| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244936
Identifier: 21244936
GI number: 21244936
Start: 4977561
End: 4978466
Strand: Reverse
Name: 21244936
Synonym: XAC4219
Alternate gene names: NA
Gene position: 4978466-4977561 (Counterclockwise)
Preceding gene: 21244939
Following gene: 21244935
Centisome position: 96.19
GC content: 67.88
Gene sequence:
>906_bases ATGCCTCGTTTGTCGCGCCTGGCCCTGTTGTTGTCGCTGACGTTGGCCGCCGGCCATGCCGTCGCCGGCCCGGAAGAAGA CCAGCGTGCACGAAATGCGGTGCGTGTGCTGACCGAGATCATGAAGATCCCCGAGCAGGCCATTCCGGACAAACTGCTCG ACGAGGCGCGCGCCATCGTGGTCATTCCCGACACGCTGAAGGCCGGCCTGGTGATCGGCGGCCGTCGCGGCCACGGACTG ATGTCGATGAAGAATGCCGATGGCAGCTGGTCGCAACCGGTGTTCGTCAAGCTGACTGGCGGCAGCATCGGCTTCCAGGC CGGCGTGCAGTCGTCCGACGTGGTGCTGGTGTTCCGCAACGACCGCAGCCTGGACAACATCGTCAACGGCAAGTTCACCC TTGGCGCCGATGCCGGCGTGGCCGCAGGCCCGGTCGGGCGCAACGCCGCTGCGGCTACCGATGGTCAGCTCAAGGCCGAA ATCTGGTCATGGTCGCGTGCCCGTGGCCTGTTCGCCGGGGTTGCGCTGGACGGTGCGGTCCTGCAGATCGACGATGCCGC CGACCTCAATGCCTATGGCGGTGGCGCGACCCCGCGCATGATTTTCGAGGGCCGCACCAGCGAACGCCCGTCCACCGATG TGATCGCCTTCCGCGACCGGCTGGAAAAGGCCACCTACACCGCGCGCGCCAATCGCGGCACCGATGCCGCCGCCGATGAC GCGCCGCCGGCACCGCGTCCGCAAACCCCGCCGCCGGCGCAGGCACAGCAACCGGCCACTGTGCCTCCGGCCAACGAAGC CAGCACCGTGCCGATGCAGCCCAGCGCCATGCCGCCGGCCCAGCAAGGTTTCCAGCCGGTATCGGAGGGCGAAATCCGCA CCGAATCCCTAGACGGCAACCGCTAA
Upstream 100 bases:
>100_bases GCCGTCTCTTCCATGCCGGTTGCGCTCACCACCGATTCATTGCGCCGGCACTACCGTCGCGGCATTGCTATCTTTAACGG ATTCTTCCTTGGAGCTTGTC
Downstream 100 bases:
>100_bases CGCACTGTCATCCCCCTGCGCGGTGCGCTGGGGTATCCTGCGTCTTCCTTCTTTTCAGCAAGCGAGCAGATCATGGGCGG TTTCAGCATTTGGCACTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MPRLSRLALLLSLTLAAGHAVAGPEEDQRARNAVRVLTEIMKIPEQAIPDKLLDEARAIVVIPDTLKAGLVIGGRRGHGL MSMKNADGSWSQPVFVKLTGGSIGFQAGVQSSDVVLVFRNDRSLDNIVNGKFTLGADAGVAAGPVGRNAAAATDGQLKAE IWSWSRARGLFAGVALDGAVLQIDDAADLNAYGGGATPRMIFEGRTSERPSTDVIAFRDRLEKATYTARANRGTDAAADD APPAPRPQTPPPAQAQQPATVPPANEASTVPMQPSAMPPAQQGFQPVSEGEIRTESLDGNR
Sequences:
>Translated_301_residues MPRLSRLALLLSLTLAAGHAVAGPEEDQRARNAVRVLTEIMKIPEQAIPDKLLDEARAIVVIPDTLKAGLVIGGRRGHGL MSMKNADGSWSQPVFVKLTGGSIGFQAGVQSSDVVLVFRNDRSLDNIVNGKFTLGADAGVAAGPVGRNAAAATDGQLKAE IWSWSRARGLFAGVALDGAVLQIDDAADLNAYGGGATPRMIFEGRTSERPSTDVIAFRDRLEKATYTARANRGTDAAADD APPAPRPQTPPPAQAQQPATVPPANEASTVPMQPSAMPPAQQGFQPVSEGEIRTESLDGNR >Mature_300_residues PRLSRLALLLSLTLAAGHAVAGPEEDQRARNAVRVLTEIMKIPEQAIPDKLLDEARAIVVIPDTLKAGLVIGGRRGHGLM SMKNADGSWSQPVFVKLTGGSIGFQAGVQSSDVVLVFRNDRSLDNIVNGKFTLGADAGVAAGPVGRNAAAATDGQLKAEI WSWSRARGLFAGVALDGAVLQIDDAADLNAYGGGATPRMIFEGRTSERPSTDVIAFRDRLEKATYTARANRGTDAAADDA PPAPRPQTPPPAQAQQPATVPPANEASTVPMQPSAMPPAQQGFQPVSEGEIRTESLDGNR
Specific function: Unknown
COG id: COG2930
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI227430336, Length=238, Percent_Identity=28.9915966386555, Blast_Score=95, Evalue=9e-20, Organism=Homo sapiens, GI227430338, Length=238, Percent_Identity=28.9915966386555, Blast_Score=95, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6321804, Length=220, Percent_Identity=30.9090909090909, Blast_Score=83, Evalue=6e-17, Organism=Saccharomyces cerevisiae, GI6321137, Length=192, Percent_Identity=31.7708333333333, Blast_Score=80, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31556; Mature: 31425
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLSRLALLLSLTLAAGHAVAGPEEDQRARNAVRVLTEIMKIPEQAIPDKLLDEARAIV CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCHHHHHCCCEEE VIPDTLKAGLVIGGRRGHGLMSMKNADGSWSQPVFVKLTGGSIGFQAGVQSSDVVLVFRN EECCCCCCCEEEECCCCCCEEEEECCCCCCCCCEEEEECCCCCCEECCCCCCCEEEEEEC DRSLDNIVNGKFTLGADAGVAAGPVGRNAAAATDGQLKAEIWSWSRARGLFAGVALDGAV CCCHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEHHHHCCHHHHHEEEEEEECCEE LQIDDAADLNAYGGGATPRMIFEGRTSERPSTDVIAFRDRLEKATYTARANRGTDAAADD EEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC APPAPRPQTPPPAQAQQPATVPPANEASTVPMQPSAMPPAQQGFQPVSEGEIRTESLDGN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCCC R C >Mature Secondary Structure PRLSRLALLLSLTLAAGHAVAGPEEDQRARNAVRVLTEIMKIPEQAIPDKLLDEARAIV CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCHHHHHCCCEEE VIPDTLKAGLVIGGRRGHGLMSMKNADGSWSQPVFVKLTGGSIGFQAGVQSSDVVLVFRN EECCCCCCCEEEECCCCCCEEEEECCCCCCCCCEEEEECCCCCCEECCCCCCCEEEEEEC DRSLDNIVNGKFTLGADAGVAAGPVGRNAAAATDGQLKAEIWSWSRARGLFAGVALDGAV CCCHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEHHHHCCHHHHHEEEEEEECCEE LQIDDAADLNAYGGGATPRMIFEGRTSERPSTDVIAFRDRLEKATYTARANRGTDAAADD EEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC APPAPRPQTPPPAQAQQPATVPPANEASTVPMQPSAMPPAQQGFQPVSEGEIRTESLDGN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA