAR HHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCEEEEEEECCCCEEE IDITDDGAQFHVPTRLGDAGLRRTLKEFYEAQARADVGRWLPTYLPGLPRAPARLRLKMM EEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH SSQWGSLAPDGSMALDLALVLGRPSAFEYVLVHELCHLVQANHSPAFWAEVEQRFPSWRE HCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHH ERSYFHEHGRQLKAQLRRLLHAQ HHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRMFKPVRRLIAPPSQVVERDCVRVQLDGRDIAVLRVRDPRARRIKLSVDERGARLTLPL CCHHHHHHHHHCCHHHHHHCCCEEEEECCCCEEEEEECCCCCEEEEEEECCCCCEEEEEH RASLISGERFLHAHLDWLTTQLSRYQQVDAFPALERGVPGQLPLRGALLPLSWHEGRYAR HHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCEEEEEEECCCCEEE IDITDDGAQFHVPTRLGDAGLRRTLKEFYEAQARADVGRWLPTYLPGLPRAPARLRLKMM EEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH SSQWGSLAPDGSMALDLALVLGRPSAFEYVLVHELCHLVQANHSPAFWAEVEQRFPSWRE HCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHH ERSYFHEHGRQLKAQLRRLLHAQ HHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA