| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244906
Identifier: 21244906
GI number: 21244906
Start: 4927472
End: 4927831
Strand: Reverse
Name: 21244906
Synonym: XAC4189
Alternate gene names: NA
Gene position: 4927831-4927472 (Counterclockwise)
Preceding gene: 21244907
Following gene: 21244900
Centisome position: 95.21
GC content: 63.89
Gene sequence:
>360_bases ATGCCGCGTCTTTGTTATGTGCTTGATATACACGACGATGCGGCGCTGATCGCCGAATACGAGCGCTGGCATCAGCCCAC CGAGGTGTGGCCGGAGGTAGTGGCCTCGCTGCAGCAGGCCGGCATTCTGGAATTGGAGATCTTTCGCAGCGGCGACCGGC TGGTGATGCTGATGGAGGTGCGCGAGGACTACGATCCGGCCGCCAAGGCCGCACGCGATGCAGCCGACCCGCGCATCCAG GCGTGGGAGCAGTTGATGTGGCGGTTTCAGAAGCCGCTGCCTGGCAGTAAGCAGGGAGAAAAATGGCGGCAGGCCGGACT GATCTTTGCGCTGGGCGAGGCGATCGCCGCGCAGCGCTAG
Upstream 100 bases:
>100_bases TCCACTGGGCGATGGTGGTGCCGGGTGCGTGCTTTGCGGTGATCTTGTCGTTCGCGTTGCGCGCCCGCCGCGCGGTGCCC GTCGTTGCAGGAGCCTGAGC
Downstream 100 bases:
>100_bases GCCGCGCCCTCATCCGCCCTGCGGGCACCTTCTCCCGCAGGCGGGAGAAGGGCGTGATCCGGCTCACGTGGGAGAAGGGC GTGATCTGGCGCAGGTGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MPRLCYVLDIHDDAALIAEYERWHQPTEVWPEVVASLQQAGILELEIFRSGDRLVMLMEVREDYDPAAKAARDAADPRIQ AWEQLMWRFQKPLPGSKQGEKWRQAGLIFALGEAIAAQR
Sequences:
>Translated_119_residues MPRLCYVLDIHDDAALIAEYERWHQPTEVWPEVVASLQQAGILELEIFRSGDRLVMLMEVREDYDPAAKAARDAADPRIQ AWEQLMWRFQKPLPGSKQGEKWRQAGLIFALGEAIAAQR >Mature_118_residues PRLCYVLDIHDDAALIAEYERWHQPTEVWPEVVASLQQAGILELEIFRSGDRLVMLMEVREDYDPAAKAARDAADPRIQA WEQLMWRFQKPLPGSKQGEKWRQAGLIFALGEAIAAQR
Specific function: Unknown
COG id: COG3254
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13689; Mature: 13558
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLCYVLDIHDDAALIAEYERWHQPTEVWPEVVASLQQAGILELEIFRSGDRLVMLMEV CCCEEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEH REDYDPAAKAARDAADPRIQAWEQLMWRFQKPLPGSKQGEKWRQAGLIFALGEAIAAQR HCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PRLCYVLDIHDDAALIAEYERWHQPTEVWPEVVASLQQAGILELEIFRSGDRLVMLMEV CCEEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEH REDYDPAAKAARDAADPRIQAWEQLMWRFQKPLPGSKQGEKWRQAGLIFALGEAIAAQR HCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA