| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is zwf [H]
Identifier: 21244798
GI number: 21244798
Start: 4782529
End: 4784367
Strand: Reverse
Name: zwf [H]
Synonym: XAC4081
Alternate gene names: 21244798
Gene position: 4784367-4782529 (Counterclockwise)
Preceding gene: 21244799
Following gene: 21244795
Centisome position: 92.44
GC content: 65.31
Gene sequence:
>1839_bases ATGAGTGAGCAAGCAACCACACCGCCGTGCATCATCGTGGTGTTCGGCGCACGCGGCGATCTGACCAAGCGCCTGGTCAT GCCGGCGCTGTACAACCTGCGCCGTTCCGGTGCGCTGGGCGATGATTTCGCCATTGTCGGCATGGACCATGGCGACATCA GCGAGCGCGCCTGGCGGACCAACATGGGGCAGTCGATGACGCAGCTGCTCAGCAGCCGCGATGCCGAATTCCAGACCGAC GAATTCGACACCGCCACCTGGGACTGGCTGCGCGAACGCATGCATTACCTGCGCGGCGACTTCACCGATCAGGGAGCCTA TCGATCGCTGGGCGGCGTGCTGGACAAGCTGCACAAGCGCTACGGCACGCAGGGCAATGTGCTGTTCTATCTGGCCACCG CCGCGCGCTTCTTCGAGCCGGTATTGCTCAACCTGGGCGAGGCTGGCCTGGTCAAGCAGCGCGAAGGCGAAGGCTGGCGC CGGGTCATCGTGGAAAAACCCTTCGGCTACGATCTGCCCAGCGCCCAGCACCTCAATGCCACGGTCGCCAAGGTGCTGCA CGAGGATCAGGTGTTCCGCATCGATCATTTCCTGGGCAAGGAAACCGTGCAGAACATTCTCGCGTTCCGCTTCGCCAATG GCTTGTTCGAACCGGTGTGGAACCGCGACCGCATCGACCATGTGCAGATCACCGCGGCCGAAACCATCGGAGTGGAAGGG CGCGGACGGTTCTACGACCCCACCGGCTGCCTGCGCGACATGGTGCCGAACCATCTGTTCCAGCTGCTGGCGATGATTGC GATGGAGCCGCCAGCGGCCTTCACCACCGAGGCGATGCATCGCCGTCGCGCCGAAGTGATCGAAGCGGTGCGCCCGATCA AACCCGAAGACGTGGTGCGCGGGCAATACGCCTCCGGTGCGGTCAATCGCAATGCGGTGCCGGGTTATCGCGAAGAAGAC ACCGTGCCCGACGATTCGGACACCGAAACCTATGTGGCGATGAAGCTACAGGTGGACACCTGGCGCTGGGCCGGCGTGCC GTTCTACCTGCGCACCGGTAAGCGCCTGCGCGAACGCACGACCGAGATCGCCATTCGCTTCAAGCCGGCACCGCTGGCGC CCTTCCGCAGTACCGAGGTGGGCGGCTACGGCCCCGACTGGCTGGTGCTGCATATCCAGCCGGACGAGGGCATCTCGCTG CAGTTCGACGTCAAGCGTCCGGGCGCGCAGGTGGCACTGGCACCGGTGCGCATGGACTTCCGTTACCGCGACTGGTTCCC CAAGGAATACACGGTGGGCTACGAGCGCCTGCTGCAGGACTGCATGAACGGCGAAGCCGGCTTGTTCCAGGATGCGGCCA TGGTGGAAGGCGCATGGCGCATCGTGCAACCGATCCTGGATGCATGGAAACAACCCCCAAGCGACTTCCCCAATTACGCC GCCGGCAGCGCCGGCCCTTCGGCTGCCGATGCACTACTGGCAATGAATGGCGGACACGCCTGGCGCGCACTCACCCCAGG GCGCAAGCCGCCACCGCGCCGGCCGCCGGAAGCGCGTGCTGGCGCTGCCGCGCCGATTAAGAAAACCACCGGCAAATCTG CCAAGAAGGCCGCCAAGGCGCCGGCCGAGAAGGTCACCAAGGCGCCAGCCAGACGCGCATCTGCGGCTTCAGCAAGACCA TCGCAGGATGCGGCTACGTCGCCTAGCAGCGCGGCCAGGAAGGCCGTGAGCAAACGCGTAACCGGCAAGGTCGCAAAGGC CGCCGGCAAAACCGCGGCAGGCAAGGGCGCAGCGAAGAAGTCGGCCAGCAAGACCGTGGCGCGCACGCCACGCCGCTGA
Upstream 100 bases:
>100_bases AACGCATGCTCGGCAACTTCCCGCAAGGGTATTCCCACGTGGCCCTGGTCAATGCGGCACTGCGCCTGCATGGACGCATG GGCGAAAAGGAAACGCATCC
Downstream 100 bases:
>100_bases CCGAGGCGAGCGGCCTACAGCCGCCGCAGCGCCACGTAGGAGCGTGCCTGCGCGCGACGTGCTTTGCCGGTAACGCCCGG GGCGCGCGCAGGCACGCTCC
Product: glucose-6-phosphate 1-dehydrogenase
Products: NA
Alternate protein names: G6PD [H]
Number of amino acids: Translated: 612; Mature: 611
Protein sequence:
>612_residues MSEQATTPPCIIVVFGARGDLTKRLVMPALYNLRRSGALGDDFAIVGMDHGDISERAWRTNMGQSMTQLLSSRDAEFQTD EFDTATWDWLRERMHYLRGDFTDQGAYRSLGGVLDKLHKRYGTQGNVLFYLATAARFFEPVLLNLGEAGLVKQREGEGWR RVIVEKPFGYDLPSAQHLNATVAKVLHEDQVFRIDHFLGKETVQNILAFRFANGLFEPVWNRDRIDHVQITAAETIGVEG RGRFYDPTGCLRDMVPNHLFQLLAMIAMEPPAAFTTEAMHRRRAEVIEAVRPIKPEDVVRGQYASGAVNRNAVPGYREED TVPDDSDTETYVAMKLQVDTWRWAGVPFYLRTGKRLRERTTEIAIRFKPAPLAPFRSTEVGGYGPDWLVLHIQPDEGISL QFDVKRPGAQVALAPVRMDFRYRDWFPKEYTVGYERLLQDCMNGEAGLFQDAAMVEGAWRIVQPILDAWKQPPSDFPNYA AGSAGPSAADALLAMNGGHAWRALTPGRKPPPRRPPEARAGAAAPIKKTTGKSAKKAAKAPAEKVTKAPARRASAASARP SQDAATSPSSAARKAVSKRVTGKVAKAAGKTAAGKGAAKKSASKTVARTPRR
Sequences:
>Translated_612_residues MSEQATTPPCIIVVFGARGDLTKRLVMPALYNLRRSGALGDDFAIVGMDHGDISERAWRTNMGQSMTQLLSSRDAEFQTD EFDTATWDWLRERMHYLRGDFTDQGAYRSLGGVLDKLHKRYGTQGNVLFYLATAARFFEPVLLNLGEAGLVKQREGEGWR RVIVEKPFGYDLPSAQHLNATVAKVLHEDQVFRIDHFLGKETVQNILAFRFANGLFEPVWNRDRIDHVQITAAETIGVEG RGRFYDPTGCLRDMVPNHLFQLLAMIAMEPPAAFTTEAMHRRRAEVIEAVRPIKPEDVVRGQYASGAVNRNAVPGYREED TVPDDSDTETYVAMKLQVDTWRWAGVPFYLRTGKRLRERTTEIAIRFKPAPLAPFRSTEVGGYGPDWLVLHIQPDEGISL QFDVKRPGAQVALAPVRMDFRYRDWFPKEYTVGYERLLQDCMNGEAGLFQDAAMVEGAWRIVQPILDAWKQPPSDFPNYA AGSAGPSAADALLAMNGGHAWRALTPGRKPPPRRPPEARAGAAAPIKKTTGKSAKKAAKAPAEKVTKAPARRASAASARP SQDAATSPSSAARKAVSKRVTGKVAKAAGKTAAGKGAAKKSASKTVARTPRR >Mature_611_residues SEQATTPPCIIVVFGARGDLTKRLVMPALYNLRRSGALGDDFAIVGMDHGDISERAWRTNMGQSMTQLLSSRDAEFQTDE FDTATWDWLRERMHYLRGDFTDQGAYRSLGGVLDKLHKRYGTQGNVLFYLATAARFFEPVLLNLGEAGLVKQREGEGWRR VIVEKPFGYDLPSAQHLNATVAKVLHEDQVFRIDHFLGKETVQNILAFRFANGLFEPVWNRDRIDHVQITAAETIGVEGR GRFYDPTGCLRDMVPNHLFQLLAMIAMEPPAAFTTEAMHRRRAEVIEAVRPIKPEDVVRGQYASGAVNRNAVPGYREEDT VPDDSDTETYVAMKLQVDTWRWAGVPFYLRTGKRLRERTTEIAIRFKPAPLAPFRSTEVGGYGPDWLVLHIQPDEGISLQ FDVKRPGAQVALAPVRMDFRYRDWFPKEYTVGYERLLQDCMNGEAGLFQDAAMVEGAWRIVQPILDAWKQPPSDFPNYAA GSAGPSAADALLAMNGGHAWRALTPGRKPPPRRPPEARAGAAAPIKKTTGKSAKKAAKAPAEKVTKAPARRASAASARPS QDAATSPSSAARKAVSKRVTGKVAKAAGKTAAGKGAAKKSASKTVARTPRR
Specific function: Pentose phosphate pathway; first step. [C]
COG id: COG0364
COG function: function code G; Glucose-6-phosphate 1-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucose-6-phosphate dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI109389365, Length=490, Percent_Identity=34.2857142857143, Blast_Score=283, Evalue=2e-76, Organism=Homo sapiens, GI108773793, Length=490, Percent_Identity=34.2857142857143, Blast_Score=283, Evalue=3e-76, Organism=Homo sapiens, GI52145310, Length=371, Percent_Identity=30.9973045822102, Blast_Score=160, Evalue=3e-39, Organism=Escherichia coli, GI1788158, Length=505, Percent_Identity=37.6237623762376, Blast_Score=338, Evalue=4e-94, Organism=Caenorhabditis elegans, GI17538218, Length=505, Percent_Identity=33.4653465346535, Blast_Score=295, Evalue=4e-80, Organism=Saccharomyces cerevisiae, GI6324088, Length=489, Percent_Identity=33.7423312883436, Blast_Score=263, Evalue=6e-71, Organism=Drosophila melanogaster, GI24643350, Length=504, Percent_Identity=32.3412698412698, Blast_Score=264, Evalue=1e-70, Organism=Drosophila melanogaster, GI24643352, Length=504, Percent_Identity=32.3412698412698, Blast_Score=263, Evalue=3e-70, Organism=Drosophila melanogaster, GI221513548, Length=484, Percent_Identity=29.9586776859504, Blast_Score=204, Evalue=2e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001282 - InterPro: IPR019796 - InterPro: IPR022675 - InterPro: IPR022674 - InterPro: IPR016040 [H]
Pfam domain/function: PF02781 G6PD_C; PF00479 G6PD_N [H]
EC number: =1.1.1.49 [H]
Molecular weight: Translated: 67614; Mature: 67482
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQATTPPCIIVVFGARGDLTKRLVMPALYNLRRSGALGDDFAIVGMDHGDISERAWRT CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHH NMGQSMTQLLSSRDAEFQTDEFDTATWDWLRERMHYLRGDFTDQGAYRSLGGVLDKLHKR HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH YGTQGNVLFYLATAARFFEPVLLNLGEAGLVKQREGEGWRRVIVEKPFGYDLPSAQHLNA HCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHH TVAKVLHEDQVFRIDHFLGKETVQNILAFRFANGLFEPVWNRDRIDHVQITAAETIGVEG HHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHCCCCC RGRFYDPTGCLRDMVPNHLFQLLAMIAMEPPAAFTTEAMHRRRAEVIEAVRPIKPEDVVR CCCEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHC GQYASGAVNRNAVPGYREEDTVPDDSDTETYVAMKLQVDTWRWAGVPFYLRTGKRLRERT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCEEECCCCCEECCCHHHHHHH TEIAIRFKPAPLAPFRSTEVGGYGPDWLVLHIQPDEGISLQFDVKRPGAQVALAPVRMDF HEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCEEEEEEEECC RYRDWFPKEYTVGYERLLQDCMNGEAGLFQDAAMVEGAWRIVQPILDAWKQPPSDFPNYA CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC AGSAGPSAADALLAMNGGHAWRALTPGRKPPPRRPPEARAGAAAPIKKTTGKSAKKAAKA CCCCCCHHHHHEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHCC PAEKVTKAPARRASAASARPSQDAATSPSSAARKAVSKRVTGKVAKAAGKTAAGKGAAKK CHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH SASKTVARTPRR HHHHHHHCCCCC >Mature Secondary Structure SEQATTPPCIIVVFGARGDLTKRLVMPALYNLRRSGALGDDFAIVGMDHGDISERAWRT CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHH NMGQSMTQLLSSRDAEFQTDEFDTATWDWLRERMHYLRGDFTDQGAYRSLGGVLDKLHKR HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH YGTQGNVLFYLATAARFFEPVLLNLGEAGLVKQREGEGWRRVIVEKPFGYDLPSAQHLNA HCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHH TVAKVLHEDQVFRIDHFLGKETVQNILAFRFANGLFEPVWNRDRIDHVQITAAETIGVEG HHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHCCCCC RGRFYDPTGCLRDMVPNHLFQLLAMIAMEPPAAFTTEAMHRRRAEVIEAVRPIKPEDVVR CCCEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHC GQYASGAVNRNAVPGYREEDTVPDDSDTETYVAMKLQVDTWRWAGVPFYLRTGKRLRERT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCEEECCCCCEECCCHHHHHHH TEIAIRFKPAPLAPFRSTEVGGYGPDWLVLHIQPDEGISLQFDVKRPGAQVALAPVRMDF HEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCEEEEEEEECC RYRDWFPKEYTVGYERLLQDCMNGEAGLFQDAAMVEGAWRIVQPILDAWKQPPSDFPNYA CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC AGSAGPSAADALLAMNGGHAWRALTPGRKPPPRRPPEARAGAAAPIKKTTGKSAKKAAKA CCCCCCHHHHHEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHCC PAEKVTKAPARRASAASARPSQDAATSPSSAARKAVSKRVTGKVAKAAGKTAAGKGAAKK CHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH SASKTVARTPRR HHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]