| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244840
Identifier: 21244840
GI number: 21244840
Start: 4842304
End: 4842852
Strand: Reverse
Name: 21244840
Synonym: XAC4123
Alternate gene names: NA
Gene position: 4842852-4842304 (Counterclockwise)
Preceding gene: 21244841
Following gene: 21244839
Centisome position: 93.57
GC content: 72.86
Gene sequence:
>549_bases ATGAGCGCGCCCACGCTCTCGCTGGCGCAGGCCTGTGCGCAGATGCAGTTGTCTGCGCCCGCCTGCGCGCAGCTTAGTAC GCCGATCGCGCCGCAAGCGGCGGTCGGCGCGCTGCTGGCCAGCGGTCATGGCGAAGATGCCATCAAGCTGCTCGCGCGCC TGCTGCCCAAGCGCTACGCGGTGGCCTGGCTGTGCCAATGCGTGCGCGGCGAAACCCTGGACGAGGAAGACCGTGCCGGC GCGGCACTGGCCGAGAAGTGGGTGCGCGAGCCCAGCGAGGCGCATCGTCGCGCCGCGCAGGCATTTGCGCATGCCGGCGG CTATGTCTCCCTGGGTGCGTGGCTGGCGGCGGCAGTGGCCTGGTCCGGCGGCAGCCTAGCGCCGCCGCATCAGACCACGC CCGTGCCGCCGGCCGACCATCTCACTGCGCGCGCGGTGGCCGCCGCCATCACCTTGCTGGCCGCGCGCGAGCCGGCGCAG CTGGAAGCGCGGCGCAGCGGCTATGCAGCGCATGCCATGGAGCTGCTGACCAGTGTGGGGGCGCCATGA
Upstream 100 bases:
>100_bases TCAGTGCCGAAGCCGGTGCCTCGGCCACGCTCAAGGGTCCTTTGGTCAGCATCAAGGCCGACGCCTTGGTGCAGGTCGGC GGCGGCCTGATCATGATCGG
Downstream 100 bases:
>100_bases AGCCGCCTGATCGCCGAACGGGCGGGGTCGATTGCGCCGATGGCCGTTGGCGTTTGGCTGCGCGTGCGGGTGCGCTGTCC ACGCGCGGAAACGGCGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MSAPTLSLAQACAQMQLSAPACAQLSTPIAPQAAVGALLASGHGEDAIKLLARLLPKRYAVAWLCQCVRGETLDEEDRAG AALAEKWVREPSEAHRRAAQAFAHAGGYVSLGAWLAAAVAWSGGSLAPPHQTTPVPPADHLTARAVAAAITLLAAREPAQ LEARRSGYAAHAMELLTSVGAP
Sequences:
>Translated_182_residues MSAPTLSLAQACAQMQLSAPACAQLSTPIAPQAAVGALLASGHGEDAIKLLARLLPKRYAVAWLCQCVRGETLDEEDRAG AALAEKWVREPSEAHRRAAQAFAHAGGYVSLGAWLAAAVAWSGGSLAPPHQTTPVPPADHLTARAVAAAITLLAAREPAQ LEARRSGYAAHAMELLTSVGAP >Mature_181_residues SAPTLSLAQACAQMQLSAPACAQLSTPIAPQAAVGALLASGHGEDAIKLLARLLPKRYAVAWLCQCVRGETLDEEDRAGA ALAEKWVREPSEAHRRAAQAFAHAGGYVSLGAWLAAAVAWSGGSLAPPHQTTPVPPADHLTARAVAAAITLLAAREPAQL EARRSGYAAHAMELLTSVGAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18741; Mature: 18609
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPTLSLAQACAQMQLSAPACAQLSTPIAPQAAVGALLASGHGEDAIKLLARLLPKRYA CCCCHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH VAWLCQCVRGETLDEEDRAGAALAEKWVREPSEAHRRAAQAFAHAGGYVSLGAWLAAAVA HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH WSGGSLAPPHQTTPVPPADHLTARAVAAAITLLAAREPAQLEARRSGYAAHAMELLTSVG HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCC AP CC >Mature Secondary Structure SAPTLSLAQACAQMQLSAPACAQLSTPIAPQAAVGALLASGHGEDAIKLLARLLPKRYA CCCHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH VAWLCQCVRGETLDEEDRAGAALAEKWVREPSEAHRRAAQAFAHAGGYVSLGAWLAAAVA HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH WSGGSLAPPHQTTPVPPADHLTARAVAAAITLLAAREPAQLEARRSGYAAHAMELLTSVG HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCC AP CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA