| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244799
Identifier: 21244799
GI number: 21244799
Start: 4784364
End: 4786163
Strand: Reverse
Name: 21244799
Synonym: XAC4082
Alternate gene names: NA
Gene position: 4786163-4784364 (Counterclockwise)
Preceding gene: 77748754
Following gene: 21244798
Centisome position: 92.48
GC content: 64.61
Gene sequence:
>1800_bases ATGAGCGTGCGTATCGAGGATCACGCCATGCTGGGCAACTGCCACAGCGCGGCCCTGGTCGACCACCGCGGCACCATCGG CTGGCTGTGCCTGCCACGCTTCGATTCCGATGCGGTGTTCGCTGCGTTGCTGGGCGATCAACAACACGGGCAATGGGCGT TGTCGCCGGCCGCCGACTTCCGTACCGAGCGCGCCTACCAGGACGATAGTCTGGTGCTGTGCACGCGCATGATCACCGAC AGCGGCACGGTGGAACTGATCGACTTCATGGTCGCCAGCGAAAACGGCGAAGTCCATCAGCATCTGGTGCGTATCGTGCG CTGCGTGCAGGGCAGCGTGCCCATGCACATGCGCCTGACCTTCCGCTTCAACTACGGCCGCACCGTGCCATGGGTGACGC GTATCGTCGATGGTATCCGCGCCATCGCCGGCCCCGATCAACTGGCCTTGCGTTCGCCGCAGACGCTGCGCGGCCAGGAC ATGGGCACCGAAACCGACTTCACCCTGCGCGAAGGGCAAAGCACCTGGTTCCTGCTCAGCCACGGCGCATCCCATCAAGC CACGCCGCCTTTGATCGACGCCGAACAGGCACTGCAACGCACCACCGCGTTCTGGCACGGCTGGGCGCGCCGCTGTACCG ATGTCGGGCCATGGACCGAGCAGGTGCGCCGCTCGCTGGTGGTGCTGAAGGGGCTGAGTTATCTGCCCACCGGCGGCATC GTCGCCGCGCCCACTGCCTCGTTGCCGGAGCATCTGGGCGGCACCCGTAACTGGGACTATCGCTACTGCTGGCTGCGCGA TTCGGTGTTCACGCTGATCGCGTTGCTGCAGGCCGGGTACCGCGACGAAGCGGCGGCATTTCGCGATTGGGTCCAACGCA CCATTGCCGGTTCGCCGGATCAATTGCAGGCGCTGTACGGCATTGCCGGCGAACGCCGCTTGCAGGAATGGGAAGCGCAC TGGCTGCCCGGCTATGAACATTCCGGCCCGGTGCGCATCGGCAACGGCGCGGTGGATCAGTTCCAGCTCGATGTGTATGG CGAGTTGATCGGTGCGTTTCATTACGCACGCGAAAAAGGCGTGGGCCTGCCGTCGGACGATGACGGTTCGTCTGCATCGC TGCTGGAAAAGATTCTGGAAACCCTGGAAACCCTCTGGCGCGAACCTGACGAAGGCATCTGGGAAATCCGCGACGAGCGC CGCCACTTCGTGCATTCCAAGGTGATGGCCTGGCTGGCCTTCGACTGCGGCGCGCGCGACGGCATCACCAACGCAGAGGC TGAAAAACGCGCGCACTGGGGCCGCATTGCCGAAGAAATCCGCGCGCAAGTGCTGGAAAAAGGCGTGCACCCGGACGGCC ACTTCGTGCAGAGCTATGGCTCGGATCGGCTGGATGCCTCGCTGCTGCTGATTCCCATCGTGGGCTTTCTGCCGCCGGAC GATCCGCGCATCGCCGCAACTGTCGATGCGATCGCGCGCGATCTGACCATCGACGGGTTGGTCGAGCGCTATCGCGCCGA CGACAGCGCCGACGGCCTGCCGGCCGGCGAAGGCACCTTCCTGGCCTGCAGTTTCTGGCTGGTGGAAAATTATGCCTTGA TCGGCCGCACCGACCAGGCGCGTGCGCTGCTCGAACGCCTGCTCGGGCTGTGCAACGACGTGGGCCTGCTCGCCGAAGAA TACGATCCGCGCAGCAAACGCATGCTCGGCAACTTCCCGCAAGGGTATTCCCACGTGGCCCTGGTCAATGCGGCACTGCG CCTGCATGGACGCATGGGCGAAAAGGAAACGCATCCATGA
Upstream 100 bases:
>100_bases GGTGCCACCGCTGCTGGGTCTACCGGCGCAGTCGTAACCTGATCCCGACACGGCCCATGCAAGACTGCGCGTTCTTTCGC CGGAAGGAAGCGCCCACCCA
Downstream 100 bases:
>100_bases GTGAGCAAGCAACCACACCGCCGTGCATCATCGTGGTGTTCGGCGCACGCGGCGATCTGACCAAGCGCCTGGTCATGCCG GCGCTGTACAACCTGCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Hydrolase; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Glycoside Hydrolase Family; Glucoamylase; Glycoside Hydrolase Family Protein; Trehalose-Phosphatase; Glucoamylase-Like Glycosyl Hydrolase; Trehalose Phosphatase; Glycosyl Hydrolase Glucoamylase; Glucoamylase Or Related Glycosyl Hydrolase; Six-Hairpin Glycosidase-Like Protein; Trehalose-Phosphatase/Glycoside Hydrolase; Glucoamylase Or Related Glycosyl Hydrolase Protein; Hydrolase; Glycosyl Hydrolase Glycosyl Hydrolase Family; Glycosyl Hydrolase Protein; Trehalose-6-Phosphate Phophatase
Number of amino acids: Translated: 599; Mature: 598
Protein sequence:
>599_residues MSVRIEDHAMLGNCHSAALVDHRGTIGWLCLPRFDSDAVFAALLGDQQHGQWALSPAADFRTERAYQDDSLVLCTRMITD SGTVELIDFMVASENGEVHQHLVRIVRCVQGSVPMHMRLTFRFNYGRTVPWVTRIVDGIRAIAGPDQLALRSPQTLRGQD MGTETDFTLREGQSTWFLLSHGASHQATPPLIDAEQALQRTTAFWHGWARRCTDVGPWTEQVRRSLVVLKGLSYLPTGGI VAAPTASLPEHLGGTRNWDYRYCWLRDSVFTLIALLQAGYRDEAAAFRDWVQRTIAGSPDQLQALYGIAGERRLQEWEAH WLPGYEHSGPVRIGNGAVDQFQLDVYGELIGAFHYAREKGVGLPSDDDGSSASLLEKILETLETLWREPDEGIWEIRDER RHFVHSKVMAWLAFDCGARDGITNAEAEKRAHWGRIAEEIRAQVLEKGVHPDGHFVQSYGSDRLDASLLLIPIVGFLPPD DPRIAATVDAIARDLTIDGLVERYRADDSADGLPAGEGTFLACSFWLVENYALIGRTDQARALLERLLGLCNDVGLLAEE YDPRSKRMLGNFPQGYSHVALVNAALRLHGRMGEKETHP
Sequences:
>Translated_599_residues MSVRIEDHAMLGNCHSAALVDHRGTIGWLCLPRFDSDAVFAALLGDQQHGQWALSPAADFRTERAYQDDSLVLCTRMITD SGTVELIDFMVASENGEVHQHLVRIVRCVQGSVPMHMRLTFRFNYGRTVPWVTRIVDGIRAIAGPDQLALRSPQTLRGQD MGTETDFTLREGQSTWFLLSHGASHQATPPLIDAEQALQRTTAFWHGWARRCTDVGPWTEQVRRSLVVLKGLSYLPTGGI VAAPTASLPEHLGGTRNWDYRYCWLRDSVFTLIALLQAGYRDEAAAFRDWVQRTIAGSPDQLQALYGIAGERRLQEWEAH WLPGYEHSGPVRIGNGAVDQFQLDVYGELIGAFHYAREKGVGLPSDDDGSSASLLEKILETLETLWREPDEGIWEIRDER RHFVHSKVMAWLAFDCGARDGITNAEAEKRAHWGRIAEEIRAQVLEKGVHPDGHFVQSYGSDRLDASLLLIPIVGFLPPD DPRIAATVDAIARDLTIDGLVERYRADDSADGLPAGEGTFLACSFWLVENYALIGRTDQARALLERLLGLCNDVGLLAEE YDPRSKRMLGNFPQGYSHVALVNAALRLHGRMGEKETHP >Mature_598_residues SVRIEDHAMLGNCHSAALVDHRGTIGWLCLPRFDSDAVFAALLGDQQHGQWALSPAADFRTERAYQDDSLVLCTRMITDS GTVELIDFMVASENGEVHQHLVRIVRCVQGSVPMHMRLTFRFNYGRTVPWVTRIVDGIRAIAGPDQLALRSPQTLRGQDM GTETDFTLREGQSTWFLLSHGASHQATPPLIDAEQALQRTTAFWHGWARRCTDVGPWTEQVRRSLVVLKGLSYLPTGGIV AAPTASLPEHLGGTRNWDYRYCWLRDSVFTLIALLQAGYRDEAAAFRDWVQRTIAGSPDQLQALYGIAGERRLQEWEAHW LPGYEHSGPVRIGNGAVDQFQLDVYGELIGAFHYAREKGVGLPSDDDGSSASLLEKILETLETLWREPDEGIWEIRDERR HFVHSKVMAWLAFDCGARDGITNAEAEKRAHWGRIAEEIRAQVLEKGVHPDGHFVQSYGSDRLDASLLLIPIVGFLPPDD PRIAATVDAIARDLTIDGLVERYRADDSADGLPAGEGTFLACSFWLVENYALIGRTDQARALLERLLGLCNDVGLLAEEY DPRSKRMLGNFPQGYSHVALVNAALRLHGRMGEKETHP
Specific function: Unknown
COG id: COG3387
COG function: function code G; Glucoamylase and related glycosyl hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66818; Mature: 66687
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVRIEDHAMLGNCHSAALVDHRGTIGWLCLPRFDSDAVFAALLGDQQHGQWALSPAADF CCEEECCCHHHCCCCHHHEECCCCCEEEEEECCCCCCHHHHHHHCCCCCCCEEECCHHHH RTERAYQDDSLVLCTRMITDSGTVELIDFMVASENGEVHQHLVRIVRCVQGSVPMHMRLT HHHHCCCCCCEEEEEHHHCCCCCCEEEHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEE FRFNYGRTVPWVTRIVDGIRAIAGPDQLALRSPQTLRGQDMGTETDFTLREGQSTWFLLS EEECCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCEEECCCCEEEEEE HGASHQATPPLIDAEQALQRTTAFWHGWARRCTDVGPWTEQVRRSLVVLKGLSYLPTGGI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCE VAAPTASLPEHLGGTRNWDYRYCWLRDSVFTLIALLQAGYRDEAAAFRDWVQRTIAGSPD EECCCCCCHHHCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHH QLQALYGIAGERRLQEWEAHWLPGYEHSGPVRIGNGAVDQFQLDVYGELIGAFHYAREKG HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCC VGLPSDDDGSSASLLEKILETLETLWREPDEGIWEIRDERRHFVHSKVMAWLAFDCGARD CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC GITNAEAEKRAHWGRIAEEIRAQVLEKGVHPDGHFVQSYGSDRLDASLLLIPIVGFLPPD CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHEEHHHHCCCCC DPRIAATVDAIARDLTIDGLVERYRADDSADGLPAGEGTFLACSFWLVENYALIGRTDQA CCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHCCCEECCCHHH RALLERLLGLCNDVGLLAEEYDPRSKRMLGNFPQGYSHVALVNAALRLHGRMGEKETHP HHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SVRIEDHAMLGNCHSAALVDHRGTIGWLCLPRFDSDAVFAALLGDQQHGQWALSPAADF CEEECCCHHHCCCCHHHEECCCCCEEEEEECCCCCCHHHHHHHCCCCCCCEEECCHHHH RTERAYQDDSLVLCTRMITDSGTVELIDFMVASENGEVHQHLVRIVRCVQGSVPMHMRLT HHHHCCCCCCEEEEEHHHCCCCCCEEEHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEE FRFNYGRTVPWVTRIVDGIRAIAGPDQLALRSPQTLRGQDMGTETDFTLREGQSTWFLLS EEECCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCEEECCCCEEEEEE HGASHQATPPLIDAEQALQRTTAFWHGWARRCTDVGPWTEQVRRSLVVLKGLSYLPTGGI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCE VAAPTASLPEHLGGTRNWDYRYCWLRDSVFTLIALLQAGYRDEAAAFRDWVQRTIAGSPD EECCCCCCHHHCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHH QLQALYGIAGERRLQEWEAHWLPGYEHSGPVRIGNGAVDQFQLDVYGELIGAFHYAREKG HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCC VGLPSDDDGSSASLLEKILETLETLWREPDEGIWEIRDERRHFVHSKVMAWLAFDCGARD CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC GITNAEAEKRAHWGRIAEEIRAQVLEKGVHPDGHFVQSYGSDRLDASLLLIPIVGFLPPD CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHEEHHHHCCCCC DPRIAATVDAIARDLTIDGLVERYRADDSADGLPAGEGTFLACSFWLVENYALIGRTDQA CCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHCCCEECCCHHH RALLERLLGLCNDVGLLAEEYDPRSKRMLGNFPQGYSHVALVNAALRLHGRMGEKETHP HHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA